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Title:
COMMUNICATION: FROM MOLECULES TO MARS
Author:
Calvin, Melvin
Publication Date:
08-01-1962
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U C R L 10424
UNIVERSITY O F CALIFORNIA
Lawerence Radiation Laboratory
Berkeley, California
C o n t r a c t No. W - 7 4 0 5 - e n g - 4 8
COMMUNICATION: F R O M M O L E C U L E S T O M A R S
Melvin Calvin
A u g u s t 1962
U C R L 10424
Melvin Calvin
Department of Chemistry & Lawrence Radiation ~ a b o r a t o r ~ * *
University of California, Berkeley 4 , California
Abstract
August 23, 1962
An analysis i s made of the energetic, molecular, m x r o m o l e c u l a r and
organizational steps which appear
is presented.
The combination of t h e s e small units and the polymers via the univers a l dehydration condensation reaction under the influence of py rophosphate
o r carbon- to-nitrogen multiple bonds i s experimentally provided. These
macromolecules a r e shown to a s s u m e specific configuratione resulting
f r o m intrinsic f a c t o r s in their s t r u c t u r e , and mechanisms for information
t r a n s f e r and energy t r a n s f e r by virtue of these ordered s t r u c t u r e s a r e
described.
UCRL 10424
Some
Ib
**
M elvin Calvin
D e p a r t m e n t of C h e m i s t r y and L a w r e n c e Radiation L a b o r a t o r y
University of California, B e r k e l e y 4, California
**
INTRODUCTION
**
1-7
p r e s e n t day
i'he d e g r e e of s u c c c s s of a v a r i e t y o f t h e s e e x p e r i m e n t s h a s ,
Up until now, dl o u r knowledge about tho nature of tho extrat e r r e s t r i a l universe has been baaed entiroly upon tho infonnrtioa that b a
bean c a r r i e d to us b y tlectromagnetic radiation (until rscontly only
visible light, now we m a y add radiofrequency waves) from elrowhero.
However, we a r e about to begin ( o r , in fact, have already begun) an exploration of the space beyond the reachea of the e a r t h ' r atmoephere and
will soon be exploring not only our own satellite, the Moon, but our two
n e a r e s t planetary neighbors, Venus and M a r s .
H e r s we will be able to
get direct first-hand information not only about the nature of t h t materialo
of which these objects a r e constructed, but a l s o about the possible exietence on their surface either of m a t t e r which we woulg be willing to call
living, o r of m a t t e r which might have ultimately given riee to living
things, o r be the residue of living things.
We a r e even beginning
11
Per-
p a r t i c u l a r concatenation of p r o p e r t i e s of a m o l e c u l a r s y s t e m which
might be acceptable to everyone a s living, I would ratherlecognize
the difficulty of satisfying everyone, and simply take two of the qualities
which everyone will a g r e e a r e c e r t a i n l y basic a t t r i b u t e s of a living
s y s t e m and t r y to d e s c r i b e the sequence of events which might have
produced them f r o m nonliving origins.
'l'hese two p r o c z s s e s which I think mosl, if not a l l of u s , would
a g r e e upon a s being p e r q u i s i t e s of present-day living s y s t e m s a r e
( 1 ) t h e i r ability to t r a n s f a r and t r a n s t o r m energy in a directed way
and ( 2 ) t h e i r ability to r e m e m b e r how to do this, once having l e a r n e d
information.
the f i r s t .
transformation.
Wlolecular C o n s ~ r u c t i o n
In any c a s e , the rriaterials of which the living o r g a n i s m i s cons t r u c t e d a r e known
KO
us ( o r a t l e a s t a good m a n y of
LO
The
ITIOSL
f o r m a t i o n of the e a r t h itself.
12
ATOM
MOLECULE
POLYMER
Hydrogen
Carbon
Sugar
0 xygen
Base
[~ucleicAcid
N itrogen
Acid
Lipid
It i s in-
.7 billion years.
13,14
UCRL-10424
IN
MILLIONS
OF YEARS
GEOLOGIC
ERA
EVENTS
Earliest Vertebrates
Earliest known Fossils
(Cambrian)
Organic Evolution
Chemical Evolution
Formation of the
present earth
5000
Figure 2.
T i m e s c a l e for t o t a l evolution.
produce one.
A s i m i l a r calculation f o r
magnitude.
cient mechanisme for the control and ordered'development of the information contained in the t r a n s f e r r e d molecules w a s based upon the propertiea
toddy. This r e q u i r e s , of course, that such control mechanisms were alr e a ry inherently present, even in the unicellular organisms.
iVhile we have developed, in the past decade, a m o r e o r l e s s consistent understanding of the nature of information t r a n s f e r on a molec u l a r basis, we a r e only just beginning to understand the way in which
that information manifests itself i n growth. development and differcntiation of c e l l s and t i s s u e s on a molecular basis. This seeme to be a problem
of molecular communication of the nucleus of the cell (the information
storage vault with its environment through the intermediary of the cytoplamic constituents ( s e e F i g u r e
1 7 ).
