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Basic Chemistry
Biochemistry: Essentials for Life
• Organic compounds
• Contain carbon
• Most are covalently bonded
• Example: C6H12O6 (glucose)
• Inorganic compounds
• Lack carbon
• Tend to be simpler compounds
• Example: H2O (water)
Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings Slide 2.21
Important Inorganic Compounds
• Water
• Most abundant inorganic compounds
• Vital properties
• High heat capacity
• Polarity/solvent properties
• Chemical reactivity
• Cushioning
Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings Slide 2.22
Important Inorganic Compounds
• Salts
• Easily dissociate into ions in the
presence of water
• Vital to many body functions
• Include electrolytes which conduct
electrical currents
• Acids
• Can release detectable hydrogen ions
• Bases
• Proton acceptors
• Neutralization reaction
• Acids and bases react to form water and a
salt
Figure 2.12a, b
Figure 2.12c
• Lipids
• Contain carbon, hydrogen, and oxygen
• Carbon and hydrogen outnumber oxygen
• Insoluble in water
Slide
Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings
2.30a
Important Organic Compounds
Figure 2.14a, b
Figure 2.14c
• Proteins
• Made of amino acids
• Contain carbon, oxygen, hydrogen,
nitrogen, and sometimes sulfur
Slide
Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings
2.33a
Important Organic Compounds
Slide
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2.33b
Enzymes
• Act as biological catalysts
• Increase the rate of chemical reactions
Figure 2.16
• Deoxyribonucleic
acid (DNA)
• Organized by
complimentary bases
to form double helix
• Replicates before
cell division
• Provides instruction
for every protein in
the body Figure 2.17c
Figure 2.18a
Figure 3.1a
Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings Slide 3.2
The Nucleus
• Control center
of the cell
• Contains genetic
material (DNA)
• Three regions
• Nuclear
membrane
• Nucleolus
• Chromatin Figure 3.1b
Figure 3.4
• Types of diffusion
• Simple diffusion
• Unassisted process
• Solutes are lipid-soluble materials or
small enough to pass through membrane
pores
Slide
Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings
3.24a
Passive Transport Processes
• Types of diffusion
• Osmosis – simple diffusion of water
• Highly polar water easily crosses the
plasma membrane
• Facilitated diffusion
• Substances require a protein carrier for
passive transport
Slide
Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings
3.24b
Diffusion through the Plasma
Membrane
Figure 3.9
• Filtration
• Water and solutes are forced through a
membrane by fluid, or hydrostatic pressure
• A pressure gradient must exist
• Solute-containing fluid is pushed from a
high pressure area to a lower pressure
area
• Solute pumping
• Amino acids, some sugars and ions are
transported by solute pumps
• ATP energizes protein carriers, and in most
cases, moves substances against
concentration gradients
Slide
Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings
3.28a
Active Transport Processes
• Bulk transport
• Exocytosis
• Moves materials out of the cell
• Material is carried in a membranous vesicle
• Vesicle migrates to plasma membrane
• Vesicle combines with plasma membrane
• Material is emptied to the outside
Slide
Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings
3.29a
Active Transport Processes
• Bulk transport
• Endocytosis
• Extracellular substances are engulfed by
being enclosed in a membranous
vescicle
• Types of endocytosis
• Phagocytosis – cell eating
• Pinocytosis – cell drinking
Slide
Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings
3.30a
Cell Life Cycle
• Cells have two major periods
• Interphase
• Cell grows
• Cell carries on metabolic processes
• Cell division
• Cell replicates itself
• Function is to produce more cells for
growth and repair processes
Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings Slide 3.31
DNA Replication
• Genetic material
duplicated and
readies a cell for
division into two cells
• Occurs toward the
end of interphase
• DNA uncoils and
each side serves
as a template
Figure 3.13
Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings Slide 3.32
Events of Cell Division
• Mitosis
• Division of the nucleus
• Results in the formation of two daughter
nuclei
• Cytokinesis
• Division of the cytoplasm
• Begins when mitosis is near completion
• Results in the formation of two daughter
cells
Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings Slide 3.33
Stages of Mitosis
• Interphase
• No cell division occurs
• The cell carries out normal metabolic
activity and growth
• Prophase
• First part of cell division
• Centromeres migrate to the poles
Slide
Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings
3.34a
Stages of Mitosis
• Metaphase
• Spindle from centromeres are attached to
chromosomes that are aligned in the center
of the cell
Slide
Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings
3.34b
Stages of Mitosis
• Anaphase
• Daughter chromosomes are pulled toward
the poles
• The cell begins to elongate
• Telophase
• Daughter nuclei begin forming
• A cleavage furrow (for cell division) begins
to form
Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings Slide 3.35
Stages of Mitosis
Figure 3.14; 1
Slide
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3.36a
Stages of Mitosis
Figure 3.14; 2
Slide
Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings
3.36b
Protein Synthesis