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CHEM 3013
ORGANIC CHEMISTRY I
LECTURE NOTES
CHAPTER 2
1.
Formal Charge
The Lewis structures we have drawn thus far have all been neutral covalent
molecules. However, some covalently bonded molecules may contain charged atomic
components. Furthermore, many ionic species also contain covalent bonds. To manage
the electronic bookkeeping we assign a formal charge to each of the atoms of a structure.
The formula , Formal Charge = Valence Electrons - 1/2( Bonding Electrons) - N onBonding Electrons will be used for this purpose.
H
H
For Nitrogen
FC = VE-(1/2BE + NBE)
FC = 5 - ( 8/2 + 0) = 1
For Hydrogen
FC = VE-(1/2BE + NBE)
FC = 1 - (2/2 + 0) = 0
H
Nitrogen bears the positive charge
Pauling
2.5
Electroneg.
3.0
H 3C
E.NEG = 0.5
3.
Dipole Moments
The polarization of a covalent bond (separation of charge densities) gives rise to a
dipole along the internuclear axis. This dipole is a measurable quantity which is exerted
in a localized direction ( a vector). The dipole moment, is a product of the charge
separation in electrostatic units, q,( esu), the bond length, r, (A) and a constant term (1010
debye/esu . A ).
2
F
H
H
= 2.76 D
No Net Dipole
F
F
C
F
= q x r x 1010 debye/esu A
Y
A vector can be resolved into it's
three component directions.
A combination of dipole moments
may result in a net cancellation.
X
Bond Dipoles
4.
Resonance Structures
Resonance structures are groups of Lewis-type representations which differ only in
the position of localized electron density. A resonance structure is a formula which can be
written which involves the movements of bonds, unshared electron pairs, single electrons
or charges. It is important to understand that atoms stay fixed in space in resonance
structures, only electrons are shared over one atom. Structures which involve the
movement of atoms are not valid resonance forms. The standard rules for writing valid
Lewis structures (octet rule, no pentavalent carbons, etc.) apply for resonance forms.
Two possible Lewis Structures for the acetate ion: CH3COO
O a
H
C
H H
O b
For Oxygen a: FC = 0
For Oxygen b: FC = -1
O
C
C
H H
O b
FC = -1
FC = 0
RESONANCE STRUCTURES
O
H
- 1/2
C
H H
O - 1/2
3
chemical species being discussed. Resonance and equilibrium ARE NOT THE
SAME THING .
A molecule is a weighted average of all its contributing resonance structures. The
structural depiction of the weighted average is called the Resonance Hybrid . The best
real world analogy for a resonance hybrid would be to consider a biological hybrid formed
when two related species form offspring. A good example of this is the mule, a hybrid
formed in the crossing of a horse and a donkey. A mule is always a mule, it show some
characteristics of horses and some of donkeys, but it is always a mule. It never spends part
of its time as a horse and part of its time as a donkey ( this would be like equilibrium).\
While a molecule is an average of its contributing resonance structures, it need not
be true that all resonance forms contribute equally. To assess the weighting of the
contributions we examine the various structures and consider their stability as if they were
real individual molecules ( which , of course, they are not). The forms that have the
greatest stability are the forms which have the greatest contribution to the resonance hybrid.
1. Identical structures contribute equally.
H
C
H
C
CH2
CH2
CH2
CH2
allyl anion
H2C
H2C
CH2
H2C
CH2
CH2
BEST
3. Structures that delocalize charge or unshared electrons are important
H2C
H2C
O
CH3
CH3
H3C
H3C
H3C
H3C
BEST
4
5.
H+
A-
Ka = H+
A-
1/Ka
HA
pKa = - log Ka
HOH
H+ + HO
Ka = 10-16
pKa = 16
Equilibrium lies to the left,
water is only slightly ionized.
Water is a relatively weak acid.
6.
5
HA
acid
NH3 +
pKa = 35
B:base
H-B
+
conjugate
acid
A:conjugate
base
HO:-
HOH
+
pKa = 16
:NH2-
7.
A Lewis acid is defined as an electron acceptor. They are species which are at least one
electron pair short of a filled outer shell configuration(either octet or duet), because of this they are
very reactive toward electron sources. Another term for Lewis acids is electrophiles (electron
loving species).Typically, a Lewis acid is a cation , (e.g. H+, Li+, (CH 3)3C+) or a metal atom in
a salt.A Bronstead acid (proton source) is also a Lewis acid
A Lewis base is defined as an electron donor. They are species that react with Lewis acids
by supplying an electron pair. Another name for Lewis bases is nucleophiles (nucleus loving
species). A typical Lewis base is an anion (e.g. OH-) or a neutral heteroatom with at least one pair
of non-bonding electrons (e.g. :NH 3).
A Lewis acid must have available a low energy empty orbital to accept an
electron pair from the Lewis base.
empty orbital
F
F
B F
F
Flouride anion
Lewis base
Boron triflouride
Lewis acid
B F
F
Tetrafluoroborate anion
Combustion Analysis
6
Weight H in sample = weight H2O x (2.016g H / 18.016 g H2O)
Weight C in Sample = weight CO2 x (12.01 g C / 44.01 g CO2)
% H in Sample = Weight H in sample / sample weight
% C in Sample = Weight C in Sample / sample weight