Soil macroaggregate turnover and microaggregate formation: a mechanism for carbon sequestration under no-tillage agriculture. Absence of tillage promotes greater longevity of newly-formed macroaggregates. Microaggregates can be used as a measurement tool for soil organic matter.
Soil macroaggregate turnover and microaggregate formation: a mechanism for carbon sequestration under no-tillage agriculture. Absence of tillage promotes greater longevity of newly-formed macroaggregates. Microaggregates can be used as a measurement tool for soil organic matter.
Soil macroaggregate turnover and microaggregate formation: a mechanism for carbon sequestration under no-tillage agriculture. Absence of tillage promotes greater longevity of newly-formed macroaggregates. Microaggregates can be used as a measurement tool for soil organic matter.
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Soil Biology & Biochemistry
j our nal h o m ep age: www. el sevi er . com/ l ocat e/ soi l bi o
Citation classics
Aggregate-associated soil organic matter as an ecosystem property and a measurement tool q
Johan Six a, * , Keith Paustian b
a Department of Environmental Systems Science, Swiss Federal Institute of Technology, ETH-Zurich, Tannenstrasse 1, 8092 Zurich, Switzerland b Department of Crop and Soil Science, Natural Resource Ecology Laboratory, Colorado State University, Fort Collins, CO 80523, USA
a r t i c l e i n f o
Article history: Received 21 June 2013 Accepted 25 June 2013 Available online 9 July 2013
Keywords: Soil organic matter Aggregates Agricultural management Modeling Carbon cycling Soil carbon stabilization a b s t r a c t
Our 2000 paper Soil macroaggregate turnover and microaggregate formation: A mechanism for C seques- tration under no-tillage agriculture had its genesis in attempts to identify and isolate soil organic matter (SOM) fractions that reect the impacts of climate, soil physiochemical properties and physical distur- bance on the soil organic carbon balance. A key prerequisite for the investigation was the development of a simple device to isolate the microaggregates (53e250 mm) contained within stable (i.e., resistant to slaking) macroaggregates (>250 mm) obtained by conventional wet-sieving. By comparing the abun- dance and C content of micro-within-macroaggregates, the size distribution of intra-aggregate partic- ulate organic matter (iPOM) and isotopically-based estimates of the age of the organic matter in the different fractions, we were able to corroborate our hypothesis that the absence of tillage (i.e., in no-till and native soils) promotes greater longevity of newly-formed macroaggregates, resulting in greater SOM stabilization in microaggregates formed within stable macroaggregates. Follow-up research has indi- cated that the microaggregate-within-macroaggregate fraction is 1) potentially a robust indicator for management-induced SOC changes over decadal time scales, 2) of biological origin and therefore useful in interpreting impacts of soil biota on soil C and N dynamics, but not in-situ CO2 and N2O uxes, 3) useful in complimentary chemical and spectroscopic approaches to relate SOM dynamics to soil structure and attributes of the soil pore space, and 4) a good candidate for being incorporated into models as a measurable fraction. 2013 Elsevier Ltd. All rights reserved.
1. Introduction
During the 1980s and 90s, two topics of debate came into the mainstream of soil organic matter SOM research, both of which continue to be widely discussed and studied to the present day. One was the issue of how to characterize SOM in terms of its compo- nents in ways that better reected ecosystem-level perturbations such as tillage, land cover change and climate change. There was a growing consensus that the fulvic and humic acids revealed by classical chemical extraction processes were not representative of functional SOM fractions (Elliott et al., 1996). This realization sparked an interest in physically-dened SOM fractions, whereby the actual location of organic matter within the soil matrix and the size and density of different organo-mineral complexes were
q Dedicated to Dr. Ted Elliott who was instrumental in developing our Citation Classic. * Corresponding author. Tel.: 41 44 63 2 84 83. E-mail address: Jsix@ethz.ch (J. Six). viewed as key attributes determining the function and turnover of SOM. The second topic arose from the recognition that soil C sequestration might be a viable option for greenhouse gas and climate change mitigation (Paustian et al., 1997). Hence, there was a greater imperative to elucidate the underlying mechanisms for soil C sequestration under conservation management practices and develop means to better measure and predict soil C stocks changes as a function of management and environmental drivers. In the US, there was particular interest in the effects of no-tillage manage- ment and land use change (e.g. from native to cropped) on SOM-C stocks (Bruce et al. 1999; Lal et al. 1999). It is within this framework that the research described in our paper (Six et al., 2000a) was developed, conducted and interpreted. We sought to elucidate how changes in aggregation were linked to soil C sequestration under no-tillage compared to conventional tillage management. This link between aggregate structure and SOM dynamics had been investigated before (Elliott, 1986), but here we developed a new method to isolate a specic fraction, i.e., the microaggregate-within-macroaggregate. Six et al. (1998, 1999) hypothesized that this aggregate fraction is a fraction in which
0038-0717/$ e see front matter 2013 Elsevier Ltd. All rights reserved. http://dx.doi.org/10.1016/j.soilbio.2013.06.014 J. Six, K. Paustian / Soil Biology & Biochemistry 68 (2014) A4eA9 A5 A5 J. Six, K. Paustian / Soil Biology & Biochemistry 68 (2014) A4eA9
soil C is preferentially stabilized in no-tillage soils. The hypothesis was tested and corroborated across four different sites, allowing us to generalize, the proposed mechanism for soil C sequestration with no-tillage management.
