Professional Documents
Culture Documents
REGULATORY OVERVIEW
Protein Products
Where is it Written?
U.S. FDA quality practices approved by Congress and enforceable by law (thou shalt).
Guidance for Industry (GFI)
Information from FDA on recommended activities to satisfy specific CFR requirements (how to.)
Compliance Policy Guidance (CPG)
Guidance to FDA reviewers/inspectors on what to look for in product submissions and manufacturing operations
(did they)
Where is it Written?
Veterinary Use : Good Manufacturing Practice; Commission Directive 2003/94/EC (thou shalt) Types or Operational Elements (how to) Annex 1 = Sterile Medicinal Products Annex 2 = Biological Medicinal Products Annex 11 = Computerized Systems Annex 13 = Investigational Medicinal Products Annex 15 = Qualification and Validation Annex 18 = GMP for APIs Annex 19 = Reference and Retention Samples
(how to)
Where is it Written?
Stability (Q1A, Q1B, Q1C, Q1D, Q1E, Q1F) Test Method Validation (Q2A, Q2B) Product and Process Impurities (Q3A, Q3B, Q3C) Pharmacopoeal Harmonizations (Q4 series) Test Procedures and Acceptance Criteria (Q6A, Q6B) GMP for Active Pharmaceutical Ingredients (Q7) Pharmaceutical Development (Q8, Q8 Annex) Quality Risk Management (Q9) Pharmaceutical Quality Systems (10)
Where is it Written?
Q5B = Quality of Biotechnological Products: Analysis of Expression Q5C = Quality of Biotechnological Products: Stability Testing of
Biotechnological/Biological Products
ICH M4Q(R1): Content and Format of the Common Technical Document (CTD)
Module 1 = Administrative Information Module 2 = CTD Summaries Module 3 = Quality (Chemistry, Manufacturing and Controls) Module 4 = Nonclinical Studies Module 5 = Clinical Studies
Module 3 outlines details of the specific information Needed on the CMC Elements for Drug Substance (API) and Drug Product
1. General Information
1.1 Nomenclature 1.2 Structure 1.3 General Properties
2. Manufacture
2.1 2.2 2.3 2.4 2.5 2.6
3. Characterization 4. Control
Manufacturer Manufacturing Process and Controls Control of Materials Control of Critical Steps and Intermediates Process Validation Process Development
3.1 Structure and Characteristics 3.2 Product and Process Impurities 4.1 4.2 4.3 4.4 4.5 Specifications Analytical Procedures Validation of Analytical Procedures Batch Analyses Justification of Specification
5. Reference Standards
3. Manufacture
3.1 3.2 3.3 3.4 3.5
Components Drug Product Manufacturing Process Development Container Closure System Microbiological Attributes Compatibility Manufacturer Batch Formula Description of Process and Process Controls Control of Critical Steps and Intermediates Process Validation
4.1 Specifications 4.2 Analytical Procedures 4.3 Validation of Analytical Procedures 4.4 Batch Analyses 4.5 Justification of Specification
3.2.A Appendices A.1 Facilities and Equipment A.2 Adventitious Agents Safety Evaluation A.3 Excipients 3.2.R Regional Information - Executed Batch Records (USA only) - Method Validation Packages (USA only) - Comparability Protocols (USA only) - Process Validation Scheme for Drug Product (EU only) - Medical Device (EU only)
Biological Products
Virus Therapeutic serum Toxin Antitoxin Vaccine Blood, blood component or derivative Allergenic product Trivalent organic arsenic compound Analogous product
Examples
Vaccine biologic Tissue-derived protein drug Plasma fractionation product - biologic Therapeutic protein
Biologic Drug if predicate is tissue-derived
Peptide drug
Monoclonal antibodies
Legal Basis
Federal Food, Drug and Cosmetic Act
Drugs include biological products
Legal Basis
Public Health Service Act, Section 351
21CFR 312 Investigational drugs 21CFR 600 Biological products 21CFR 211 cGMP Submission format BLA
Biological products only License facility to manufacture product Permits suspension / revocation of licenses Review of the manufacturing facility is integral to review of the product Description of the facility, equipment, utilities and controls must be provided
