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REFERENCES
[1] Nam T. S. Phan, Hoa T. V. Tran Organic chemistry, VNU-HCMC Publisher, 2011 [2] Nam T. S. Phan, Study guide to organic chemistry, VNU-HCMC Publisher, 2011 [3] Paula Y. Bruice, Organic chemistry, fifth edition, Pearson Prentice Hall, 2007 [4] Francis A. Carey, Organic chemistry, fifth edition, McGraw-Hill, 2003 [5] Paula Y. Bruice, Study guide and solutions manual Organic chemistry, fifth edition, Pearson Prentice Hall, 2007 [6] Graham T.W. Solomons, Craig B. Fryhle, Organic chemistry, eighth edition, John Wiley & Sons, 2004
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COURSE OUTLINE
Isomerism Electronic & steric effects Introduction to reaction mechanisms Alkanes Alkenes Alkadienes Alkynes Aromatic hydrocarbons Alkyl halides Alcohols & phenols Aldehydes & ketones Carboxylic acids Amines & diazoniums
Chapter 1:
ISOMERISM
Isomers: Compounds with the same molecular formula but different structural formulas Isomers
Constitutional isomers
Stereoisomers
Conformational isomers
Configurational isomers
Geometric isomers
CONSTITUTIONAL ISOMERS
Different compounds that have the same molecular formula but differ in their connectivity
STEREOISOMERS
Isomers that differ in the way their atoms are arranged in space
Conformational isomers Configurational isomers
CONFORMATIONAL ISOMERS
Different shapes of the same molecule resulting from rotation around a single C-C bond Conformational isomers are not different compounds
Conformations of butane
10
Conformations of cyclohexane
11
12
13
14
GEOMETRIC ISOMERS
15
16
17
Rule 2
18
Rule 3
Rule 4
19
OPTICAL ISOMERS
A chiral opbject
An achiral object
20
OPTICAL ISOMERS
Optical isomers are configurational isomers which are able to rotate plane-polarized light clockwise or anticlockwise plane-polarized light
21
Optically inactive
Optically active
22
Asymmetric carbon
An asymmetric carbon is a carbon atom that is bonded to 4 different groups
23
Drawing enantiomers
Using perspective formulas:
Convention
2 bonds in the paper plane 1 bond as a solid wedge 1 bond as a hatched wedge
25
Drawing enantiomers
Using Fisher Projection formulas:
Convention
Carbon chain is drawn along the vertical line Vertical lines: bonds going into the page Horizontal lines: bonds coming 26 out of the page
NAMING ENANTIOMERS
ABSOLUTE CONFIGURATION: R-S SYSTEM
Using Cahn-Ingold-Prelog rules View the molecule with the lowest priority group pointing away If the direction from highest priority group to the next is clockwise: R If the direction is anticlockwise:S
27
28
Using Cahn-Ingold-Prelog rules When the lowest priority group is on a vertical bond: + If the direction from highest priority group to the next is clockwise: R + If the direction is anticlockwise:S When the lowest priority group is on a horizontal bond: + opposite answers
29
30
NAMING ENANTIOMERS
RELATIVE CONFIGURATION: D-L SYSTEM
Glyceraldehyde: the standard compound for chemical correlation of configuration
31
32
33
34
35
Meso compounds
36
Enantiomers vs diastereoisomers
Enantiomers: Nonsuperimposable mirror images Diastereoisomers: not mirror images of each other
37
Enantiomers vs diastereoisomers
Enantiomers normally have identical physical & chemical properties Enantiomers normally interact differently with other chiral molecules Diastereoisomers can have different physical & chemical properties Enantiomers are always chiral Diastereoisomers can be chiral or achiral (meso compounds)
38
Separating enantiomers
40
41
Chapter 2:
Steric
Electronic
Inductive
Hyperconjugation
Conjugation / Mesomeric
2
-I
Through a group in a periodic table
-I
6
Strong -I weak -I
7
O is more electronegative than C Electrons move through -bond network towards C=O The conjugated system is polarized C=O has negative conjugation / mesomeric effect (-C / -M) on the conjugated system
C CH
-C
CH
+C
CH
CHR
C
-C
O R
+C
CH
CH
CH
-C
CH
O R
+C
10
OH
+C
-C
-C
+C
N
NH2
+C -C
-C
+C
11
CHO, C(O)R, COOH, COOR, NO2, CN, aromatics, alkenes +C groups generally contain a lone pair of electrons or a -bond (s):
Cl, Br, OH, OR, SH, SR, NH2, NHR, NR2, aromatics, alkenes Aromatics or alkenes can be both +C and-C
12
+C
Through a group in a periodic table
+C
13
CH
CH
CH
CH
H CH
CH
Electron density from C-H flows into the vacant p orbital (in carbocation / C=C / CC) because orbitals can partially overlap
16
H effect of -CH3 is stronger than H effect of -CH2H effect is generally stronger than I effect
CH Cl
CH2
CH2
CH3
STERIC EFFECTS
