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Culture Documents
Department of Chemical Engineering II, Lund Institute of Technology, P.O. Box 124, 221 00 Lund, Sweden
Department of Cell and Molecular Biology, Gteborg University, P.O. Box 462, 405 30 Gteborg, Sweden
Received 24 July 2001; received in revised form 28 January 2002; accepted 6 February 2002
Abstract
The present paper reviews the metabolic basis of different methods for fermentative glycerol production. The most important microbial
production organism is the yeast Saccharomyces cerevisiae but other yeast species, as well as molds, algae, and bacteria are of potential
interest for glycerol production. A large variety of methods have been applied to increase the fermentative glycerol yield. The first methods
were based on physiological control, e.g. chemically induced overproduction of glycerol through NADH entrapment by the addition
of chemical steering agents (such as bisulfite). More recently, genetic engineering of the glycolytic pathway has been used to improve
production, involving modulated function of e.g. triose phosphate isomerase, phosphoglycerate mutase, PDC or alcohol dehydrogenase.
Direct intervention in the glycerol pathway, such as overexpression of G3P dehydrogenase, has also been tried. The applied strategies can
be divided into three principal groups; (a) deactivation or down-regulation of NADH oxidation sites alternative to G3P dehydrogenase, (b)
increase of NADH generation or, (c) direct changes in the carbon flux to glycerol. 2002 Published by Elsevier Science Inc.
Keywords: Yeast; Glycerol; Osmoregulation; Redox; NADH; Genetic engineering
1. Introduction
Glycerol is a widely used chemical with many commercial
applications, presently finding its largest use in the manufacture of drugs and oral care products including toothpaste,
mouthwash and oral rinses. In addition, glycerol is used in
foods and cosmetics, tobacco, wrapping and packaging materials, lubricants, urethane polymers, gaskets, cork products, cement compounds, soldering compounds, compasses,
cleaning materials, detergents, wetting agents, emulsifiers,
skin protectives, asphalt, ceramics, photographic products,
leather and wood treatment and adhesives [1]. The current world production of glycerol amounts to 600,000 t/year.
Bulk production of glycerol can be achieved by any of
three different principal methods [14]: (a) glycerol is recovered as a by-product in fat and oil industries. The spent
lyes resulting from current soap making processes generally contain 815% glycerol. Sweet waters from hydrolysis of fats contain as much as 20% glycerol. (b) Glycerol
can be synthesized from propylene by a variety of methods. (c) Glycerol can be produced by fermentation, which is
the focus of this review. The glycerol formation accompa
54
concerning enhancement of glycerol production are classified according to their underlying principle.
2. Production microorganisms
Glycerol is a well-known metabolite formed by many microorganisms including bacteria, yeasts, molds, and algae
[8,9,11]. Consequently, there are a number of microorganisms, which are potential candidates for glycerol production
(cf. Table 1). Since glycerol often serves the function of
an osmolyte, balancing external osmotic pressure (e.g. cf.
