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THE JOURNAL OF BIOLOGICAL CHEMISTRY Vol. 272, No. 33, Issue of August 15, pp. 2031320316, 1997 Printed in U.S.A.
REACTION 2
Protein Fragmentation The generation of alkoxyl radicals (Fig. 1, Reactions h and g) sets the stage for cleavage of the peptide bond by either the diamide or -amidation pathways. Upon cleavage by the diamide pathway (Fig. 2, Pathway a), the peptide fragment derived from the N-terminal portion of the protein possesses a diamide structure at the C-terminal end, whereas the peptide derived from the C-terminal portion of the protein possesses an isocyanate structure at the N-terminal end. In contrast, upon cleavage by the -amidation pathway (Fig. 2, Pathway b), the peptide fragment obtained from the N-terminal portion of the protein possesses an amide group at the C-terminal end, whereas the N-terminal amino acid residue of the fragment derived from the C-terminal portion of the protein exists as an N--ketoacyl derivative. Upon acid hydrolysis, the peptide fragments obtained by the diamide pathway will yield CO2, NH3, and a free carboxylic acid, whereas hydrolysis of the fragment obtained by the -amidation pathway yields NH3 and a free -ketocarboxylic acid. Peptide bond cleavage can occur also as a result of ROS attack of glutamyl, aspartyl, and prolyl side chains. As described by Garrison (2), OH-dependent abstraction of a hydrogen atom from the -carbon atom of a glutamyl residue, followed by reactions analogous to Reactions d, f, and h in Fig. 1, will lead eventually to peptide bond cleavage by a mechanism in which oxalic acid is formed and the N-terminal amino acid of the peptide derived from the C-terminal portion of the protein will exist as an N-pyruvyl derivative (Reaction 3). Based on the observation that the number of peptides formed during radiolysis of proteins is approximately equal to the number of prolyl residues, Schuessler and Schilling (4) proposed that oxidation of prolyl residues would lead to peptide bond cleavage. This was verified by studies of Uchida et al. (5) showing that oxidation of proline residues leads to the formation of 2-pyrrolidone and concomitant peptide bond cleavage (Reaction 4). Because acid hydrolysis of 2-pyrrolidone yields 4-aminobutyric acid, the presence of 4-aminobutyric acid in protein hydrolysates is presumptive evidence for peptide bond cleavage by the proline oxidation pathway. Oxidation of Amino Acid Side Chains All amino acid residues of proteins are susceptible to oxidation by OH. However, the products formed in the oxidation of some residues have not been fully characterized. Table I lists some of the products formed during the oxidation of the residues that are most susceptible to oxidation. Oxidation of Sulfur-containing Amino Acid ResiduesCysteine and methionine residues are particularly sensitive to oxidation by almost all forms of ROS. Under even mild conditions cysteine residues are converted to disulfides and methionine residues are converted to methionine sulfoxide (MeSOX) residues. Most biological systems contain disulfide reductases and MeSOX reductases that can convert the oxidized forms of cysteine and methionine residues back to their unmodified forms. These are the only oxidative modifications of proteins that can be repaired. Based on the observation that preferential oxidation of several exposed methionine residues in some proteins has little effect on their biological function, it was proposed that the cyclic oxidation-reduction of methionine residues serves as a built-in ROS scavenger system to protect such proteins from more extensive irreversible oxidative modifications (6). This proposition is supported by results of recent studies showing that a knock-out strain of yeast lacking MeSOX reductase is more sensitive to H2O2 toxicity than the wild-type strain and that, when grown in the presence of H2O2, the protein and free amino acid pool of the mutant strain contain higher levels
REACTION 1
Moreover, in the absence of oxygen, when Reaction d in Fig. 1 is prevented, the carbon-centered radical may react with another carbon-centered radical to form a protein-protein cross-linked derivative (Reaction 2).
* This minireview will be reprinted in the 1997 Minireview Compendium, which will be available in December, 1997. This is the fourth article of five in the Oxidative Modification of Macromolecules Minireview Series. To whom correspondence should be addressed: Laboratory of Biochemistry, Bldg. 3, Rm. 222, NHLBI, National Institutes of Health, Bethesda, MD 20892. Tel.: 301-496-4096; Fax: 301-496-0599. 1 The abbreviations used are: ROS, reactive oxygen species; MeSOX, methionine sulfoxide reductase; PN, peroxynitrite; GS, glutamine synthetase. 2 For review, see Donald C. Borg and Karen M. Schaich (1988) in Oxygen Radicals and Tissue Injury (Halliwell, B., ed) pp. 20 26, Proceedings of an Upjohn Symposium, Federation of American Societies for Experimental Biology, Bethesda, MD. This paper is available on line at http://www.jbc.org
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FIG. 2. Peptide bond cleavage by the (a) diamide and (b) -amidation pathways.