A steric effect is an effect on relative rates caused by space-filling properties of those parts of a molecule attached at / near the reacting site Steric hindrance: the spatial arrangement of the atoms / groups at / near the reacting site hinders / retards a reaction Generally, very large & bulky groups can hinder the formation of the required transition state
18
Steric hindrance
19
Steric hindrance
20
21
22
Electrondonating groups
Electronwithdrawing groups
23
Electrondonating groups
Electronwithdrawing groups
24
If C groups are introduced at ortho- & para position on phenol rings: + The anion (-O-) can be further stabilized by delocalization through the conjugated system as the negative charge can be spread onto the -C groups + The O-H bond is more polarized as electron density on OH can be spread onto the -C groups
If I groups are introduced on phenol rings, the effect will depend on the distance: + The closer the I group is to the negative charge (-O-), the greater the stabilizing effect is + The closer the I group is to the OH, the O-H bond is more polarized
OH NO2 >
OH
10.28
27
OH OCH3 >
OH
pKa =
8.48
9.02
9.38
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Benzoic acid derivatives pKa CH3C6H4COOH NH2C6H4COOH FC6H4COOH ClC6H4COOH BrC6H4COOH IC6H4COOH HOC6H4COOH CH3OC6H4COOH NCC6H4COOH NO2C6H4COOH
Position on benzene ring Ortho3.91 4.97 3.27 2.92 2.85 2.86 2.97 4.09 3.14 2.16 Meta4.27 4.78 3.87 3.82 3.81 3.85 4.06 4.09 3.84 3.47 Para4.36 4.92 4.14 3.98 3.97 4.02 4.48 4.47 3.55 3.41
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CH3CH2CH CHCOOH < CH2 CHCH2CH2COOH < CH3CH CHCH2COOH pKa = 4.83 pKa = 4.68 pKa = 4.48
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pKa of ammonium cation omp4.39 4.69 5.12 CH3O 4.49 4.20 5.29 C2H5O 4.47 4.17 5.25 C6H5 3.78 4.18 4.27 F 3.20 3.59 4.65 Cl 2.61 3.34 3.98 Br 2.60 3.51 3.91 I 2.60 3,61 3,78 CH3OCO 2,23 3.64 2.38 CF3 --3.50 2.60 CN --2.76 1.74 -0.29 2,50 1,02 NO2
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STABILITY OF CARBOCATIONS
+H & +I
34
+C
+C
Allylic & benzylic carbocations are generally stable due to the electron delocalization (+C effects)
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Not all allylic & benzylic carbocations have the same stability
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STABILITY OF RADICALS
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STABILITY OF CARBANIONS
40
Chapter 3:
Reaction mechanism: the description of the step-by-step process by which reactants are changed / converted into products
ELIMINATION REACTIONS
In an elimination reaction: + Groups / atoms are eliminated from a reactant + A double bond is formed between the 2 carbons from which atoms are eliminated
8
Strong base
10
11
Weak base
12
14
Not a carbocation, but a cyclic halonium ion More stable than carbocation
15
The addition of nucleophiles to the carbon atom of the carbonyl group in nucleophilic addition reactions 16
Reaction mechanism
Positive center A nucleophile
Rate-determining step
slow
fast
17
Examples:
Nucleophiles
18
Although benzene has 3 double bonds, the overall reaction is electrophilic substitution rather than electrophilic addition 19
Reaction mechanism
Rate-determining step
An electrophile
20
Examples:
An electrophile
Rate-determining step
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Chapter 4:
ALKANES
NOMENCLATURE OF ALKANES
ALKYL SUBSTITUENTS
Substituents are listed in alphabetical order Carbon chain is numbered with the lowest possible number in the compound
Di, tri, tetra, n, sec, and tert are ignored in alphabetizing substituents Iso, neo, and cyclo are not ignored
C5-11
C9-16 C15-25
PREPARATION OF ALKANES
10
Reduction reactions
11
Wurtz reactions
symmetric alkane
Limitations: + The Wurtz reaction is limited to the synthesis of symmetric alkanes from alkyl iodides & bromides + If two dissimilar alkyl halides are taken as reactants, then the product is a mixture of alkanes that is, often, difficult to separate + A side reaction also occurs to produce an alkene + The side reaction becomes more significant when the alkyl 12 halides are bulky at the halogen-attached carbon
Corey-House synthesis the reaction of a lithium dialkyl cuprate with an alkyl halide to form a new alkane
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REACTIVITY OF ALKANES
Alkanes have only strong bonds Electronegativity of C & H are approximately the same None of the atoms in alkanes have any significant charge Neither nucleophiles nor electrophiles are attracted Alkanes are very unreactive