Legal Basis
Device
Federal Food, Drug and Cosmetic Act 21CFR 812 Investigational Devices 21CFR 814 Devices 21CFR 820 Device Quality Systems Submission format PMA
Drug
Innovator company files a 505(b)(1) application as a NDA under 21CFR 314 Generic company files a 505(j) application as an ANDA under both 21CFR 314 and 21CFR 320 A paper NDA pathway is available under 505(b)(2), relying on data from clinical studies not performed by the applicant and for which no right of reference was given
Biologics
FD&C Act mechanisms are not available for biological products as these mechanisms require sameness PHS Act does not provide a mechanism for approving a follow-on biologic product However, historically, FDA has approved several follow-on biological products on a case by case basis
Similarity rather than sameness Clinical data were included Comparability data in some cases A finding of safety and effectiveness is not the same as a finding of substitutability
Woodcock, J. et al. The FDAs assessment of follow-on protein products: a historical perspective. Nature Reviews Drug Discovery. 6, 437 442 (2007).
Factors
Consistency of manufacturing process Conformance to existing regulations Consistency with reference standards or comparators, including comparative PK and PD data Ability to rely on existing clinical data for approved product
Examples
Human Serum Albumin Glucagon Epoetin alfa Human Growth Hormone (Omnitrope)
Impasse
Pathway charted by Omnitrope is very extensive but Omnitrope is a drug and not subject to the provisions of Section 351 of the PHS Act Biologics Price Competition and Innovation Act of 2007 (BPCIA)
Provisions of BPCIA
Compromise position Amends Section 351 of the PHS Act Provides a regulatory pathway for safe and interchangeable follow-on biological products Tacit acknowledgment that it may not be possible to dissociate the product from the process
Approval Process
Applicant must demonstrate no clinically meaningful differences in safety, purity and potency between products
Analytical data Animal testing One or more clinical studies, unless FDA
For a demonstration of safety and effectiveness, the amount and type will be influenced by the extent to which the follow-on product can be shown to be sufficiently similar to the comparator to rely on the safety and effectiveness of the comparator Influenced by clinical use of product, and the amount and type of clinical experience from the comparator and related products
Follow-on protein products. Statement of Janet Woodcock, MD, Deputy Commissioner, Chief Medical Officer, FDA before the Committee on oversight and government reform US House of Representatives, 26 March 2007. FDA web site [on line]. http://www.fda.gov/ola/2007/proteins32607.html (2007).
Interchangeable
For a designation of interchangeable, applicant must provide evidence that, in any given patient, the follow-on product yields the same clinical result as the comparator and that it presents no risk to safety or efficacy if the patient alternates or is switched between products
FDA Guidance
FDA may, but is not required to, issue guidance documents with respect to standards and criteria that will be applied to follow-on products Applications may be submitted prior to issuance of any guidance documents
Mammalian Systems
Closest to 'original' product Older systems have lower productivity Newer systems with higher productivity often require medium additives Strategies to reduce additive levels in production fermenters can lead to substrate stability issues Need to demonstrate removal of additives through downstream purification
Mammalian Systems
Adventitious agents
Raw materials Cell substrate Design downstream purification to partition
impurities?
