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ScienceDirectResults

KEYWORDS:Proteomics,Biofuel,MassSpectroscopy,2DE,electrophoresis,
isoelectricfocusing,iTRAQ,fluorescencemicroscopy
MethodsCatalogued:DIGE,2DE,PAGE,MS,IEF,FM,iTRAQ
1. ReviewofthealgalbiologyprogramwithintheNationalAllianceforAdvanced
BiofuelsandBioproductsGCMS,PAGE,LCMS,FM
2. CharacterizationofPicochlorumsp.useofwastewatergeneratedfrom
hydrothermalliquefactionasanitrogensourceLCMS,ITRAQ
3. Improvedbiomassdegradationusingfungalglucuronoylesteraseshydrolysisof
naturalcornfibersubstrateMS,PAGE
4. Metabolomics:anemergingfrontierofsystemsbiologyinmarinemacrophytes
MS(MALDITOF,LC,GC)
5. KnowledgemanagementinawastebasedbiorefineryintheQbDparadigm
2DE,MS,FM
6. SinglecellstableisotopeprobinginmicrobiologyusingRaman
microspectroscopyMS
7. HbIDI,SlIDIandEcIDI:Acomparativestudyofisopentenyldiphosphate
isomeraseactivityandstructureMS(checkrelevance!)
8. AputativemagnesiumtransporterSlr1216involvedinsodiumtolerancein
cyanobacteriumSynechocystissp.PCC6803MS(LC,GC)
9. ProteomeresponseofPhaeodactylumtricornutum,duringlipidaccumulation
inducedbynitrogendepletionMS(TOF),iTRAQ,FM???
10. ProteomicanalysisofposttranslationalmodificationsincyanobacteriaMS,
iTRAQ,SDSPAGE,2DE
11. ExploringtheproteomiccharacteristicsoftheEscherichiacoliBandK12strains
indifferentcellularcompartmentsiTRAQ,2DE,MS,PAGE(BNandMS)
12. Absolutequantificationofproteinsinthefattyacidbiosyntheticpathwayusing
proteinstandardabsolutequantificationiTRAQ,IEF???,PAGE(SDS),MS(GC,
LC)
13. Jatrophacurcasphytotomyandapplications:Developmentasapotentialbiofuel
plantthroughbiotechnologicaladvancementsIEF???,PAGE(SDS)
14. Differentialproteomicanalysisofembryogeniclinesinoilpalm(Elaeisguineensis
Jacq)MS(LC),SDSPAGE,2DE,IEF
15. Proteomicapproachrevealsthatstarchdegradationcontributestoanthocyanin
accumulationintuberousrootofpurplesweetpotatoIEF,2DE,MS
(MALDITOF),SDSPAGE
16. MolecularcharacterizationofglycosylhydrolasesofTrichodermaharzianum
WF5Apotentialstrainisolatedfromdecayingwoodandtheirapplicationin