P e r h a p s the simplest
These m a t e r -
U C R L - 10424
HI
H-o
Water
H-CIN
O=C=O
Carbon
dioxide
Q
It
H-C-OH
H ~ d r m ~ a n i c Formic acid
acid
'?
H-6-H
I
H
I
H
Methane
Hydrogen
N-H
H
H - ~ O HOCH2-C=O
Formaldehyde
Glycolaldehyde
Ammonia
CH3-C-OH
Acetic acid
NH2
Succinic ocid
Glycine
Alanine
""'2
Aspartic acid
MU-16089-A
Figure 3.
Enerev Sources
in Table 1.
TABLE
I-ENERGY
Sowcc of Energy
1)ecay of K4"
in earth's crust a t present
1)ecay of K"' in earth's crust 1.3 x 10" years ago
Decay of I<"' in earth's crust 2.6 x 10" years ago
U!traviolet light of wavelength below 1500 A
Ultraviolet light of wavelength below 2000
L!ltraviolet light of wavelength below 2500 X
I-ight~~i~~g
o r shorter.
o i w a v e l e n g ~ hof
2000
c r u s t , e l e c t r i c d i s c h a r g e s in
of e n e r g y f o r t h e s e t r a n s f o r n a t i o n s as w e l l .
Initial Transformations
The e a r l i e s t etxperimenta designed to t e s t the notions h e r e introduced w e r e done using a high energy alpha particle beam on the cyclotron
solved in water and i r r a d i a t e d in the presence of f e r r o u s iron and hydrogen could produce a variety of reduced carbon compounds, including f o r maldehyde and f o r m i c acid.
Since then s i m i l a r experiments have been performed with other
energy s o u r c e s with the same s t a r t i n g m a t e r i a l s and demonstrating not
only that particles but ultraviolet light
1U
ladn next m a j o r
s t e p was taken
20
Y,10
21
'The i m p o r t a n c e of HCN as a n e a r l y
24,25
--
-- t r a n s f o r m e d into the p r i m i t i v e o r ~ a n i cm o l e c d e s
he formaldehyde
'That such f o u r - , f i v e - , s i x - ,
C =O
LH20H
F;WH
C=O
LHOH
hI-l20H
*
CH20H
I
C=o
~HOH
AHOH
&+OH
A
-7
CH20H
I
C=O
~HOH
~HOH
AHOH
I
C
\
CH20H
-,
I'
K=O
~HOH
AHOH
LHOH
&H$H
I,
F i g u r e 4. Route t o c a r b o h y d r a t e s a s a r e s u l t of t r e a t m e n t of
f o r m a l d e h y d e with l i m e o r l i m e s t o n e .
HC=O
1
CHOH
AHOH
~HOH
AHOH
I
CH20H
21
conditions has been demonstrated and is spectacularly evident in a radioautograph of these products shown in F i g u r e 6.
Most of these d i s c r e t e
.-
45.5%
17.44%
--
21.3%
separation on Dowex 1
and L)owex 50
-
0.45% of total
0.203% of basic fraction
0.03470 of total
0.105~%
of basic fraction
0.01870 of total
2.21% of acid f r a c t m
Lactic acid
0.99% of total
Tlic I?LW urihwwn other dominating acids (not including lactic) accomt ior 2'1%
a ~ ~17.8%,
tl
res11ectively, of the acid fraction.
0.2% of basic fraction
Glycine
0.0370 of total
1.07% of basic fraction
a-Alanine
0.18% of total
0.2%
of basic fraction
Aspartic acid
0.03% of total
U C R L - 10424
F i g u r e 5. N e u t r a l f r a c t i o n of e x p e r i m e n t s M30 a n d M31 i n
c o m p a r i s o n to " f o r m o s e " f r o m f o r m a l d e h y d e and CaO.
Solvent: ethyl a c e t a t e - p y r i d i n e - w a t e r 10:3:3.
UCRL- 10424
F i g u r e 6. R a d i o a u t o g r a p h of c h r o m a t o g r a m of n o n v o l a t i l e
r e s i d u e of e x p e r i m e n t M 2 2 . 2 1
'TaLle 3.
5
Yields in m o l e s (x10 ) f r o m s p a r k i n g a rnixiure or' C H
4'
4'
Gly-;
~,ne
63
Succinic acid
Glycolic acid
56
A s p a r t i c acid
0.4
Glutamic acid
0.6
Yarcosine
Alanine
34
Iminodiacetic acid
5.5
Lactic acid
31
Iminoacecic-propionic acid
1. 5
N -Methylalanine
233
Forrriic acid
4 -Amino-n-butyric a c i d 5
Acetic acid
i5
,A-Aminoisobutyric acid 0 . 1
Propionic a c i d
13
.-A-Hydroxybutyric a c i d
f -Alanine
15
Urea
2.0
N -WJ ethyl u r e a
1.5
produce the s i m p l e o r g a n i c m a t e r i a l s , including m a n y new c a r b o n c a r b o n bonds, f r o m which ;he polymeric m a t e r i a l s m a y t h e m s e l v e s u l t i m a t e l y be d e r i v e d . 'These s i m p l e m a t e r i a l s include amino acids, c a r b o h y d r a t e s , purine-pyrimidine b a s e s , fatty acida, hydroxy a c i d s , a l c o h o l s
a n d the like.