Strain
Reference
Yeast
Saccharomyces cerevisiae
Saccharomyces ellipsoideus
Zygosaccharomyces rouxii
Saccharomyces mellis
Saccharomyces formonensis
Saccharomyces uvarum
Zygosaccharomyces acidifaciens
Torulopsis magnoliae
Candida stellata
Candida boidinii
Candida kefyr
Candida pseudotropicali
Candida veratilis
Pichia angusta
Pichia anomala
Pichia farinosa
Pichia miso
Kluyveromyces bulgaricus
Kluyveromyces lactis
Kluyveromyces marxianus
Hanseniaspora guilliermondii
Kloeckera apicula
Pachysolen tannophilus
[110,174,175]
[127,128,176179]
[73,170,180182]
[181,182]
[183]
[171,184]
[185]
[169]
[20]
[120,163,164]
[95]
[95]
[95]
[120]
[120]
[165,168,170,186]
[187]
[95]
[95]
[95]
[188]
[188]
[189]
Mold
Debaryomyces mogii
Rhizopus nigricans
Rhizopus javanicus
Botrytis cinerea
Aspergillus niger
[187]
[190]
[162]
[190]
[190]
Algae
Penicillum
Dunaliella
Dunaliella
Dunaliella
Dunaliella
[190]
[191,192]
[193,194]
[192]
[195]
Protozoa
Dunaliella bardawil
Trypanosoma cruzi
Leishmania mexic
[67]
[196]
[196]
Bacteria
Crithidia fasciculata
Bacillus subtilis
Bacillus coli
Bacillus welchii
Bacterium orleanense
Bacterium ascendens
Bacterium pasteurianum
Lactobacillus lycopersici
[196]
[197]
[113]
[113]
[198]
[198]
[198]
[199]
italicum
tertiolecta
salina
viridis
bioculata
55
Fig. 1. The sugar assimilation in glycolysis and TCA cycle in S. cerevisiae. NAD(P)+ , ADP, H+ , Pi , and CoA are not included in the picture for clarity.
Enzyme notations are:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
56
reoxidation of cytosolic NADH by direct delivery of reducing power to the respiratory chain. A comprehensive treatment of the importance of compartmentalization of NADH
metabolism was recently given by Bakker et al. [39].
Under anaerobic conditions the principal redox sink
in S. cerevisiae is the NADH coupled reduction of
dihydroxyacetone-phosphate (DHAP) to glycerol-3-phosphate
(G3P). This was first demonstrated by redox and carbon
balance studies [28,40] and given firm genetic evidence by
mutant studies [41,42]. The DHAP reduction is catalyzed
by NAD dependent glycerol-3-phosphate dehydrogenase
encoded by the two iso-genes, GPD1 and GPD2 [43,44].
The produced G3P is further dephosphorylated via a highly
specific phosphatase encoded by the iso-genes GPP1 and
GPP2 [45,46]. The isoenzymes of the glycerol pathway
appear to have distinct physiological roles [42,46]. For
example, only one iso-gene from each pair (GPD2 and
GPP1) is induced by shift to anaerobic conditions. Deletion
of either of these two genes results in defective anaerobic
growth, whereas deletion of either of the other iso-genes
(GPD1 or GPP2) is without anaerobic effects. Deletion of
both GPD1 and GPD2 or GPP1 and GPP2 leads to blocked
glycerol production and a completely inhibited anaerobic
growth. Norbeck and Blomberg [34] have demonstrated
the presence of enzymes/genes allowing for an alternative
glycerol pathway in S. cerevisiae, the dihydroxyacetone
(DHA) pathway. This route involves several genes (e.g.
GCY1), encoding a putative glycerol dehydrogenase and
two characterized genes, DAK1/DAK2, for dihydroxyacetone kinase, suggesting that the pathway functions in glycerol catabolism. Whether the pathway also has a role for
glycerol biosynthesis remains an open question.
57
and 1 mol of ATP (cf. Fig. 1). Regardless of the strategies appliedwhether this involves genetically engineering
strains or merely physiological controlthis cost must
somehow be paid. Obviously, a changed carbon flux necessarily involves changes in NADH formation/consumption
and ATP usage. Conversely, a change in NADH formation
will give a changed carbon flux. Nevertheless, strategies for
increasing glycerol production have taken different starting
points, as schematically described in Fig. 2. Genetic engineering was not used in the original processes from the
beginning of the century, although the basic ideas in these
studies were not fundamentally different from the ideas of
more recent genetic engineering work. (One of the oldest
strategies, i.e. the sulfite method introduced by Neuberg, is
based on the restriction of the NADH oxidation that occurs
in the reduction of acetaldehyde to ethanol, whereas one of
the most interesting new approaches, the work by Overkamp
et al. [76], is based on decreasing oxidation of cytosolically
generated NADH by deleting the genes encoding external
mitochondrial dehydrogenases NDE1/NDE2).