Microbial Systems
No glycosylation Good for 'simpler' molecules
Fewer adventitious agent issues Potential for greater primary sequence heterogeneity Less complex overall product profiles
To rely on pre-clinical and clinical data, must demonstrate that comparable product has been used throughout the development program
Guiding Principles
The earlier in the manufacturing process the change is made, the greater the potential for impact of the change, and the greater the body of data required to demonstrate comparability For each step in manufacturing that is changed, all claims made for that step (eg removal of a specific impurity) must be confirmed
Translation
The contribution of each step of the manufacturing process to the quality of the product should be determined Conditions that promote product integrity should be optimized Conditions that promote product compromise should be minimized
Aspects of Manufacturing
Raw Materials
Chemical
Reagents Excipients
Biological
Starting materials Reagents Excipients
Cell Substrate
Freedom from adventitious agents
Virus Bacteria / Fungi Mycoplasma
Retrovirus Transforming virus if used Amount of genome remaining Amount of infectious virus produced
ICH Q5A: Guidance on Viral Safety Evaluation of Biotechnological Products Derived from Cell Lines of Human or Animal Origin ICH Q5D: Guidance on Quality of Biotechnological / Biological Products: Derivation and Characterization of Cell Substrates Used for the Production of Biotechnological / Biological Products
Cell Substrate
Capable of consistent and stable production under defined conditions Stability on storage Adequacy of banking system
Protein Genome
WCB not required, but encouraged Can manufacture early clinical material from
ICH Q5B: Quality of Biotechnological Products: Analysis of the Expression Construct in Cells Used for the Production of r-DNA derived Protein Products ICH Q5D: Guidance of Quality of Biotechnological / Biological Products: Derivation and Characterization of Cell Substrates Used for the Production of Biotechnological / Biological Products
Synthetic
Biological / biotechnological
Free of solvents and impurities Free of infectious agents Level of impurities understood
The further down the manufacturing process the step in which the raw material is added, the cleaner the material must be, as there is often little to no capability to clean up the product in the remaining process steps.
Purification Outcomes
Enrich for desired product Clear adventitious contaminants Remove process-related impurities Remove product-related impurities Ensure that product meets specification
ICH Q5A: Guidance on Viral Safety Evaluation of Biotechnological Products Derived from Cell Lines of Human or Animal Origin ICH Q6B: Specifications: Test Procedures and Acceptance Criteria for Biotechnological / Biological Products
Platform technologies
Modular approaches to viral clearance have been accepted for early phase clinical development Justification for applicability must be supplied Lack of consensus whether sufficient to support market applications
Process-related Impurities
Residual from cell culture Residual from cell substrate Residual from purification
DNA Host cell proteins Selective agent Medium additive
Affinity ligand Specialty reagent Contaminants from reagents added late in the
purification process
Product-related impurities
Product aggregates Product degradants Modified product
Deamidated Oxidated Misfolded Unconjugated Truncated Glycosylation variants
Process Understanding
Define equipment Impact of scale Factorial studies Robustness studies Mixing studies Hold time studies
Process intermediates Process buffers Resin lifetime
Equipment
Amount of product required Ease of scale change with equipment included in the initial plan Some technologies do not scale well, either up for production or down for modeling studies Fermentation is an example
Impeller configuration Gas exchange Nutrient availability
Scale
Want to minimize need to perform process validation at full scale Most process critical studies are performed at small scale Relevance to production scale is absolutely dependent on the accuracy of reproduction of the process when run at full scale
Define process parameters Explore parameter interactions Execute challenge studies for clearance Explore improvements Explore anomalies Refine process parameters
Factorial Studies
Two-factor combinations of parameters
Interactions Criticality
In some cases, may need to assess the interactions of three parameters The more complex the product, the more convoluted the studies
Robustness
Push the limits of the process parameters identified through the factorial studies
Edge of failure Proven acceptable range Operating range
Bioburden
interactions Clinical manufacturing data show that the process runs within specified parameters in a reproducible manner Conformance demonstrated through successive, successful runs protocol contains pre-specified criteria for dropping a run No parameters are listed as for information only all information gathering should have been completed in the factorial and robustness studies Supportive validation studies Submitted in the market application
The manufacturer should define the pattern of heterogeneity of the desired product and demonstrate consistency with that of the lots used in preclinical and clinical studies.
When process changes and degradation products result in heterogeneity patterns that differ from those observed in the material used during preclinical and clinical development, development, the significance of these alterations should be evaluated.