REACTION 3
REACTION 4
of MeSOX than are present in the wild type strain.3 Aromatic Amino Acid ResiduesAromatic amino acid residues are among the preferred targets for ROS attack. As shown in Table I, tryptophan residues are readily oxidized to formylkynurenine and kynurenine and to various hydroxy derivatives; phenylalanine and tyrosine residues yield a number of hydroxy derivatives; histidine residues are converted to 2-oxohistidine, asparagine, and aspartic acid residues. Reactions with PeroxynitriteWith the discovery that nitric oxide is a normal product of arginine metabolism and that it reacts . to form peroxynitrite (Reaction 5), the biological rapidly with O2 effects of peroxynitrite (PN) have been extensively studied.
. NO 3 ONOO O2 REACTION 5
Methionine and cysteine residues of proteins are particularly vulnerable to oxidation by PN, and tyrosine and tryptophan residues are selective targets for PN-dependent nitration. The nitration of tyrosine residues may be of singular importance since nitration precludes the ability of tyrosine residues to undergo cyclic
3 J. Moskovitz, B. S. Berlett, M. J. Poston, R. L. Levine, and E. R. Stadtman, unpublished results.
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Disulfides, cysteic acid Methionine sulfoxide, methionine sulfone 2-, 4-, 5-, 6-, and 7-Hydroxytryptophan, nitrotryptophan, kynurenine, 3-hydroxykynurinine, formylkynurinine 2,3-Dihydroxyphenylalanine, 2-, 3-, and 4-hydroxyphenylalanine 3,4-Dihydroxyphenylalanine, tyrosine-tyrosine cross-linkages, Tyr-O-Tyr, cross-linked nitrotyrosine 2-Oxohistidine, asparagine, aspartic acid Glutamic semialdehyde -Aminoadipic semialdehyde 2-Pyrrolidone, 4- and 5-hydroxyproline pyroglutamic acid, glutamic semialdehyde 2-Amino-3-ketobutyric acid Oxalic acid, pyruvic acid
Protein Oxidation and DiseaseAccumulation of oxidized protein (protein carbonyls) is associated with a number of diseases, including amyotrophic lateral sclerosis, Alzheimers disease, respiratory distress syndrome, muscular dystrophy, cataractogenesis, rheumatoid arthritis, progeria, and Werners syndrome.4 Although the level of carbonyl has not been directly determined, there is reason to believe that oxidative modification of proteins is implicated also in atherosclerosis, diabetes, Parkinsons disease, essential hypertension, cystic fibrosis, and ulcerative colitis.4
SCHEME 1
FIG. 3. Formation of protein carbonyls by glycation, glycoxidation, and by reactions with peroxidation products of polyunsaturated fatty acids (PUFA). A, reactions of sugars with protein lysyl amino groups (P-NH2). B, Michael addition of 4-hydroxy-2-nonenal to protein lysine (PNH2), histidine (P-His), or cysteine (PSH) residues. C, reaction of protein amino groups (PNH2) with the lipid peroxidation product, malondialdehyde.
indicated by the facts. (a) In vitro exposure of enzymes to ROS elicits changes in catalytic activity, heat stability, and proteolytic susceptibility similar to those that occur during aging (2730). (b) Brief exposure of animals to oxidative stress leads to alterations in enzymes similar to that associated with aging (31, 32). (c) Old animals are more susceptible than young animals to protein damage during oxidative stress, e.g. x-radiation, H2O2 (33, 34). (d) There is an age-related increase in the carbonyl content of protein in human brain (35), gerbil brain (36), eye lens (37), rat hepatocytes (32), whole body protein of flies (38), and human red blood cells (28). (e) The carbonyl content of protein in cultured human fibroblasts increases exponentially as a function of the age of the fibroblast donor (28). (f) There is an inverse relationship between regimens that lead to an increase in life span and regimens that lead to an increase in protein carbonyl content and vice versa (39). For example, diet (caloric) restriction of rats (39) and mice (40) leads to an increase in life span and to a decrease in the level of protein carbonyls. When compared at the same chronological age, strains of short lived houseflies contain higher levels of oxidized proteins than their longer lived cohorts (41).