The strategy behind most of the applied methods for enhancing the production of glycerol is in a sense indirect,
since it aims at creating conditions during which the NADH
generation in metabolism is maximized. The consequent
carbon flux redistribution is caused by the necessity for
NAD regeneration, giving increased glycerol production. A
second strategy relies on direct interference with the carbon
flux, for example by blocking the isomerization reaction
between DHAP and GAP or by inhibiting the later part of
glycolysis. In this case, the redox balance will be distorted
causing a redistribution of fermentation products in order to
meet the need for generation of NADH. The latter strategy
can be accomplished for example by overexpression of enzymes in the glycerol pathway, such as glycerol-3-phosphate
dehydrogenase (GPD) and/or down regulation of enzymes
in the later part of glycolysis, such as ADH. In this case, the
increased glycerol formation results in a need for increased
NADH production, which has to be met by an increased
production of oxidized compounds, e.g. carboxylic acids.
The use of hyperosmotic conditions may represent a third
58
Table 2
Genetic engineering targets for improved glycerol production
Target enzyme
Known genes
Comment
Reference
TPI1
[79,80]
strategy, in which the signal transduction pathways are involved in the redirection of carbon and NADH flux as a
response to the direct cellular need of glycerol production.
The discussed strategies can be accomplished by genetic
engineering, by physiological controlthat is by influencing the cellular physiology, e.g. by the choice of growth
medium and growth conditions, and/or addition of steering
chemicalsor by a combination of genetic engineering and
physiological control.
4.1. Genetic engineering
As seen in Fig. 1, there are several potential target genes in
the glycolytic, glycerol, and the respiratory pathways. Some
of the targets that have been examined are given in Table 2.
4.1.1. Glycolytic targets
4.1.1.1. Triose phosphate isomerase. The glycolytic
enzyme triose-phosphate-isomerase (TPI) catalyzes the
conversion of dihydroxyacetone-phosphate (DHAP) to
glyceraldehyde-3-phosphate (Fig. 1). The isomerase is encoded by the TPI1 gene in S. cerevisiae. A deficiency in
TPI activity has been shown to give rise to accumulation of DHAP [77,78]. In a TPI-mutant strain, completely
lacking TPI activity, the net energy gain from glycolysis
would be zero. Therefore, the strain will only be able to
grow by respiratory metabolism. The maximum theoretical
yield of glycerol from glucose in this strain is 1 mol/mol
(corresponding to 0.51 g/g). Compagno et al. [79] used a
TPI-mutant strain to produce glycerol from glucose, and
reported a glycerol yield as high as 85% of the theoretical
yield. However, a concentration of glucose >0.1 M was
needed for the conversion to proceed [80]. Interestingly,
iron limitation is reported to result in increased glycerol
production [81,82] and was observed to decrease the stability of the TP11 mRNA, leading to an about three-fold
decreased gene expression [81].
4.1.1.2. Phosphoglycerate mutase. Phosphoglycerate mutase (GPM) converts 3-phosphoglycerate into 2-phosphoglycerate in the later part of the glycolytic pathway (Fig. 1).
[83]
[84]
[85]
[90]
[34]
[38,76]
S. cerevisiae [88,89]. Michnick et al. [90] increased the glycerol formation by a factor of 4 from 0.069 to 0.275 mol/mol
(0.0350.14 g/g), by overexpression of GPD1 in S. cerevisiae at the expense of ethanol. A similar study was carried
out by Remize et al. [21], where overexpression of Gpd1p
was analyzed in nine strains of S. cerevisiae. Glycerol
production increased between 1.5- and 2.5-fold in the examined strains. The biomass and ethanol yield decreased,
whereas the yields of pyruvate, acetate, acetaldehyde,
2,3-butanediol, succinate and acetoin increased. Notably,
by-product formation was considerably strain dependent.