IMMUNOGENICITY
ICH Q6B (August 1999) Specifications: Test Procedures and Acceptance Criteria for Biotechnological/Biological Products
Product-related substances: Molecular variants of the desired product formed during manufacture and/or storage which are active and have no deleterious effects on the safety and efficacy of the drug product. These variants possess properties comparable to the desired product and are not considered impurities. Product-related impurities: Aggregates, truncated forms, other modified forms (deamidated, isomerized, oxidized, etc). Degradation products are considered product-related impurities.
Process-related impurities: Host cell proteins, host cell nucleic acids, cell culture derived components (e.g. serum, antibiotics), downstream process additives (e.g. enzymes, reducing agents, ligands). Process impurities are often treated as product
residuals.
Physiochemical and Biological Methods Frequently used with Well-Characterized Protein Products
METHOD pH (if liquid) Karl Fisher (if lyophilized) Appearance UV Absorbance SDS-PAGE (R/NR) SEC-HPLC RP-HPLC, IEX-HPLC, HIC-HPLC Peptide Mapping Mass Spectrometry Isoelectric Focusing Capillary Electrophoresis Immunoassay/ELISA Ligand Binding Assay In Vitro Bioassay N terminal Sequencing Amino Acid Analysis Product Residuals Process Residuals Monosaccharides Oligosaccharide Sialic Acid Circular Dichroism, FTIR AUC ATTRIBUTE General quality Moisture, integrity General quality Concentration Identity, purity, integrity Identity, purity, integrity Identity, purity, integrity Identity, integrity Identity, integrity Identity, integrity Identity, integrity Identity, integrity Identity, potency, integrity Identity, potency, integrity Identity Identity, concentration Purity Purity Identity Identity Identity Conformation Impurities (Aggregates) TYPICAL USE C, C, C, C, C, C, C, C, C, C, C, C, C, C, C, C, C, C, C, C, C, C C R, R, R, R, R, R, R, R, R, R, R, R, R, R, R R R R R* R* R* S S S S S S S S S S S S S S
Test methods for drug substance characterization (supplementary tests that should be performed in addition to lot-release testing)
ADCC, CDC, neutralization, etc. ------ Potency characterization Isotyping ------Verify IgG isotype Peptide mapping with electrospray ionization mass spectrometry (ESI-MS) -------
Truncation, deamidation, oxidation, phosphorylation, substitution, alterations in oligosaccharides, detection incorrect sequence Focused peptide map ---Detect specific product-related impurity/substance (e.g., oxidation) Carbohydrate composition ----- Determine monosaccharide and sialic acid content Oligosaccharide profile -------- Determine oligosaccharides present N-terminal and C-terminal -----Determine proportion of C-terminal lysine forms and content N-terminal truncation and/or blockage Western blotting --------- Heavy and/or light chain related species Analytical ultracentrifugation ------ Detect and characterize aggregates
Matrix-assisted laser-desorption ionization time-of-flight (MALDITOF) mass spectrometry -------- Aggregates, breakdown products, verify mass ESI-MS (intact molecule) ----- Aggregates, breakdown products, verify mass,
Analysis and Structure Characterization of Monoclonal Antibodies BioProcess International (Feb 2004) Schenerman, Sunday, Kozlowski,Webber,
Physiochemical and Biological Methods Being used with Gene Therapy Viral Vectors
METHOD pH Appearance UV Absorbance Colormetric Protein Assay In Vitro Transgene Expression Process Residuals SDS-PAGE (R/NR) Immunoblot/immunoassay IEX-HPLC (particles) RP-HPLC (protein map) Light Scattering Electron Microscopy
ATTRIBUTE General quality General quality Particle count Protein concentration Genetic Stability, Potency Purity Identity Identity Identity, integrity Identity, integrity Integrity
USE C, C, C, C, C, C, C C C C C C R, R, R, R, R, R S S S S S
Determine particle number and aggregation state Determine particle number and aggregation state Determine particle number
Size exclusion chromatography multi-angle light scattering (SEC-MALS) TCID, FFA, plaque, or other assays Polymerase chain reaction (PCR) Density gradient centrifugation
Determine proportion of defective particles based on the difference between total particles and infectious particles Determine proportion of nucleic acid containing particles Determine proportion of defective particles based on relative densities of particle populations
Determine proportion of defective and aggregated particles based on hydrodynamic properties of particle populations