bioconversionofpoplarwoodtoethanolunderseparatehydrolysisand
fermentationIEF???
17. GH10XynAisthemainxylanaseidentifiedinthecrudeenzymaticextractof
Paenibacillussp.A59whengrownonxylanorlignocellulosicbiomass2DE,
SDSPAGE,MS,IEF
18. Cloningwithkineticandthermodynamicinsightofanovelhyperthermostable
glucosidasefromThermotoganaphthophilaRKU10Twithexcellentglucose
toleranceSDSPAGE,IEF???
19. Proteomicandbiophysicalanalysesrevealametabolicshiftinnitrogendeprived
Nannochloropsisoculata2DE,MS(GC,LC),FM
20. ReviewofthealgalbiologyprogramwithintheNationalAllianceforAdvanced
BiofuelsandBioproductsMS(GC),SDSPAGE
21. Quantitativeproteomicanalysisoftwodifferentricevarietiesrevealsthatdrought
toleranceiscorrelatedwithreducedabundanceofphotosyntheticmachineryand
increasedabundanceofClpD1proteaseSDSPAGE,MS(LC,Tandem)
22. Proteomicpatternsassociatedwithheterosis2DE,MS(LC)
23. Quantitativeproteomicsrevealsthemechanismandconsequenceof
gliotoxinmediateddysregulationofthemethioninecycleinAspergillusnigerMS
(LC),SDSPAGE
24. Currentadvancesinmolecular,biochemical,andcomputationalmodeling
analysisofmicroalgaltriacylglycerolbiosynthesisMS(LC)
25. Cloning,bioinformaticsandtranscriptionalanalysisofcaffeoylcoenzymeA
3OmethyltransferaseinswitchgrassunderabioticstressIEF,electrophoresis
(whattype???)
26. Knockdownofphosphoenolpyruvatecarboxykinaseincreasescarbonfluxtolipid
synthesisinPhaeodactylumtricornutumFMCHECKRELEVANCE
27. Truncationsofxyloglucanxylosyltransferase2provideinsightsintotherolesof
theNandCterminusSDSPAGE,MS(MALDITOF),SDSPAGE,
28. HbIDI,SlIDIandEcIDI:Acomparativestudyofisopentenyldiphosphate
isomeraseactivityandstructureMS(GC),PAGECHECKRELEVANCE
29. Thepotentialofthemevalonatepathwayforenhancedisoprenoidproduction
MC(GC/LC)
30. CharacterizingStrainVariationinEngineeredE.coliUsingaMultiOmicsBased
WorkflowCANTACCESSFULLARTICLE
31. Quantitativemassspectrometrybasedmultiplexingcomparestheabundanceof
5000S.cerevisiaeproteinsacross10carbonsourcesMS(LC)CHECK
RELEVANCE
32. SynergismofproteomicsandmRNAsequencingforenzymediscoveryMS
(LC/GC),2DE

33. Principalcomponentanalysisofproteomics(PCAP)asatooltodirectmetabolic
engineeringMS
34. AdvancesinproteomicsforproductionstrainanalysisMS,2DE,IEF,DIGE,
iTRAQ
35. AnalysisofthemolecularresponseofPseudomonasputidaKT2440tothe
nextgenerationbiofuelnbutanol2DE,MS,PAGE,DIGE
36. Proteomicandbiochemicalresponsesofcanola(BrassicanapusL.)exposedto
salinitystressandexogenouslipoicacidMS,PAGE,IEF
37. ProteomicanalysisofoilbodiesinmatureJatrophacurcasseedswithdifferent
lipidcontentMS,2DE,IEF,FM,PAGE
38. ChapterThreeGlycosylationofCellulases:EngineeringBetterEnzymesfor
BiofuelsMS,IEF
39. MechanismsofammoniumassimilationbyChlorellavulgarisF1068:Isotope
fractionationandproteomicapproaches2DE,MS,PAGE,IEF
40. ReviewofthealgalbiologyprogramwithintheNationalAllianceforAdvanced
BiofuelsandBioproductsMS(GC,LC),SDSPAGE,FM
41. QuantitativeproteomicanalysisoftheSaccharomycescerevisiaeindustrial
strainsCAT1andPE2iTRAQ,MS
42. ProteomicanalysisoftheeconomicseaweedPyropiahaitanensisinresponseto
desiccationMS,2DE,IEF,PAGE
43. Proteomicapproachrevealsthatstarchdegradationcontributestoanthocyanin
accumulationintuberousrootofpurplesweetpotatoMS,PAGE,2DE,IEF
44. Differentialproteomicanalysisofembryogeniclinesinoilpalm(Elaeisguineensis
Jacq)MS,2DE,IEF,PAGE
45. Validationofthemetabolicpathwayofthealginatederivedmonomerin
Saccharophagusdegradans240Tbygaschromatographymassspectrometry
PAGE,MS
46.
47.

REFRENCE(notfortable):

ThePostgenomicEraofTrichodermareesei:What'sNext?
FungalEnzymesforBioProductsfromSustainableandWasteBiomass
Thebreakdownoflignocelluloseintheplantcellwallrequirestherecruitmentofglycoside
hydrolaseswithdifferentmechanismsofactioninaconcertedactionwithligninases.


Genomic,transcriptomic,proteomic,andinteractomicanalysesareexcellenttoolsforunraveling
complexnetworksinvolvedinenzymemediatedhydrolysisoflignocellulose.

48. 8/22

WHEREYOULEFTOFF!!!(25perpage)

SynergismofproteomicsandmRNAsequencingforenzymediscovery
DIGE

2DE

PAGE

MS

IEF

FM

iTRAQ

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