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HALOGENATION OF ALKANES
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16
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PRODUCT DISTRIBUTION
It must be easier to abstract a hydrogen atom from a secondary carbon than from a primary carbon
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Reactivity - relative rate at which a particular hydrogen is abstracted in chlorination reactions: At room temperature
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20
Br2 is less reactive towards alkane than Cl2, but Br2 is more selective
Bromination at 125 oC
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Too violent
Too slow
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Racemic mixture
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COMBUSTION OF ALKANES
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Chapter 5:
An sp2 hybridized carbon
ALKENES
NOMENCLATURE OF ALKENES
The IUPAC name of an alkene is obtained by replacing the ane ending of the corresponding alkane with ene
Ethylene is an acceptable synonym for ethene in the IUPAC system Propylene, isobutylene and other common names ending in ylene are NOT acceptable IUPAC names
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Determine the parent hydrocarbon the longest continuous carbon chain containing the C=C
PREPARATION OF ALKENES
Dehydrations of alcohols
Acid
isomerization
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isomerization
Alkyne hydrogenations
Pd/CaCO3 + Pb(OAc)2 / quinoline
REACTIONS OF ALKENES
Additions of hydrogen halides (AE)
More stable
Markovnikovs rule
10
Carbocation rearrangement
More stable
11
More stable
12
Stereochemistry
Racemic mixture
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15
16
Reaction mechanism:
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Additions of halogens
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19
Stereochemistry
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21
Stereochemistry
2 asymmetric carbons are created
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Markovnikovs rule
H2SO4, H3PO4
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Reaction mechanism:
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Alcohols by oxymercuration-reduction
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Regioselectivity:
Anti-Markovnikov
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Reaction mechanism:
Syn addition
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Stereochemistry
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Stereochemistry
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Reactions of epoxides
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Stereochemistry
Anti additions
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Reaction mechanism:
Syn additions
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Ozonolysis of alkenes
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In the presence of an oxidizing agent, the products will be ketones / carboxylic acids
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Polymerizations
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Chapter 6:
CONJUGATED ALKADIENES
A non-polar molecule
NOMENCLATURE OF ALKADIENES
PREPARATION OF 1,3-ALKADIENE
Dehydrogenations
Reaction mechanism:
10
11
12
DIELS-ALDER REACTIONS
13
14
Stereochemistry
Racemic mixture
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16
17
Polymerizations
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Chapter 7:
An sp hybridized carbon
ALKYNES
NOMENCLATURE OF ALKYNES
The IUPAC name of an alkyne is obtained by replacing the ane ending of the corresponding alkane with yne
In common nomenclature, alkynes are named as substituted acetylenes Both ethyne & acetylene are acceptable names for C2H2
3
Lowest possible number, regardless of which functional group gets the lower number
The same low number for both directions, lower number 4 for C=C
PREPARATION OF ALKYNES
Sources of acetylene
REACTIONS OF ALKYNES
Acidic hydrogen
10
Markovnikovs rule
Terminal alkynes are less reactive than internal alkynes, need Hg2+ as a catalyst
11
12
Regioselectivity
Markovnikovs rule
Anti-Markovnikov
13
Product is alkene
14
Ozonolysis of alkynes
Ozonolysis used to be employed in structure determination, but has been superseded by spectroscopic methods
15
Polymerizations
16
Chapter 8:
ARENES
Benzene
6e=4x1+2
3
Aromatic:
(+)
(-)
(+)
N H
S
4
NOT aromatic:
NOT (4n + 2) e
(.)