Lot Release and Characterization Testing of Live-VirusBased Vaccines and Gene Therapy Products, Gombold, Peden, Gavin, Wei, Baradaran, Mire-Sluis, and
Determine proportion of defective and aggregated particles based on particle mass and charge Determine proportion of defective and aggregated particles based on hydrophobic interaction properties Determine proportion of defective and aggregated particles based on charge state of the particles Determine proportion of defective and aggregated particles based on hydrodynamic sieving properties of particle populations
Ion-exchange chromatography (IEC) Size exclusion chromatography (SEC) SDS-PAGE (or equivalent) Western blot
Determine composition of proteins contained in preparation based on polypeptide chain sizes Determine composition of immunoreactive proteins contained in preparation Quantify process-related impurities
Lot Release and Characterization Testing of Live-VirusBased Vaccines and Gene Therapy Products, Gombold, Peden, Gavin, Wei, Baradaran, Mire-Sluis, and
ICH Q5E: Comparability of Biotechnological/Biological Products Subject to Changes in Their Manufacturing Processes (2003)
During product development, it is expected that multiple changes in the manufacturing process will occur that could impact drug product quality, safety, and efficacy. Comparability exercises are generally performed to bridge nonclinical and clinical data generated with pre-change to postchange product in order to facilitate further development and, ultimately, to support the marketing authorisation.
ICH Q5E: Comparability of Biotechnological/Biological Products Subject to Changes in Their Manufacturing Processes (2003)
Any change with the potential to alter protein structure or purity and impurity profiles should be evaluated for its impact on stability, since proteins are frequently sensitive to changes, such as those to buffer composition, processing and holding conditions, and use of organic solvents. Furthermore, stability studies might be able to detect subtle differences that are not readily detectable by the characterisation studies. Accelerated and stress stability studies are often useful tools to establish degradation profiles and provide a further direct comparison of pre-change and post-change products.
Pre-clinical and clinical lots are irreplaceable material once they are gone, they are gone Conditions of storage may not maintain perfect stability of the retains, but it is better to have slightly degraded retains than no retains at all Degradants can be distinguished from heterogeneous impurities via side-by-side stress degradation studies (a key aspect of comparability studies) Retains are also invaluable for demonstrating the suitability of new analytical methods as compared to older methods they can prove or disprove the need to modify product specifications when analytical methods become more sensitive or more specific for product impurities.
Comparability Studies Utilize Analytical Tests To Answer the Question: Is Batch A Comparable to Batch B? Testing Scheme Outline: Drug Substance Samples
Physiochemical Characteristics ProductProduct-Related Impurities Functional Characteristics ProcessProcess-Related Impurities
Any Differences Might Require In Vivo Studies To Assess Impact Of Changes On PK/PD And Safety
Product Degradants
Preclin safety
Clinical safety
Clinical Efficacy
COMPARABILITY STUDIES
Preclin safety
Clinical safety
Clinical Efficacy
COMPARABILITY STUDIES
Ref Drug
Ref Drug
Ref Drug
FOB
Some species below LOD of massmass-based protein methods FOB: Impossible to do Direct Comparison at level of API
Defining Your Product Profile and Maintaining Control Over It, Part 2: Monitoring Host Cell Proteins (Champion, Madden, Dougherty, Defining Your Product Profile and Maintaining Control Over It, Part 3: Product-Related Impurities (Boerner and Clouse) BioProcess Defining Your Product Profile and Maintaining Control Over It, Part 4: Process-Related Impurities - Aggregates (Brorson and Phillips)
Compendial Methods
General Chapters = overview of issues relevant to the production and testing of pharmaceutical products Methods = general procedures for chemical, physical, biological, microbiological, immunological methods Monographs = product-specific specifications for release, label claims, and storage conditions Many old biological products (vaccines, plasma products, natural products (e.g. porcine insulin) and herbals have monographs Few new biotechnology products (WCBP, conjugate vaccines) have monographs (yet) .