2. Background
The theoretical and methodological framework for our paper stems most directly from the Elliott (1986) paper on aggregate structure and organic matter in native and cultivated soils in the US Great Plains. Elliott had long been interested in the physical structure of the soil as it relates to SOM and the dynamics of the soil decomposer community, as evidenced by his seminal paper on habitable pore space and trophic interactions in soil (Elliott et al., 1980). Later, while working on the National Science Foundation Great Plains Project (one of the rst regional-scale agroecosystem studies), Elliott was inspired by the conceptual model of soil aggregate hierarchy presented by Tisdall and Oades (1982) and its potential applicability to soils in the Great Plains, where the generally negative effects of land use change from prairie to annual cropland were a main focus. He found patterns consistent with the Tisdall and Oades (1982) model, including higher C contents in macroaggregates compared to microaggregates, but that the additional C was subject to rapid mineralization following aggre- gate disruption. Subsequent papers together with Cambardella (Elliott and Cambardella, 1991; Cambardella and Elliott, 1992, 1993a,b, 1994) dened and investigated physically-based fractions (using size and density fractionation), including particulate organic matter (POM) and a mineral-associated fraction, termed the enriched labile fraction (ELF). These fractions were postulated to represent SOM pools with intermediate turnover times (i.e., several years to a few decades) and, in fact, the bulk of the SOM impacted by land use and management. It was September 1995, when Six joined Elliott and Paustian at the Natural Resource Ecology Laboratory (NREL) in Fort Collins, Colorado to start his PhD research within a US National Science Foundation project titled Environmental and Management Con- trols on Soil Structure and Organic Matter Dynamics. The global objective of the project was to understand the controls on these intermediate SOM fractions and to quantify their role in organic matter and nutrient dynamics in agroecosystems e particularly with respect to soil disturbance (e.g., tillage) and its impact on soil structure and SOM dynamics. It must have been in one of the rst weekly meetings between student and advisors that Elliott told Six: In the beginning of your PhD work on this project, I will teach you a lot, but your goal is to teach me something new by the end of your PhD!. This statement was a continuous driving force throughout Sixs PhD. In the rst few experiments (Six et al., 1998, 1999, 2000c), soils from four different sites with a no-tillage, conventional tillage, and native vegetation treatment were fractionated into different aggregate size classes and aggregate-associated SOM fractions (POM and ELF) with a methodology similar to that used by Cambardella and Elliott (1993a,b, 1994) and Jastrow (1996). The main modication in the methodology was that intra-aggregate POM (iPOM) was split in two different fractions: coarse iPOM and ne iPOM. This division was the result of wanting to have two different size classes of sand (with which the two different size classes of iPOM are associated) to develop what was called the Normalized Stability Index (Six et al., 2000b). But once this sepa- ration was done, it was thought that the POM-C associated with the coarse and ne sand fractions could as well be measured instead of having, as originally intended, one combined fraction of iPOM. The expedient decision to separately analyze the two iPOM fractions turned out to be a lucky move because it formed the basis for using the ne to coarse iPOM ratio as an indicator for macroaggregate turnover and its inuence on soil C stabilization. It was the higher ratio of ne to coarse iPOM in no-tillage compared to conventional tillage soils that suggested a slower macroaggregate turnover in no- tillage, leading to greater stabilization of C in microaggregates- within-macroaggregates (Six et al., 1999). However, to really test the preferential stabilization of C in microaggregates-within- macroaggregates when macroaggregate turnover is slower due to less soil disturbance, a method was needed to isolate the micro- aggregates occluded within macroaggregates. One morning, some discarded materials (e.g. mesh, a funnel, plexiglass tubing, regular tubing, etc.) lying around in the Natural Resource Ecology Labora- tory were used to construct the microaggregate isolator (Six et al., 2000a) and a few days later microaggregates contained within macroaggregates were isolated from all four soils. Once their C was measured, the preferential stabilization of C in microaggregates in no-tillage soils was corroborated and formed the foundation for what was to become the Soil Biology & Biochemistry Citation Classic paper. Upon seeing the results Elliott acknowledged that he had unsuccessfully tried for many years to isolate microaggregates- within-macroaggregates, but now that it was nally accom- plished it corroborated some long-standing hypotheses. He said: Youve done what I have been trying to do for the last 15 years!. And there was a sense of the student having taught something to the advisor.
3. Opportunities and pitfalls
In the years following the publication of our Soil Biology & Biochemistry Citation Classic paper, several advances have been made. As a result, it has become clear what the strengths and weaknesses were of both the original methodology and its impli- cations for mechanistic understanding of soil C stabilization.