(-)
(+)
4e
(.)
5e
7e
8e
Alphabetical order
10
PREPARATION OF BENZENE
Petroleum
Bezene
11
REACTIONS OF BENZENE
Halogenations of benzene
12
Catalyst regeneration 13
Nitration of benzene
14
Sulfonation of benzene
Reversible reaction
15
16
17
18
Carbocation rearrangement
19
20
21
22
Rearrangement
23
Electrondonating
Electronwithdrawing
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+I, +C, +H
Relative reactivity
- I, -C,
Electron-donating
Eelectron-withdrawing
Activating
Deactivating
ortho/para-directing
meta-direcring
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26
27
28
E/W group
29
E/D group
30
E/W group
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ADDITIONAL CONSIDERATIONS
More deactivating than halogen, the ring is too unreactive for (only) Friedel-Crafts alkylations & acylations
33
Aniline & N-substituted anilines do NOT undergo FriedelCrafts reactions: More deactivating than halogen
Also can NOT undergo nitration primary amines are easily oxidized Phenol & anisole do undergo Friedel-Crafts reactions, orienting ortho & para oxygen does NOT complex with the Lewis acid 34
35
37
The greater the number of E/W substituents, the easier it is to carry out the reaction
39
40
Chapter 9:
ALKYL HALIDES
More stable
Very unreactive
SN1 vs SN2 depending on alkyl structure, nucleophile concentration & reactivity, and solvent
9
The nucleophile attacks from the back side / the side directly opposite the leaving group This attacks causes an inversion of configuration
10
11
12
13
Steric hindrance
15
16
17
18
20
Nucleophiles that have the same attacking atom: nucleophilicity roughly parallels basicity:
21
ROH, HOH
22
23
24
25
26
SN1 vs SN2
27
28
29
30
Nucleophilic substitutions
Eliminations
31
ELIMINATION REACTIONS
In an elimination reaction: + Groups / atoms are eliminated from a reactant + A double bond is formed between the 2 carbons from which atoms are eliminated
32
Stereochemistry of E2 reactions
Anti-elimination is highly favored in an E2 reaction 2 groups / atoms are removed from opposite sides of C-C bond
33
Regioselectivity of E2 reactions
34
Keep in mind that the major product of an E2 reaction is always the more stable alkene (not always the more substituted alkene)
35
In some E2 reactions, the less stable alkene is the major product due to steric effects Zaitsevs product
Hofmanns product
36
37
38
39
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Stereochemistry of E1 reactions
The carbocation formed in the 1st step is planar, so both syn & anti-elimination can occur
GRIGNARD REAGENTS
Strong base
Strong nucleophile
42
Strong base
Grignard reagents readily react with acidic groups: -OH, -NH2, -NHR, -SH, -CCH, -COOH43
44
45
46
Numbers 1 & 2 are used to indicate that the acid is not added until the reaction with the Grignard reagent is complete
47
48
Can be chiral
49
50
51
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Chapter 10:
ALCOHOLS-PHENOLS
NOMENCLATURE OF ALCOHOLS
Common names: alkyl + alcohol
PREPARATION OF ALCOHOLS
Alcohols from alkenes
Markovnikovs rule
H2SO4, H3PO4
6
Anti-Markovnikov
Aldehydes & ketones can also be reduced using LiAlH4, H2/Pt, Pd, Ni, Ru 9
10
11
REACTIONS OF ALCOHOLS
Reactions of proton in -OH
12
Dehydration reactions
13
isomerization
14
Primary alcohol
Internal alkene 1-alkenes can NOT be prepared using the dehydration reaction