An even higher overexpression of GPD1 was achieved in
experiments by Nevoigt and Stahl [84] who reported up to
6.5 times increased glycerol yield. Somewhat surprisingly,
overexpression of GPP1 or GPP2, resulting in an up to
50-fold increased glycerol-3-phosphatase activity, did not
appear to significantly affect glycerol production [46].
4.1.3. Targets in the respiratory pathway
4.1.3.1. External NADH dehydrogenases and glycerol utilization enzymes. Glycerol is perhaps most often considered as being an anaerobic end product. However, high
yields of glycerol can also be attained under aerobic conditions. One glucose molecule catabolized via glycolysis
and the TCA cycle produces 10 NADH molecules (cf.
Fig. 1), some of which could be used for DHAP reduction.
However, even when neglecting the limitation caused by
compartmentalization, all this NADH cannot be utilized for
DHAP reduction, since the ATP demand for glycerol formation must be met. This requires that part of the NADH
formed is oxidized in the respiratory chain. The necessary
amount will depend on the P/O ratio, i.e. the ratio between
moles of ATP formed and moles of oxygen (O) consumed.
A simple calculation (assuming the same ATP yield from
FADH and NADH) gives a maximum theoretical glycerol yield of 1.582 mol/mol (0.81 g/g), for a P/O ratio of
1 and 1.6 mol/mol (0.82 g/g) for a P/O ratio of 2. More
importantly, however, the inner mitochondrial membrane is
impermeable to NADH, which will impose a more severe
restriction on the maximum theoretical glycerol yield, since
only cytosolic NADH is available for DHAP reduction.
Overkamp et al. [76] conducted aerobic chemostat studies
of strains of S. cerevisiae, in which the two genes encoding the external mitochondrial NADH dehydrogenases,
NDE1 and NDE2, had been deleted. The NADH generated
in the cytosol could thus not be oxidized via the action
of these dehydrogenases, and an increased glycerol yield
might be expected from the need to regenerate cytosolic
NAD+ . However, up to a dilution rate of 0.1/h, very little formation of glycerol was found, suggesting that the
glycerol utilization pathway involving the mitochondrial
glycerol-3-phosphate dehydrogenase encoded by the GUT2
gene, was active. At higher dilution rates, the glycerol yield
increased, reaching a maximum of about 0.33 mol/mol
(0.17 g/g) at a dilution rate of about 0.2/h. Above the
59
60
sodium carbonate other salts such as Na, K, or NH4 carbonate, bicarbonate, acetate, phosphate and hydroxide have also
been used as buffers to increase the pH value for alkaline
glycerol production [96,134136].
4.2.3. The effects of the nitrogen source
Albers et al. [25] reported a large effect of the nitrogen
source on the anaerobic glycerol production by S. cerevisiae.
Use of ammonium sulphate as nitrogen source resulted in
a higher yield of glycerol, compared to the use of glutamate or a mixture of amino acids. This difference can be
explained from the NADH formation that is associated with
amino acid synthesis [25]. It has also been reported that the
activity of ADH is decreased when amino acids rather than
ammonium salts are used as nitrogen source [137], resulting
in an increased glycerol yield.