3.1. A diagnostic fraction for management effects on carbon storage
As indicated above, the results from four temperate soils under both long-term no-tillage and conventional tillage management indicated that greater amounts of C were protected inside the microaggregate-within-macroaggregate fraction in no-tillage soils. In follow-up work involving three no-tillage and conventional tillage experiments in widely varying soil types (Mollisol, Alsol, Oxisol) and environments (i.e. Nebraska, Kentucky, Brazil), we obtained further support for this preferential C stabilization by nding that over 90% of the difference in total SOC between no-tillage and con- ventional tillage could be accounted for by C associated with the microaggregates-within-macroaggregates (Denef et al., 2004) (Table 1). In a fourth experiment (also in Brazil) on a highly weath- ered Oxisol, we found that after ve years of no-tillage there was no signicant increase in microaggregate-within-macroaggregate C relative to conventional tillage, nor was there any difference in total SOC levels between no-tillage and conventional tillage (Denef et al., 2007). These initial ndings suggested that this microaggregate- within-macroaggregate C fraction may be a diagnostic fraction for changes in total SOC in response to changes in tillage management practices. In more recent studies (Table 1), we have further corrob- orated that microaggregate-within-macroaggregate C is a general diagnostic for management-induced changes in SOC levels in agro- ecosystems on a wide range of soil types and under drastically different climates (See Table 1). Hence, it represents an indicator of SOC storage capacity of best management practices as affected by factors, such as climate, soil type and management history. Furthermore, this fraction could provide a focal point for further elucidating mechanisms of SOM stabilization and turnover in soil, help explain the variability in the capacity of different soils to J. Six, K. Paustian / Soil Biology & Biochemistry 68 (2014) A4eA9 A6 A6 J. Six, K. Paustian / Soil Biology & Biochemistry 68 (2014) A4eA9
Table 1 Agricultural management effects on total soil organic C (TOC) and microaggregate-within-macroaggregate C (mM-C) stocks.
Soil type Location Soil classication Texture/dominant clay mineralogy Management change Depth (cm) Change in TOC (g C m 2 ) Contribution of mM-C (%) b
Reference Mollisol Sidney, NE (USA) Pachic Haplustoll Loam/2:1 a CT to NT 0e20 431 14 91 6 Denef et al. (2004) Aridisol Penaor, Spain Xerollic calciorthid Loam/2:1 CT to NT 0e20 465 49 49 20 Alvaro-Fuentes et al. (2009) Entisol/Alsol Davis, CA (USA) Typic Xerothent/ Mollic Haploxeralf Silt loam/Silty clay loam/2:1 RWC to RWL c 0e15 267 12 108 33 Kong et al. (2005)
Davis, CA (USA) Typic Xerothent/ Mollic Haploxeralf Silt loam/2:1 RWL to OMT c 0e15 323 24 61 30 Kong et al. (2005)
Davis, CA (USA) Typic Xerothent/ Mollic Haploxeralf Silt loam/2:1 CMT to OMT c 0e15 512 24 NS Kong et al. (2005) Alsol Wooster, OH (USA) Typic Fragiudalf Silt loam/2:1 CT to NT 0e20 2050 121 75 4 c Six et al. (unpublished)
Lexington, KY (USA) Typic Paleudalf Silt/mixed CT to NT (0 N) 0e20 617 95 81 7 Chung et al. (2008)
2:1 & 1:1 CT to NT (84 N) 0e20 607 72 82 9 Chung et al. (2008)
CT to NT (84 N) 0e20 968 104 93 8 Denef et al. (2004)
CT to NT (168 N) 0e20 678 85 109 13 Chung et al. (2008)
CT to NT (336 N) 0e20 745 179 112 32 Chung et al. (2008)
Lexington, KY (USA) Typic Paleudalf Silt/mixed 2:1 & 1:1 0 N to 168 N (CT only) 0e20 385 53 NS Chung et al. (2008)
Lexington, KY (USA) Typic Paleudalf Silt/mixed 2:1 & 1:1 0 N to 168 N (NT only) 0e20 446 85 49 12 c Chung et al. (2008) Ultisol Horseshoe Bend, GA (USA) Rhodic Kanhapludult Sandy loam/1:1 CT to NT 0e20 578 91 95 12 Simpson et al. (2004) Oxisol Passo Fundo (Brazil) Typic Haplorthox Clay/1:1 CT to NT 0e20 382 134 99 9 Denef et al. (2004) CT conventional tillage; NT no-tillage; NS no signicant difference in mM-C found for treatment comparison after t-test (P < 0.05), while signicant difference was found for TOC. RWC unfertilized rainfed wheat/fallow; RWL unfertilized rainfed wheat/rainfed legume cover crop; CMT conventional fertilized irrigated Maize/conventional fertilized irrigated tomato; OMT organic fertilized irrigated maize/organic fertilized irrigated tomato. a Lattice structure of dominant clay minerals (2:1 2:1 lattice structure, e.g. illite; 1:1 1:1 lattice structure, e.g. kaolinite). b Proportion of the total soil organic C response to management change that is accounted for by the change in microaggregate-within-macroaggregate C (mM-C) due to management. c Data for microaggregate-within-macroaggregate C obtained from microaggregates occluded within small macroaggregates (250e2000 mm) only, due to insufcient amounts of large macroaggregates (>2000 mm).
sequester C with conversion to best management practices, and provide a measurable and functionally meaningful fraction that can be incorporated into simulation models of SOM (Segoli et al., 2013).