Non-Compendial Method
A procedure that is used to test products that are not listed in Compendial monographs. Most new products will not be listed in the Compendia and will therefore require nonnon-compendial analytical procedures for many attributes such as identity, purity/impurities, potency and stability. NonNon-compendial methods require validation per ICH Q2(R1).
Stability-Indicating Method
A procedure that is used to assess the presence/absence of degradants in a product. It is capable of accurately measuring changes in the product that can occur under conditions of physical physical or chemical stress. Methods shown to be stabilitystability-indicating are used in stability protocols to assess the quality of product batches over time under under specified conditions of storage, and to establish the rere-test or expiration dating of products. Methods used in stability protocols must be validated to be stabilitystability-indicating. indicating.
comparability (not for routine cGMP release or stability testing) fully validated (e.g. for long-term robustness)
QC test methods used during product development that are not yet
Method Qualification vs Validation What is the Difference? CMC Strategy Forum July 2003 Ritter, Simmerman, Advant, McEntire,
optimized until it can achieve acceptable performance, or it should be rejected for the application.
Method Qualification vs Validation What is the Difference? CMC Strategy Forum July 2003 Ritter, Simmerman, Advant, McEntire,
9 These specifications must be met by every validation trial 9 A method can fail validation; if it does, assignable cause for
the failure should be investigated and resolved before the method can be considered fully validated.
Method Qualification vs Validation What is the Difference? CMC Strategy Forum July 2003 Ritter, Simmerman, Advant, McEntire,
ICH Q2 (R1)
Establishing through documented evidence a high degree of assurance that an analytical method will consistently yield results that accurately reflect the quality characteristics of the material tested.
Could any analyst run this assay on any day, and get the same results?
Would you want to set pass or fail specifications on these two peaks forever? What factors could impact the reliable performance of this method for this product?
* NMR The two parameters most often inadequately assessed for the methods ACTUAL intended use.
Various [method] modifications modificationshave been used for product stability testing. These modifications have not been validated or approved by the FDA. FDA.
FDA Guidance for Industry: Investigating Out of Specification Test Results for Pharmaceutical Production, CDER, September 2006
Complex molecules, often biologically derived Demonstrated to be a key assay component Sensitive to operational or assay conditions Selected characteristics may vary from lot to lot Limited concurrent availability of multiple lots Single-source product manufacturer
Ritter, N and Wiebe, M (2001) Validating Critical Reagents Used in cGMP Analytical Testing, BioPharm 14:5, pp 12-20.
Management should ascertain the significance that OOS results represent in the overall quality assurance program. Management should be especially alert to developing trends.
FDA Guidance for Industry: Investigating Out of Specification Test Results for Pharmaceutical Production, CDER, September 2006
We recommend that you design the comparability protocol to demonstrate that the proposed changes in the analytical procedures improve or do not significantly change analytical procedure characteristics that are relevant to the type of analytical procedure, its validation, and intended use (e.g., accuracy, precision, specificity, detection limit, quantitation limit, linearity, range).
When you use the new revised analytical procedure for release or process control, you should not delete a test or relax acceptance criteria that we approved in your application, unless and until FDA informs you that the approved acceptance criteria are no longer required.
Transfer of qualified vs validated methods: How much do you know about robustness parameters?
Caution to R&D:
Do not transfer methods that require subjective adjustments Do not validate methods that are not optimized for robustness
Caution to QC:
Do not accept methods that are not adequately validated Do not tweak validated methods follow change control