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BIO311C
Worksheet:Biomolecules
1.Draweachofthefollowingchemicalgroups.
a.carbonyl:
b.hydroxyl: c.sulfhydryl:
d.carboxyl:
e.phosphate:
f.amino:
2.Nameofthechemicalreactionthatbreaksapolymerdowntoitsindividualmonomers:_________________________________
3.Nameofthechemicalreactionusedtobuildpolymersbyjoiningindividualmonomerstogether:__________________________
4.Namethemonomersusedtobuildeachofthefollowingmacromolecules:
a.Lipids:_________________________________
b.Carbohydrates:__________________________
c.Proteins:________________________________
d.NucleicAcids:___________________________
5.Listthemajorfunctionsofthecarbohydrates.
6.Drawastraightchainaldohexose.Whichchemicalgroupsarealwaysfoundinastraightchainsugar?
7.Drawastraightchainketohexose,astructuralisomerofthealdohexoseabove.Whatarestructuralisomers?
8.Whatisthenameofthecovalentbondthatlinkscarbohydratemonomers?Betweenwhichchemicalgroupsdoesitform?
9.Usingthefigureshownatrightasareference:
(a)draw2moleculesofglucosejoinedbya1,4linkage
(b)draw2moleculesofglucosejoinedbya1,4linkage
(c)Writethemolecularformulaforeachdisaccharidedrawnabove
glucoseglucose:__________________________________________
glucoseglucose:__________________________________________
(d)Whatisthesignificancetomostanimalsifcarbohydratemonomersareconnectedbyorlinkages?
(e)Whichlinkagesarefoundin:
starch?_______________________________________________
glycogen?_____________________________________________
cellulose?______________________________________________
10.Listthemajorfunctionsofthedifferenttypesoflipids(triglycerides,phospholipidsandsteroids).
11.Whatcharacteristicisusedtocategorizedifferentlipidsinthesameclassofbiomolecules(whyaretriglycerides,phospholipids
andsteroidsgroupedtogether?)?
12a.Inthespacebelow,drawonesaturatedfattyacidmoleculeandoneunsaturatedfattyacidmolecule(bothcontaining12carbon
atoms).
12b.Writethemolecularformulaforeachmoleculeyouhavedrawnbelow:
Saturatedfattyacidmolecularformula:____________________
Unsaturatedfattyacidmolecularformula:__________________
12c.Whatisthedifferencebetweenasaturatedandunsaturatedfattyacid?
12d.Inthespacebelow,drawageometricisomeroftheunsaturatedfattyacidyoudrewin12a.Whataregeometricisomers?Label
eachofyourisomers(cisandtrans).
13.Inthespacebelow,drawglycerol.
14.Whatisthenameofthebondthatlinksfattyacidstoglycerol?Betweenwhichchemicalgroupsdothesebondsform?
15.Whatdetermineswhetheratriglycerideissolidorliquidatroomtemperature?
16a.Howdoesthechemicalcompositionofaphospholipiddifferfromthatofafat?
16b.Howdoesthebehavior(properties)ofaphospholipiddifferfromthatofafat(hint:thinkaboutwhatyoujustansweredabove).
17.Listthemajorfunctionsofproteinsincells/organisms.
18.DrawagenericaminoacidwiththesidechainlabeledR.Drawanenantiomerofyouraminoacid.Whatareenantiomers?
19.Drawtwogenericaminoacidsjoinedbyapeptidebond.Circlethepeptidebond.Betweenwhichchemicalgroupsdidthe
peptidebondform?
20.Whatisthedifferencebetweenapolypeptideandaprotein?
21.Foreachofthefollowingaminoacids,statewhetheritsRgroupispolar,polar&charged,ornonpolar.Wouldeachbe
hydrophobicorhydrophilic?
a.Leucine:________________________________________
b.Cysteine:_______________________________________
c.Glutamicacid:___________________________________
d.Tyrosine:_______________________________________
e.Serine:__________________________________________
f.Histidine:_______________________________________
22.Wouldyouexpectanaminoacidwithanonpolaraminoacidtobefoundontheexternalsurfaceofawatersolubleproteinor
buriedinternally?Explainyouranswer.
23a.Whattypeofbondsareimportantforprimaystructureofproteins?
23b.Whichatomsfromwhichchemicalgroupsareinvolvedintheprimarystructureofproteins?
23c.Listtwoaminoacidsyoumightfindinvolvedinprimarystructure.
24a.Whattypeofbondsareimportantforsecondarystructureofproteins?
24b.Whichatomsfromwhichchemicalgroupsareinvolvedinthesecondarystructureofproteins?
24c.Listtwoaminoacidsyoumightfindinvolvedinsecondarystructure.
24d.Listthetworegularpatternsofsecondarystructureseeninproteins.
25a.Bondsimportantforthetertiarystructureofproteinsoccurbetweenwhichpartsoftheaminoacidsinapolypeptide?
25b.Fillinthechartbelowdescribingthetypesofinteractionsinvolvedinthetertiarystructureofproteins.Inthethirdandfourth
columnsgive2examplesofaminoacidsthatmightbeinvolvedineachtypeofbond.
TYPEOFINTERACTION
STRONGORWEAK?
2AMINOACIDSINVOLVED
1.
2.
3.
4.
26.Whattypesofbondsareimportantindeterminingquaternarystructureofproteins?
27.Whatisdenaturation?Whichlevelsofproteinstructureare(usually)disruptedbydenaturation?
28.Listthemajorfunctionsofthenucleicacids.
29a.Labelthethreecomponentsofthenucleotideshownatright.
29b.Doesthisnucleotidecontainapurineorpyrimidine?
29c.Towhich2othernucleotidesmightthisnucleotidepair?
29d.IsthisaDNAnucleotideoranRNAnucleotide?Howcanyoutell?
30.Nameofthecovalentbondthatjoinsneighboringnucleotidesinapolynucleotidechain?Betweenwhichchemicalgroupsdoesit
form?
31a.WhattypeofbondsholdthetwostrandsofaDNAmoleculetogether?
31b.Betweenwhichcomponentsofthenucleotidesarethesebondsformed?
31c.ThetwostrandsinaDNAmoleculeareantiparallel.Explainwhatthismeans.
32.Whichfunctionalgroupisfoundatthe5endofanRNAmolecule?Atthe3endofanRNAmolecule?
33.ListthreedifferenttypesofRNAusedbythecell.Giveabriefdescriptionofthefunctionofeach.
34.ListtwodifferencesbetweenDNAandRNA.