3.2. Aggregates and soil biota
Earthworm and fungal activities have been linked to not only macroaggregate formation but also microaggregate formation (Shipitalo and Protz, 1989; Barois et al., 1993) and more specically the formation of microaggregates-within-macroaggregates with concomitant C stabilization within this fraction (Bossuyt et al. 2004, 2005; Simpson et al., 2004; Pulleman et al., 2005a,b; Fonte et al., 2007, 2010). Thin sections of the earthworm gut, casts and bulk soil from earthworm microcosms show that during gut transit, organic materials and minerals are intimately mixed and become encrusted with mucus (i.e. extracellular polysaccharides derived from gut microora) to form new microaggregates (Shipitalo and Protz, 1988, 1989; Barois et al., 1993). Also, based on thin section observations, biogenic macroaggregates in pasture soils containing many earth- worms had a four times greater proportion (w20%) of micro- aggregates than the equivalent macroaggregates of an arable soil (w5%) with few earthworms (Jongmans et al., 2001; Pulleman et al., 2005a). Furthermore, more ne POM was occluded in the micro- aggregates within biogenic macroaggregates than in microaggregates occluded within physicogenic macroaggregates (Pulleman et al., 2005a). After only 12 days of incubation with 13 C-labeled plant ma- terial, Bossuyt et al. (2004, 2005) found a four-fold greater mass of microaggregates-within-macroaggregates (i.e., 25% versus 6% of the macroaggregate mass consisted of microaggregates-within- macroaggregates) containing more new and protected C inside them when earthworms were present versus when they were absent. When comparing agroforestry and slash-and-burn systems with secondary forest from which they were derived, Fonte et al. (2010) observed that the microaggregate-within-macroaggregate fraction contained as much as 3.0 g C kg 1 soil less than in the secondary forest and this was mostly attributed to a loss in earthworm abundance with cultivation because the lower earthworm abundance leads to less formation of microaggregates-within-macroaggregates (Bossuyt et al., 2004). Fonte et al. (2007) found that earthworms increased the accumulation of newly added residue C into the microaggregate- within-macroaggregate fraction by 35% in low-input agroecosystems. Simpson et al. (2004), on the other hand, showed that microbial- derived C was more stabilized under no-tillage than conventional tillage management, mostly because fungal hyphae remain intact in no-tillage soils and hence improve soil structural stability with con- current deposition of fungal-derived C (indicated by glucosamine content) in microaggregates-within-macroaggregates. These results indicate clearly that earthworms and fungi have a direct and rapid impact on microaggregate formation and the stabilization of newly generated C, thereby indicating the biological origins of this fraction and its potential value in understanding the effect of soil management via biota on C stabilization.
3.3. Aggregates versus pores
In our 2000 paper we relied on the isolation of aggregate structures to understand generation, survival and cycling of soil C, but we know that organic matter decomposition and microbial activities, in fact, occur within the soil pores. Hence, in some sense, we are looking at the walls of a house to understand what is happening in the living-room. Another parallel that can be drawn is between inverse modeling and using aggregates to understand SOM dynamics, i.e., we are estimating C uxes/losses by quanti- fying what is stabilized within aggregates. This inverse relationship between aggregates and pores has been described by many (Elliott and Coleman, 1988; Dexter, 1988; Kay, 1990). Elliott and Coleman J. Six, K. Paustian / Soil Biology & Biochemistry 68 (2014) A4eA9 A7 A7 J. Six, K. Paustian / Soil Biology & Biochemistry 68 (2014) A4eA9
(1988) postulated a pore hierarchy analogous to the aggregate hi- erarchy concept of Tisdall and Oades (1982). They proposed that there are four hierarchical pore categories: (i) macro-pores; (ii) pore space between macroaggregates; (iii) pores between microaggregates-within-macroaggregates; and (iv) pores within microaggregates. Dexter (1988), on the other hand, formulated the porosity exclusion principle, which argues that aggregates of a lower hierarchical order exclude the pore spaces between the building blocks of aggregates of a higher hierarchical order. Finally, Kay (1990) argued that inorganic and organic stabilizing com- pounds (e.g. oxides, polysaccharides) with their general small di- mensions will predominantly stabilize microaggregates, but roots and hyphae will bind particles separated by greater pores e as earlier postulated by Tisdall and Oades (1982). Hence, the aggregate hierarchy concept and the pore exclusion principle both lead to the same hierarchical order of soil structure and associated binding agents. Even though this link has been clearly outlined, SOM dy- namic studies have focused much more on aggregates than on pores. One exceptional series of studies is, however, by Strong et al. (1998, 1999a,b,c) in which pore system measurements and ma- nipulations were used to elucidate the inuence of the soil matrix on N mineralization and nitrication. These studies clearly indicate the potential of a pore network approach to complement the aggregate-based approach to understand SOM dynamics.
