function [T,Y]=outbreak(xo,param_ini,param_fin,tfin)

%
% Demonstrate the insect outbreak
%
% Usage: [T,Y]=outbreak(x0,[k_ini,r_ini],[k_fin,r_fin],tfin);
%
% Example:
%
%clear
%global r_ini r_fin k_ini k_fin tfin aa;
%k_ini=1;k_fin=5;r_ini=0.5;r_fin=1;
%k_ini=15;k_fin=15;r_ini=0.6;r_fin=0.025;
%k_ini=15;k_fin=15;r_ini=0.2;r_fin=0.8;
%%k_ini=15;k_fin=15;r_ini=0.530;r_fin=0.555;
%tfin=5000;
%[T,Y]=outbreak(1,[k_ini,r_ini],[k_fin,r_fin],tfin);
%
global r_ini r_fin k_ini k_fin tfin aa;
format compact;
options= odeset('Reltol',1.e-5);
%options= odeset('Reltol',1.e-3,'Outputfincn','odephas3','Refine',4);
lw=2;
fs=16;
fs2=19;
k_ini=param_ini(1);
k_fin=param_fin(1);
r_ini=param_ini(2);
r_fin=param_fin(2);
IC=[xo];
tspan=[0 tfin];
%aa=0.001;
aa=5/tfin;
[T,Y]=ode45(@outbreak_eqns,tspan,IC,options);
R=(r_ini+(r_fin-r_ini)/2)+(r_fin-r_ini)*tanh(aa*(T-tfin/2))/2;
K=(k_ini+(k_fin-k_ini)/2)+(k_fin-k_ini)*tanh(aa*(T-tfin/2))/2;
% ploting the orbit
figure(1); clf
set(gca,'FontSize',fs)
subplot(2,1,1)
plot(T,Y,'-o','LineWidth',lw)
xlabel('t','FontSize',fs2); ylabel('x','FontSize',fs2)
title('Insect Outbreak','FontSize',fs2)
set(gca,'FontSize',fs)
subplot(2,2,3)
plot(T,R,'-','LineWidth',lw)
axis tight
hold on
plot(T,R*0+0.5373,'--r','LineWidth',lw)
plot(T,R*0+0.2628,'--r','LineWidth',lw)
xlabel('t','FontSize',fs2); ylabel('r','FontSize',fs2)
set(gca,'FontSize',fs)

subplot(2,2,4)
plot(T,K,'-','LineWidth',lw)
xlabel('t','FontSize',fs2); ylabel('k','FontSize',fs2)
set(gca,'FontSize',fs)
hold off
figure(2); clf
set(gca,'FontSize',fs)
xx=[1.025:0.01:3,3:21];
subplot(1,1,1)
rr=2*xx.^3./((1+xx.^2).^2);
kk=2*xx.^3./(xx.^2-1);
plot(kk,rr,'--r','LineWidth',lw)
hold on
plot(K,R,'-bo','LineWidth',lw)
plot(K(1),R(1),'*r','LineWidth',lw)
axis tight;
axis([0 40 0 0.8]);
xlabel('k','FontSize',fs2); ylabel('r','FontSize',fs2)
title('Parameter Diagram','FontSize',fs2)
set(gca,'FontSize',fs)
figure(3);clf
x=[0:0.25*2:25];
r=[0:0.01*2:1];
k=[0.25:0.125*2:18];
[RR,KK,XX]=meshgrid(r,k,x);
RHS=RR.*(1-XX./KK)-XX./(1+XX.^2);
plotisosurface(RR,KK,XX,RHS,0,'red');
view([-50 35])
hold on
mm=max(x)/10000;
plot3(R,K,Y+mm,'o-')
plot3(R,K,Y-mm,'o-')
hold off
xlabel('r','FontSize',fs2);
ylabel('k','FontSize',fs2)
zlabel('x','FontSize',fs2)
title('Orbit','FontSize',fs2)
set(gca,'FontSize',fs)
box on
grid on
axis tight
return;
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% Differential equations defining the Lorenz system
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
function F=outbreak_eqns(t,vec)
global r_ini r_fin k_ini k_fin tfin aa;
%r=r_ini+(r_fin-r_ini)*t/tfin;
%k=k_ini+(k_fin-k_ini)*t/tfin;

r=(r_ini+(r_fin-r_ini)/2)+(r_fin-r_ini)*tanh(aa*(t-tfin/2))/2;
k=(k_ini+(k_fin-k_ini)/2)+(k_fin-k_ini)*tanh(aa*(t-tfin/2))/2;
x=vec(1);
F = r*x*(1-x/k)-x^2/(1+x^2);
return;