15
16
isomerization
17
19
Reaction mechanism:
20
21
Reaction mechanism:
Reversible reaction
22
Oxidation reactions
23
PHENOLS
SP2 Carbon SP3 Carbon
NOMENCLATURE OF PHENOLS
26
PREPARATION OF PHENOLS
27
REACTIONS OF PHENOLS
Halogenation reactions
Strong activating group Non-polar solvent
Polar solvent
NO monobromination
28
Nitration reactions
NOT necessary to use mixture of concentrated HNO3 & H2SO4
Sulfonation reactions
29
O-acylations of phenols
NO Lewis acid
31
32
33
Can NOT prepare aryl ether directly from the reaction of phenol & alcohol in the presence of acid catalyst
34
35
Reaction mechanism:
SN2
NOTE:
36
Oxidation of phenols
37
38
39
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Chapter 11:
C=O
ALDEHYDES-KETONES
C=C
SP2 carbon
2
NOMENCLATURE OF ALDEHYDES
Common names: carboxylic acid aldehyde is substituted for ic acid
NOMENCLATURE OF KETONES
Derived names: alkyls + ketone
In the presence of an oxidizing agent, the products 8 will be ketones / carboxylic acids
Anti-Markovnikov
9
10
12
13
The addition of nucleophiles to the carbon atom of the carbonyl group in nucleophilic addition reactions
15
Numbers 1 & 2 are used to indicate that the acid is not added until the reaction with the Grignard reagent is complete
17
18
19
Nitriles amines
20
21
Reaction mechanism:
22
23
Reaction mechanism:
24
25
26
Reaction mechanism:
27
28
29
NaBH4 can reduce aldehyde, ketones, acyl chlorides, but NOT alkenes & alkynes LiAlH4 is a stronger reducing agent than NaBH4, but NOT safe to use for aldehydes & ketones
30
NOTE:
31
Oxidation reactions
32
Tollens reagent
Too weak to oxidize an alcohol or any other functional groups Should be used when oxidizing aldehydes containing double bond
33
34
Aldol additions
35
37
Aldol condensations sometimes occur under the aldol addition conditions without additional heating
NOT isolated
38
4 addition products
NOT useful
39
40
Halogenations at -C
Only 1 hydrogen is replaced in acidic solution
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Chapter 12:
C=O
CARBOXYLIC ACIDS
C=C
From nitriles
From aldehydes
10
From alkylbenzenes
11
12
13
14
15
Reactions of esters
Ester hydrolysis
16
Transesterification reactions
17
18
IUPAC names: replace ic acid with yl halide / carboxylic acid with carbonyl halide
19
20
An amide
21
Amide formation
22
IUPAC names: replace ic acid, oic acid, ylic acid with amide
23
Reactions of amides
24
Reaction mechanism:
27
28
Reduction reactions
29
LiAlH4 is used to reduce only compounds such as acids, esters, amides that can NOT be reduced by milder agents
30
Chapter 13:
AMINES-DIAZONIUM SALTS
NOMENCLATURE OF AMINES
Substituents are listed in alphabetical order, regardless of whether they are attached to the nitrogen or the hydrocarbon
5
PREPARATIONS OF AMINES
Alkylation of ammonia
Amines by reduction
Preparation of arylamines
It is possible to selectively reduce just 1 of 2 nitro groups using S2 H2 /Pd, Fe/HCl will reduce both nitro groups 10
11
12
BASICITY OF AMINES
13
REACTIONS OF AMINES
14
15
16
17
19
Oxidation reactions
Amines can be oxidized by hydrogen peroxide, peroxyacids, other common oxidizing agents
20
21
Mechanism:
22
23
24
26
Schiemann reaction
27
28
Reductive deaminations
29
Electrondonating group
DESIGNING A SYNTHESIS
31
32
33
34
35
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