3.4. Complimentary information from the aggregate approach
The usefulness of aggregate fractionation to understand soil functioning has been questioned with some justication (Young et al., 2001; Young and Ritz, 2000), but here we argue that the isolation of aggregates should be viewed as a complimentary tool to other techniques such as tomography (De Gryze et al., 2006), thin sectioning (Pulleman et al., 2005a,b), and synchrotron-based ana- lyses (Jastrow, personal communication); both isolating and viewing approaches provide complimentary information e not surprisingly because aggregates and their pores are closely con- nected (see Section 3.3). Since there is a continuum in aggregate stabilities, the functions of the isolated aggregates are very much dependent on the amount of energy used to isolate them. It is, therefore, no surprise that aggregate studies based on sieving have drawn some criticism: e collected aggregates may say little about the true structure of the soil, nor accurately simulate disaggregation processes that occur in the eld and sieving techniques provide little information as to how aggregates were connected in the original ped, i.e., their context in relation to the overall soil matrix is lost. (Young et al., 2001; Young and Ritz, 2000; Ashman et al., 2003). On the other hand, viewing the intact soil matrix through, for example to- mography or thin sections, does not reveal the properties and dy- namics in which we are interested. Furthermore, the dependency of aggregate distributions on the method used to separate them can be used to our advantage. Several studies (Elliott, 1986; Gregorich et al., 1989; Six et al., 2000d; Gale et al., 2000) have shown that comparing C associated with aggregates isolated using less destructive sieving methods (e.g. rewetting the soil by misting prior to wet sieving) versus aggregates isolated with the slaking method (Kemper et al., 1985) strongly supports (at least for 2:1 clay dominated mineral soils) the important role of SOM in holding smaller (<250 mm) stable aggregates together in larger (>250 mm) stable aggregates. This supports the aggregate hierarchy concept (Tisdall and Oades, 1982) and provides the framework for physical protection of soil C versus losses of soil C due to a loss of soil structure (Elliott, 1986). Hence, it is by comparing the results of different aggregate isolation methods that we can learn about the functioning of different organic binding agents (i.e. SOM compounds) at different scales in aggregates of different stabilities. Furthermore, better assessments of aggregate stability must rely on the measurement of different aggregate dis- tributions due to different levels of energy imposed on the soil (Six et al., 2000b) and can be related to different soil processes (see Fig. 1). Nonetheless, with the viewing techniques, we can focus on the soil morphology, which has the following advantages:
It is the ideal method to study the small-scale biogeography of microorganisms, e.g., what does the local microhabitat for bac- teria and fungi look like? The inherent small-scale soil variability can be assessed.
3.5. Aggregates and CO 2 plus N 2 O uxes
Since there is the link between C and N cycling and aggregate sizes, there is great temptation to use different aggregate size classes in order to elucidate the spatial and temporal variability of CO 2 and N 2 O uxes. However, the aggregate properties inuencing uxes, such as anaerobiosis and nutrient availability, are inevitably changed upon the isolation of the aggregates. The environmental conditions within an aggregate that determine the microbial activity are in part conferred by the constantly changing matrix surrounding the aggregate. For example, it is the connectivity between the aggregate and the sur- rounding soil matrix that will ultimately determine how anaerobic the inner-aggregate atmosphere is, even though the pore size distribution and connectivity within the aggregate itself is also of importance because it inuences microbial motility (Elliott and Coleman, 1988). Hence, measuring CO 2 and N 2 O uxes associated with different aggregate size classes will only give, at best, a rough indication of the potential uxes. Nevertheless, measurement of active microbial community structures across aggregate size classes can be done and help with elucidating C and N cycling, especially when combined with isotopes (Kong et al., 2010, 2011; Kong and Six, 2012).
4. Future
Since the publication of our paper, much research has been con- ducted in an attempt to further elucidate the properties, dynamics and responses of the microaggregate-within-macroaggregate frac- tion. However, here are a few things to consider for continued exploration of aggregates and SOM dynamics:
1) The microaggregate-within-macroaggregate fraction as a broadly applicable diagnostic fraction for SOM changes.
We have identied the microaggregate-within-macroaggregate fraction as a diagnostic for SOM changes induced by management across many soil types and climate regimes (Table 1). However, there
Fig. 1. The relationship between different aggregate stability measures and soil functions. J. Six, K. Paustian / Soil Biology & Biochemistry 68 (2014) A4eA9 A8 A8 J. Six, K. Paustian / Soil Biology & Biochemistry 68 (2014) A4eA9
are still many soil types and environments that need to be considered before we can state with full condence that the microaggregate- within-macroaggregate fraction is a highly accurate and broadly applicable diagnostic measure for total SOC changes in response to changes in management practices in terrestrial ecosystems. In particular, Andosols have not been examined and these soils do have a fundamentally different soil structure; one in which the microaggregate-within-macroaggregate fractions may not have the same diagnostic power. However, if the microaggregate-within-macroaggregate frac- tion is found to be truly diagnostic across most soil types and en- vironments, it would be of enormous signicance and lead to a rapid and better understanding of how management impacts SOM dynamics and C sequestration in the terrestrial biosphere. 2) Integration of physical and chemical aspects of SOM dynamics. The chemical characterization of whole soil SOM has a long history and has provided insights into SOM quality and dynamics, but it has ignored the inuence of the soil matrix. At the same time, the physical fractionation of SOM emphasizes the inuence of the soil matrix on SOM pool sizes and dynamics, but does not make the link with SOM chemistry. Hence, it is evident that combining the latest state-of-the-art techniques to physically separate SOM pools and subsequently to chemically characterize the various pools has great potential to further elucidate SOM dynamics. This is especially the case if isotope analyses can be supplemented to quantify transformation rates and turnovers. Research progress of this type is slow despite some excellent example studies (e.g., Golchin et al., 1995; Six et al., 2001; Gleixner et al., 2002; Kolbl and Kogel- Knabner, 2004; Carrington et al., 2012).