Accumulation of Oxidized Protein The intracellular level of oxidized protein reflects the balance between the rate of protein oxidation and the rate of oxidized protein degradation. This balance is a complex function of numerous factors that lead to the generation of ROS, on the one hand, and of multiple factors that determine the concentrations and/or activities of the proteases that degrade oxidatively damaged protein, on the other. As illustrated in Fig. 4, many different physiological and environmental processes lead to the formation of ROS. Collectively, these processes can promote the generation of a battery of ROS, . , R, ROO, RO, NO, including a number of free radicals (OH, O2 RS, ROS, RSOO, and RSSR . ), various non-radical oxygen derivatives (H2O2, ROOH, 1O2, O3, HOCl, ONOO, ONOCO 2, O2NOCO 2 , N2O2, NO2 , and highly reactive lipid- or carbohydratederived carbonyl compounds, viz. 4-hydroxy-2-nonenal, malondialdehyde ketoamines, ketoaldehydes, and deoxyosones. Any one of these ROS is capable of promoting the modification of proteins. However, as shown in Fig. 4, their abilities to do so are dependent upon the concentrations of a myriad of enzymic and non-enzymic factors (antioxidants) that can either inhibit the formation of ROS or facilitate their conversion to inactive derivatives. For example, . formed by several pro-oxidant systems shown in Fig. 4 is the O2 readily converted to H2O2 by the action of superoxide dismutase. This H2O2 together with H2O2 produced by various oxidases and metal-catalyzed oxidation systems is readily degraded by catalase, glutathione peroxidase, thiol-specific antioxidant enzymes, and other peroxidases. However, if in the course of metabolism the concentrations of these antioxidant activities become insufficient to decompose all of the H2O2 formed, the H2O2 may undergo metal ion-catalyzed cleavage by the Fenton reaction to generate the even more toxic OH. This reaction is dependent upon the availability of iron and copper, which is determined by the concentrations of metal-binding proteins (ferritin, transferrin, lactoferrin, and ceruloplasmin), and of multiple factors (iron-responsive elements, etc.) that control the intracellular concentrations of these proteins, as well as factors that influence the binding and/or the release of metal ions from these binding proteins. The level of ROS is also a function of the concentrations of vitamins (A, C, and E) and of metabolites (uric acid, bilirubin, etc.) that are capable of either scavenging free radicals directly or of facilitating the regeneration of metabolites that do so. Finally, metal ion chelators can either suppress or enhance the rates of ROS generation by forming complexes with iron or copper that inhibit their ability to catalyze ROS formation or alter their redox potentials and therefore their ability to undergo cyclic interconversion between oxidized and reduced states. Furthermore, other divalent cations (Mg2, Mn2, and Zn2) may compete with Fe(II) or Cu(I) for binding to metal binding sites on proteins and thereby prevent site-specific generation of OH, which is likely the most important mechanism of protein damage (42). In addition, Mn(II) is able to inhibit the reduction of Fe(III) to Fe(II) (43) and thus
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FIG. 4. Accumulation of oxidized protein is dependent upon the balance between pro-oxidant, antioxidant, and proteolytic activities. MSR, methionine sulfoxide reductase; GPx, glutathione peroxidase; CAT, catalase; RSH-Px, thiol-specific peroxidase; NOS, nitric oxide synthetase; SOD, superoxide dismutase; GST, glutathione transferase.
prevent its ability to promote formation of OH by the Fenton reaction as well as the generation of other forms of ROS as illustrated in Fig. 1. As noted above, the accumulation of oxidized protein reflects not only the rate of protein oxidation but also the rate of oxidized protein degradation, which (as shown in Fig. 4) is also dependent upon many variables, including the concentrations of proteases that preferentially degrade oxidized proteins and numerous factors (metal ions, inhibitors, activators, and regulatory proteins) that affect their proteolytic activities. For example, oxidized forms of some proteins (e.g. cross-linked proteins (44 46)) and proteins modified by glycation (47) or lipid peroxidation products (44) are not only resistant to proteolysis but, in fact, can inhibit the ability of proteases to degrade the oxidized forms of other proteins (44, 48). The foregoing discussion and some of the points illustrated in Fig. 4 are by no means comprehensive. They are intended to call attention to the extraordinary complexity of ROS biochemistry. Numerous other factors not discussed are certainly important in determining the steady-state level of oxidative damage under varying physiological and environmental conditions. It is our belief that during aging there is a progressive accumulation of errors at the level of DNA that affect any one or more of the factors that govern the dynamics of protein oxidation and oxidized protein degradation. This leads to a shift in the balance between these processes in favor of oxidized protein accumulation and attendant loss of biological function. Two observations are consistent with this hypothesis. (a) The level of oxidized protein in cultured fibroblasts is a function of the age of the fibroblast donor and is independent of the cell passage number. (b) Chronic injection of the free radical scavenger tert-butyl--phenylnitrone leads to a reversal of some agerelated changes in the gerbil brain, but when the tert-butyl-phenylnitrone treatment is discontinued the age-related changes reappear (36). Both observations indicate that the level of oxidative damage is determined by the genetic make-up of the cell, which changes with age. According to this proposition, the aged phenotype could be expressed (a) by a single point mutation that could impair a biological activity that occupies a central role in biological functions, such an alteration of helicase as occurs in Werners syndrome (49), or (b) by the accumulation over time of numerous errors leading to deficiencies in the synthesis and/or activities of a multiplicity of the factors that govern the balance between protein oxidation and degradation. From this perspective, aging could be looked upon as a degenerative process (disease?) that might include aberrations that contribute to the development of other pathologies, such as Alzheimers disease, amyotrophic lateral sclerosis, diabetes, etc., in which the accumulation of oxidatively modified protein has been demonstrated. Perhaps in these diseases one or more of the