LOCUS

AY904401
1387 bp
DNA
linear PLN 31-MAY-2005
DEFINITION Peltophorum pterocarpum voucher Grierson & Long 2884
ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
(rbcL) gene, partial cds; chloroplast.
ACCESSION AY904401
VERSION
AY904401.1 GI:66735806
KEYWORDS
.
SOURCE
chloroplast Peltophorum pterocarpum
ORGANISM Peltophorum pterocarpum
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; fabids; Fabales; Fabaceae; Caesalpinioideae;
Caesalpinieae; Peltophorum.
REFERENCE 1 (bases 1 to 1387)
AUTHORS Haston,E.M., Lewis,G.P. and Hawkins,J.A.
TITLE
A phylogenetic reappraisal of the Peltophorum group (Caesalpinieae:
Leguminosae) based on the chloroplast trnL-F, rbcL and rps16
sequence data
JOURNAL Am. J. Bot. 92 (8), 1359-1371 (2005)
PUBMED 21646156
REFERENCE 2 (bases 1 to 1387)
AUTHORS Haston,E.M., Lewis,G.P. and Hawkins,J.A.
TITLE
Direct Submission
JOURNAL Submitted (25-JAN-2005) Tropical Diversity, The Royal Botanic
Garden Edinburgh, 21a Inverleith Row, Edinburgh EH3 5LR, United
Kingdom
FEATURES
Location/Qualifiers
source
1..1387
/organism="Peltophorum pterocarpum"
/organelle="plastid:chloroplast"
/mol_type="genomic DNA"
/specimen_voucher="Grierson & Long 2884"
/db_xref="taxon:162876"
/note="authority: Peltophorum pterocarpum (DC.)Backer ex
K.Heyne"
gene
<1..>1387
/gene="rbcL"
CDS
<1..>1387
/gene="rbcL"
/codon_start=3
/transl_table=11
/product="ribulose-1,5-bisphosphate carboxylase/oxygenase
large subunit"
/protein_id="AAY54108.1"
/db_xref="GI:66735807"
/translation="PQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQP
GVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQYIAYVAYP
LDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRILXGYSXTFQGPPHGIQVERDKL
NKYGCPLLGCTIKLKLGLSAKNYGRAVYECLXGGXDFTKDDENVNSQPFMRWRDRFLF
CAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANT
SLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLE
GEREITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVIPVASGGIHVWHMPALTEIF
GDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIREASKWS
PELAAACEVGR"
misc_feature
63..1379
/gene="rbcL"
/note="Ribulose bisphosphate carboxylase large chain, Form
I; Region: RuBisCO_large_I; cd08212"
/db_xref="CDD:173977"
misc_feature
3..1379

misc_feature

misc_feature

misc_feature

misc_feature

misc_feature

/gene="rbcL"
/note="ribulose-1,5-bisphosphate carboxylase/oxygenase
large subunit; Region: rbcL; CHL00040"
/db_xref="CDD:176981"
order(174..176,189..194,363..365,513..515,519..521,
525..527,603..608,876..881,975..977,996..1001,1131..1139,
1203..1208)
/gene="rbcL"
/note="active site"
/db_xref="CDD:173977"
603..608
/gene="rbcL"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:173977"
597..599
/gene="rbcL"
/note="catalytic residue [active]"
/db_xref="CDD:173977"
order(129..131,174..176,180..185,189..212,219..221,
234..236,312..326,330..332,336..341,348..353,357..365,
369..380,384..392,519..533,606..611,615..629,633..635,
723..740,753..755,798..800,807..809,813..824,828..833,
876..878,882..887,891..899,903..908,915..923,987..1004,
1137..1145,1206..1211,1215..1226,1230..1235)
/gene="rbcL"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:173977"
order(462..464,477..479,483..497,576..584,672..674,
681..701,768..770,783..785,861..863,1185..1187,1224..1229,
1239..1241,1248..1250,1257..1262,1269..1274,1281..1283,
1287..1295,1347..1349,1353..1355)
/gene="rbcL"
/note="heterodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:173977"

ORIGIN
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261

caccacaaac
tgacttatta
taactcctca
ctactggtac
gacgatgcta
cttatccctt
gtaatgtatt
ntggttattc
tgaacaagta
ctaagaatta
atgatgagaa
ccgaagctat
ctactgcagg
ttcctatcgt
attattgccg
atagacagaa
gtggagatca
ctttaggctt
tttatttcac
ttcacgtttg
tcggtggagg
tagctctaga

agaaactaaa
tactcctgac
acctggagtt
atggacaact
ccacatcgag
agaccttttt
tggattcaag
twaaactttc
tgggtgtccc
cggtagagca
tgtgaattcc
ttataaagca
tacatgcgaa
aatgcatgac
ggataatggt
gaatcatggt
tattcacgct
tgttgattta
tcaggattgg
gcatatgcct
aactttaggg
agcatgtgta

gcaagtgttg
tatgaaacca
ccgcctgaag
gtgtggaccg
cccgttgctg
gaagaaggtt
gccctgcgcg
caaggtccgc
ctattgggat
gtttatgaat
caaccattta
caggccgaaa
gaaatgatca
tacttaacag
ctacttcttc
atgcactttc
ggtaccgtag
ctacgtgatg
gtctctctac
gctcttaccg
cacccttggg
caggctcgta

ggttcaaagc
aagatactga
aagcaggtgc
atgggcttac
gagaagaaaa
ctgttactaa
ctctacgttt
ctcacggcat
gtactattaa
gtcttygcgg
tgcgttggag
caggtgaaat
aaagagctgt
ggggattcac
atatccatcg
gtgtactagc
taggtaaact
attttattga
cgggtgttat
agatctttgg
gaaatgcacc
atgagggacg

tggtgttaaa
tatcttggca
cgcggtagct
cagtcttgat
tcaatatatt
catgtttact
ggaggatttg
ccaagttgag
acttaaattg
tggasttgat
agaccgtttc
caaagggcat
atttgcccga
tgcaaatact
tgcaatgcat
taaagcgtta
tgaaggggaa
aaaagatcga
acccgttgct
agatgattcc
tggtgccgta
tgatcttgct

gattataaat
gcattccgag
gctgaatctt
cgttacaaag
gcttatgtag
tccattgtgg
cgaatcctta
agagataaat
gggttatccg
tttaccaaag
ttattttgtg
tacttgaatg
gaattgggcg
agcttggctc
gcagttatcg
cgtttgtctg
agagagatca
agccgcggta
tcggggggta
gtactacaat
gctaatcgag
cgtgagggta

1321 atgagattat tcgtgaggct agcaaatgga gtcctgaatt agctgctgct tgtgaagtag

1381 gaaggag
//