3) Integration of isolation and viewing of soil structures.
As indicated in Section 3.4, only a few studies (e.g., Pulleman et al., 2005a,b; Mueller et al., 2012) have integrated the isola- tion and viewing approaches even though it clearly has its po- tential to help us better understand how the soil matrix inuences SOM dynamics. Especially signicant are some of the latest syn- chrotron, spectroscopic, and tomography based techniques which have become much more accessible and have shown some great promises (Solomon et al., 2009; Nunan et al., 2003; Mueller et al., 2012).
4) The microaggregate-within-macroaggregate fraction as a model- able pool.
The potential to use the microaggregate-within-macroaggregate fraction as a measurable pool in SOM models has been suggested and implemented to a limited degree (Segoli et al., 2013). However, it is only when the previous three future endeavors are conducted that the microaggregate-within-macroaggregate fraction will begin to provide a measurable and functionally-meaningful fraction that could be incorporated into simulation models of SOM. The latter would be an enormous advance because it would allow for: 1) incorporating more mechanistic understanding in our SOM models; 2) a true validation of the internal structure of the model; and 3) calibrate and validate SOM models based on more than just comparing modeled and measured total C.
5. Conclusions
The relationship between aggregate stability and SOM had been investigated intensively, but our Soil Biology & Biochemistry Citation Classic paper added a dynamic dimension to this relationship by showing that it is the turnover of the macroaggregates that de- termines the stabilization of C within microaggregates. The logical consequence is that the microaggregate-within-macroaggregate fraction shows promising potential for early detection of changes in soil C arising from changes in management. However, that po- tential will only be realized if we further focus on elucidating the dynamics of this fraction in different soils under different climatic conditions across different ecosystems by applying isolation and viewing approaches and integrating the ndings into simulation models.
Acknowledgment
We thank Dr. Karolien Denef for putting together Table 1 and Dr. Steven De Gryze for putting together Fig. 1. We are grateful to Dr. Mirjam Pulleman for early discussions on isolating and viewing soil structure. We would also like to thank Dr. Richard Burns for inviting us to evaluate the use and signicance of our work on aggregation and soil organic matter.
References
Alvaro-Fuentes, J., Cantero-Martinez, C., Lopez, M.V., Paustian, K., Denef, K., Stewart, C.E., Arrue, J.L., 2009. Soil aggregation and soil organic carbon stabi- lization: effects of management in semiarid Mediterranean agroecosystems. Soil Science Society of America Journal 73, 1519e1529. Ashman, M.R., Hallett, P.D., Brookes, P.C., 2003. Are the links between soil aggregate size class, soil organic matter and respiration rate artefacts of the fractionation procedure? Soil Biology & Biochemistry 35, 435e444. Barois, I., Villemin, G., Lavelle, P., Toutain, F., 1993. Transformation of the soil structure through Pontoscolex corethrurus (Oligochaeta) intestinal tract. Geo- derma 56, 57e66. Bossuyt, H., Six, J., Hendrix, P., 2004. Rapid incorporation of carbon from fresh residue into newly formed stable microaggregates within earthworm casts. European Journal of Soil Science 55, 393e399. Bossuyt, H., Six, J., Hendrix, P., 2005. Protection of soil carbon by microaggregates within earthworm casts. Soil Biology & Biochemistry 37, 251e258. Bruce, J.P., Frome, M., Haites, E., Janzen, H., Lal, R., Paustian, K., 1999. Carbon sequestration in soils. Journal of Soil and Water Conservation 54, 382e389. Cambardella, C.A., Elliott, E.T., 1992. Particulate soil organic-matter changes across a grassland cultivation sequence. Soil Science Society of America Journal 56, 777e 783. Cambardella, C.A., Elliott, E.T., 1993a. Carbon and nitrogen distribution in aggregates from cultivated and native grassland soils. Soil Science Society of America Journal 57, 1071e1075. Cambardella, C.A., Elliott, E.T., 1993b. Methods for physical separation and charac- terization of soil organic matter fractions. Geoderma 56, 449e457. Cambardella, C.A., Elliott, E.T., 1994. Carbon and nitrogen dynamics of soil organic matter fractions from cultivated grassland soils. Soil Science Society of America Journal 58, 123e130. Carrington, E.M., Hernes, P.J., Dyda, R.Y., Plante, A.F., Six, J., 2012. Biochemical changes across a carbon saturation gradient: lignin, cutin, and suberin decomposition and stabilization in fractionated carbon pools. Soil Biology & Biochemistry 47, 179e190. Chung, H., Grove, J.H., Six, J., 2008. Indications for soil C saturation in a temperate agroecosystem. Soil Science Society of America