4.2.4. Osmotic stress
A vital feature of the events that are initiated by yeast cells
in response to hyperosmotic stress is the osmostress-induced
accumulation of glycerol [138,139]. In S. cerevisiae, this
response is dependent on the stress-activated HOG pathway
[64,140]. This signaling pathway senses the stress condition,
evaluates its severity and adjusts expression of appropriate
genes to counteract the toxic stress effects. At the very heart
of this pathway is a MAP kinase module consisting of a cascade of kinases, that when activated, phosphorylates and activates the MAP kinase, Hog1p [141,142]. The high osmolarity stress is sensed by two distinct plasma membrane sensor
systems that converge via different signal transduction systems at the MAP kinase activator protein, Pbs2p. One of the
branches is defined by the Sln1pYpd1pSsk1p multicomponent system [143], the other by the Sho1p plasma membrane sensor protein [142]. In the activated pathway Pbs2p
phosphorylates Hog1p [141], which is then rapidly transferred to the nucleus to promote activation of gene expression [144]. Since Hog1p is a well-conserved stress-activated
MAP kinase, with counterparts in many other organisms
[145], it is likely that similar osmosensing and signalling systems may operate in other organisms. This is supported by
the recently described and analogous Sty1p pathway in the
distantly related S. pombe (reviewed in [139]). In an effort to
identify the target genes of the HOG pathway, genome-wide
transcriptional responses of wild type and hog1p mutants
have been analyzed following exposure of the cells to high
osmolarity [146,147]. The complex nature of the response
is clearly indicated by the fact that a shift to 0.4 M NaCl resulted in a more than five-fold transient induction of about
7% of the genes encoded in the entire yeast genome. The
HOG pathway was required for full induction of many but
not all of the responding genes, whereas the most strongly responsive were highly or completely dependent on this pathway for their activation. Among the genes that were most
sharply induced by osmotic stress were GPD1 and GPP2 of
the glycerol pathway, but also genes encoding plasma membrane sugar transporters such as SLT1 and HXT10 as well
Table 3
Industrial carbon sources for glycerol production
Carbon source
Beet sugar molasses
Sugar cane molasses
Cane juice
Grape juice
Starch
Lignocellulose
Xylose
Whey permeate
Enzyme-hydrolyzed lactose
Methanol
Microorganism used
S. cerevisiae
A. niger
P. italicum
R. nigricans
B. cinerea
Z. acidifaciens
S. cerevisiae
R. javanicus
K. marxianus
P. farinosa
C. boidinii
Reference
[200]
[118,201]
[183]
[110,190]
[156,157]
[158]
[162]
[95]
[95]
[163,164]
61
6. Fermentation technology
Batch fermentation using shake flask cultivations
(semi-aerobic by using cotton-plugged flasks or anaerobic
by using loop-traps) is most commonly used in laboratory
experiments due to its simplicity. One obvious drawback
with these systems is that temperature is usually the only
variable that can be accurately controlled. Use of a bioreactor gives the added possibility of accurately controlling
the pH value, which has indeed been found to be an important parameter in a number of genetic and physiological
approaches of glycerol enhancement.
Fed-batch operation is experimentally somewhat more
demanding, but gives certain advantages. The most important advantage of fed-batch compared to batch cultivation
is that effects of inhibitors, such as steering chemicals, can
be minimized since their concentration in the medium can
be kept low [15,165168]. In addition, by using fed-batch
technique, it is possible to maintain limitation of a certain
substrate component, such as phosphate in the cultivation of
the osmophilic yeast Torulopsis magnoliae [169]. Very high
glycerol concentrations can be obtained using fed-batch
cultivation [165].
Continuous cultivation shares several advantages with
fed-batch cultivation, although the risk of contamination is
increased. A continuous process based on the sulfite method
was found to work satisfactorily [99]. However, the low
concentration of biomass, which decreases the volumetric
glycerol productivity, may be considered a serious drawback
of continuous cultivation. Cell immobilization or recycling
has been applied in order to provide a high cell density in the
bioreactor. Centrifuging and recycling of the cells resulted
in an increased production rate of the glycerol [170], and
cell immobilization was reported to significantly increase
62
7. Conclusion
Fermentative production of glycerol has a long and varied
history. With the exception of wartimes, fermentative glycerol production has normally not been economically competitive with other production methods. Technological progress
in terms of downstream processing, cultivation technology
and genetic engineering, in combination with increased consumer requirements of green chemistry can be expected
to change that situation in the near future.
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64
[147]
[148]
[149]
[150]
[151]
[152]
[153]
[154]
[155]
[156]
[157]
[158]
[159]
[160]
[161]
[162]
[163]
[164]
[165]
[166]
[167]
[168]
[169]
[170]
65
66