Journal 72, 1132e1139. De Gryze, S., Jassogne, L., Six, J., Bossuyt, H., Herman, S., Wevers, M., Merckx, R., 2006. Pore structure changes during decomposition of fresh residue: X-ray tomography analyses. Geoderma 134, 82e96. Denef, K., Six, J., Merckx, R., Paustian, K., 2004. Carbon sequestration in micro- aggregates of no-tillage soils with different clay mineralogy. Soil Science Society of America Journal 68, 1935e1944. Denef, K., Zotarelli, L., Boddey, R.M., Six, J., 2007. Microaggregate-associated C as a diagnostic fraction for management-induced changes in soil organic carbon in two Oxisols. Soil Biology & Biochemistry 39, 1165e1172. Dexter, A.R., 1988. Advances in characterization of soil structure. Soil & Tillage Research 11, 199e238. Elliott, E.T., 1986. Aggregate structure and carbon, nitrogen, and phosphorus in native and cultivated soils. Soil Science Society of America Journal 50, 627e633. Elliott, E.T., Anderson, R.V., Coleman, D.C., Cole, C.V., 1980. Habitable pore space and microbial trophic interactions. Oikos 35, 327e335. Elliott, E.T., Cambardella, C.A., 1991. Physical separation of soil organic matter. Agriculture, Ecosystems, and Environment 34, 407e419. Elliott, E.T., Coleman, D.C., 1988. Let the soil work for us. Ecological Bulletins 39, 23e 32. Elliott, E.T., Paustian, K., Frey, S.D., 1996. Modeling the measurable or measuring the modelable; A hierarchical approach to isolating meaningful soil organic matter J. Six, K. Paustian / Soil Biology & Biochemistry 68 (2014) A4eA9 A9 A9 J. Six, K. Paustian / Soil Biology & Biochemistry 68 (2014) A4eA9
fractions. In: Powlson, D.S., Smith, P., Smith, J.O. (Eds.), Evaluation of Soil Organic Models. Springer-Verlag, Berlin Heidelberg, pp. 161e179. Fonte, S.J., Kong, A.Y.Y., van Kessel, C., Hendrix, P.F., Six, J., 2007. Inuence of earthworm activity on aggregate-associated carbon and nitrogen dynamics differs with agroecosystem management. Soil Biology & Biochemistry 39, 1014e 1022. Fonte, S.J., Barrios, E., Six, J., 2010. Earthworms, soil fertility and aggregate- associated soil organic matter dynamics in the Quesungual agroforestry sys- tem. Geoderma 155, 320e328. Gale, W.J., Cambardella, C.A., Bailey, T.B., 2000. Surface residue-and root-derived C in stable and unstable aggregates. Soil Science Society of America Journal 64, 196e201. Gleixner, G., Poirier, N., Bol, R., Balesdent, J., 2002. Molecular dynamics of organic matter in a cultivated soil. Organic Geochemistry 33, 357e366. Golchin, A., Oades, J.M., Skjemstad, J.O., Clarke, P., 1995. Structural and dynamic properties of soil organic matter as reected 13 C natural abundance, pyrolysis mass spectrometry and solid-state 13 C NMR spectroscopy in density fractions of an Oxisol under forest and pasture. Australian Journal of Soil Research 33, 59e76. Gregorich, E.G., Kachanoski, R.G., Voroney, R.P., 1989. Carbon mineralization in soil size fractions after various amounts of aggregate disruption. Journal of Soil Science 40, 649e659. Jastrow, J.D., 1996. Soil aggregate formation and the accrual of particulate and mineral-associated organic matter. Soil Biology & Biochemistry 28, 665e676. Jongmans, A.G., Pulleman, M.M., Marinissen, J.C.Y., 2001. Soil structure and earth- worm activity in a marine silt loam under pasture versus arable land. Biology Fertility Soils 33, 279e285. Kay, B.D., 1990. Rates of change of soil structure under different cropping systems. Advances in Soil Science 12, 1e52. Kemper, W.D., Rosenau, R., Nelson, S., 1985. Gas displacement and aggregate sta- bility of soils. Soil Science Society of America Journal 49, 25e28. Kolbl, A., Kogel-Knabner, I., 2004. Content and composition of free and occluded particulate organic matter in a differently textured arable Cambisol as revealed by solid-state 13 C NMR spectroscopy. Journal of Plant Nutrition and Soil Science 167, 45e53. Kong, A.Y., Six, J., Bryant, D.C., Denison, R.F., Van Kessel, C., 2005. The relationship between carbon input, aggregation, and soil organic carbon stabilization in sustainable cropping systems. Soil Science Society of America Journal 69, 1078e 1085. Kong, A.Y.Y., Hristova, K., Scow, K.M., Six, J., 2010. Impacts of different N manage- ment regimes on nitrier and denitrier communities and N cycling in soil microenvironments. Soil Biology & Biochemistry 42, 1523e1533. Kong, A.Y.Y., Scow, K.M., Crdova-Kreylos, A.L., Holmes, W.E., Six, J., 2011. Microbial community composition and carbon cycling within soil microenvironments of conventional, low-input, and organic cropping systems. Soil Biology & Biochemistry 43, 20e30. Kong, A.Y.Y., Six, J., 2012. Microbial community assimilation of cover crop rhizo- deposition within soil microenvironments in alternative and conventional cropping systems. Plant and Soil 356, 315e330. Lal, R., Follett, R.F., Kimble, J., Cole, C.V., 1999. Managing U.S. cropland to sequester carbon in soil. Journal of Soil and Water Conservation 54, 374e381. Mueller, C.W., Klbl, A., Hoeschen, C., Hillion, F., Heister, K., Herrmann, A.M., Kgel- Knabner, I., 2012. Submicron scale imaging of soil organic matter dynamics using NanoSIMS e from single particles to intact aggregates. Organic Geochemistry 42, 1476e1488. Nunan, N., Wu, K., Young, I.M., Crawford, J.W., Ritz, K., 2003. Spatial distribution of bacterial communities and their relationships with the micro-architecture of soil. FEMS Microbiology Ecology 44, 203e215. Paustian, K., Andren, O., Janzen, H.H., Lal, R., Smith, P., Tian, G., Tiessen, H., Van Noordwijk, M., Woomer, P.L., 1997. Agricultural soils as a sink to mitigate CO2 emissions. Soil Use and Management 13, 230e244. Pulleman, M.M., Six, J., Ujil, A., Marinissen, J.C.Y., Jongmans, A.G., 2005a. Earth- worms and management affect organic matter incorporation and micro- aggregate formation in agricultural soils. Applied Soil Ecology 29, 1e15. Pulleman, M.M., Six, J., Van Breemen, N., Jongmans, A.G., 2005b. Soil organic matter distribution and microaggregate characteristics as affected by agricultural man- agement and earthworm activity. European Journal of Soil Science 56, 453e467. Segoli, M., De Gryze, S., Dou, F., Lee, J., Post, W.M., Denef, K., Six, J., 2013. AggModel: a soil organic matter model with measurable pools for use in incubation studies. Ecological Modeling 263, 1e9. Shipitalo, M.J., Protz, R., 1988. Factors inuencing the dispersibility of clay in worm casts. Soil Science Society of America Journal 52, 764e769. Shipitalo, M.J., Protz, R., 1989. Chemistry and micromorphology of aggregation in earthworm casts. Geoderma 45, 357e374. Simpson, R.T., Frey, S.D., Six, J., Thiet, R.K., 2004. Preferential accumulation of mi- crobial carbon in aggregate structures of no-tillage soils. Soil Science Society of America Journal 68, 1249e1255. Six, J., Elliott, E.T., Paustian, K., 1999. Aggregate and soil organic matter dynamics under conventional and no-tillage systems. Soil Science Society of America Journal 63, 1350e1358. Six, J., Elliott, E.T., Paustian, K., 2000a. Soil macroaggregate turnover and micro- aggregate formation: a mechanism for C sequestration under no-tillage agri- culture. Soil Biology & Biochemistry 32, 2099e2103. Six, J., Elliott, E.T., Paustian, K., 2000b. Soil structure and soil organic matter: II. A normalized stability index and the effect of mineralogy. Soil Science Society of America Journal 64, 1042e1049. Six, J., Elliott, E.T., Paustian, K., Doran, J.W., 1998. Aggregation and soil organic matter accumulation in cultivated and native grassland soils. Soil Science So- ciety of America Journal 62, 1367e1377. Six, J., Guggenberger, G., Paustian, K., Haumaier, L., Elliott, E.T., Zech, W., 2001. Sources and composition of soil organic matter fractions between and within soil aggregates. European Journal of Soil Science 52, 607e618. Six, J., Merckx, R., Kimpe, K., Paustian, K., Elliott, E.T., 2000c. A re-evaluation of the enriched labile soil organic matter fraction. European Journal of Soil Science 51, 283e293. Six, J., Paustian, K., Elliott, E.T., Combrink, C., 2000d. Soil structure and organic matter: I. Distribution of aggregate-size classes and aggregate-associated car- bon. Soil Science Society of America Journal 64, 681e689. Solomon, D., Lehmann, J., Kinyangi, J., Liang, B.Q., Heymann, K., Dathe, L., Hanley, K., Wirick, S., Jacobsen, C., 2009. Carbon (1s) NEXAFS spectroscopy of bio- geochemically relevant reference organic compounds. Soil Science Society of America Journal 73, 1817e1830. Strong, D.T., Sale, P.W.G., Heylar, K.R., 1998. The inuence of the soil matrix on ni- trogen mineralisation and nitrication. II. The pore system as a framework for mapping the organisation of the soil matrix. Australian Journal of Soil Research 36, 855e872. Strong, D.T., Sale, P.W.G., Heylar, K.R., 1999a. The inuence of the soil matrix on nitrogen mineralisation and nitrication. III. Predictive utility of traditional variables and process location within pore system. Australian Journal of Soil Research 37, 137e149. Strong, D.T., Sale, P.W.G., Heylar, K.R., 1999b. The inuence of the soil matrix on nitrogen mineralisation and nitrication. IV. Texture. Australian Journal of Soil Research 37, 329e344. Strong, D.T., Sale, P.W.G., Heylar, K.R., 1999c. The inuence of the soil matrix on nitrogen mineralisation and nitrication. V. Microporosity and manganese. Australian Journal of Soil Research 37, 345e355. Tisdall, J.M., Oades, J.M., 1982. Organic matter and water-stable aggregates in soils. Journal of Soil Science 62, 141e163. Young, I.M., Crawford, J.W., Rappoldt, C., 2001. New methods and models for char- acterising structural heterogeneity of soil. Soil & Tillage Research 61, 33e45. Young, I.M., Ritz, K., 2000. Tillage, habitat space and function of soil microbes. Soil & Tillage Research 53, 201e213.