LO
build both
Polymerization
One of the outstanding characteristic a of living organisms has often
been described a s the high degree of organization which they show, and
this particularly in t e r m s of the specific macromolecule^ of which they
a r e constructed. The formation of all of these macromolecules, specified
i n the polymer column of Figure 1, involves the s a m e reaction, namely,
the condensation of two simple molecules with the elimination of water
between them.
It i s clear that a
U C R L - 10424
PROTEINS
NUCLNC
POLYMER
SHOWN - DNA
LACKS
OH
ON
2'
POS/T/ON
y42
POLYMER
F i g u r e 7.
Dehydration r e a c t i o n s leading t o b i o p o l y m e r s .
we
In
recent year@i t
waapatlc dshydrstion raaction in all of t h e m eystmno to produce polym e r s , At firot these roactiono ware c a r r i e d out In nonaqueouer media,
but more recently they have been aucceaeful even in water, and it is the
tsargants which are capable: af doing thia which we muet eeek, since these
are tbe
ðyl ether,
34
Stage)
F i g u r e 8. F o r m a t i o n a n d p o s s i b l e s t r u c t u r e of "polyphosphate
ester. "
7, leading f r o m the purine baee, into rugar, all the way to the polynucleotidse.
24
The p r i m i t i v e o r i g i n o f t h e s e d e h y d r a t i n g a g e n t s i s r e a d i l y u n d e r stood.
Vie h a v e a l r e a d y s e e n t h a t HCN i s o n e o f t h e p r i n c i p a l p r o d u c t s o f
I t i s a l s o w e l l known t h a t any a q u e o u s p h o s p h a t e s o l u t i o n
which i s a l l o w e d t o d r y a t t e m p e r a t u r e s a p p r o a c h i n g 100' C g i v e s r i s e
t o t h e f o r m a t i o n o f a p o l y p h o s p h a t e which i t s e l f i s n o t e x t r e m e l y r a p i d l y
h y d r o l y z e d upon r e d i s s o l v i n g .
I t i s t h i s r e s i : , > ~ . : c ct o i m m e d i a t e h y d r o l y s i s
w i t h w a t e r o f b o t h t h e p y r o p h o s p h a t e and t h e c a r b o n - n i t r o g e n m u l t i p l e
bond which g i v e s r i s e t o t h e i r s p e c i f i c a b i l i t y t o c o u p l e monomers w i t h
t h e absorption o f water.
UCRL- 10424
I1
H2N-CH-C-NH-CH-C02H
I
'?I
R2
-H+
0~9-NH2-F;H-C02H
H2N-C-H
I
R2
In
a,
One
Q% the
H e r e it i s
si
ends is sufficient to overcome the organizing force of the helix, and the
U C R L - 10424
I----------
RI
R2
1
-N-!-c-N-!-c-N-4-c-N-!-CON
I
I
I I I 1111
0
II
I H H O I H H
F i g u r e 13.
R4
R3
0
II
Protein structure.
helix ie destroyed.
pHte below 5, the helix can reform, and these two states a r e reflected
i n a variety of properties, among them the absorption spectrum ( F i g u r e
1 1). 38 When the helix i s formed. the paptide linkages interact with
each other, giving r i s e to decrease of absorbance and splitting into two
bands, which show very clearly in the curve below pH 5.
U C R L - 10424
SIMPSON, 1962
76-
0
*
=-
4-
E
k J
3-
2-
Random Coil
( t = 99.4OCj
SPECTRUM OF NATl VE
CALF THYMUS DNA uno
F i g u r e 12.
H y p e r c h r o m i s m on nucleic acid.
L,L-
*'
f o r the p r o -
a c i d (RNA) r e p l i c a t i o n on a D N A template ( m e s s e n g e r R N A ) .
4L,43
and information
t r a n s f e r s y s t e m s on a m o l e c u l a r level m a y be evolved by a p r o c e s s
U C R L -10424
F i g u r e 13.
M o l e c u l a r d r a w i n g of c o m p o n e n t s of DNA.
U C R L - 10424
c-p\sugar -T
c
sugar -G
\
...H... A - s u y x
\
pl
...H... C- sugar
'P
p\
c sugar -G ...H... c - sugar
\P \
'P
r sugar - A ...H ... T - sugar
'P
'P \
c
sugar - C ...H... G - sugar
\
'P
p\
sugar -C ...H ... G - sugar
>
>
F i g u r e 14. B a s e p a i r i n g f o r DNA r e p l i c a t i o n a n d R N A t e m p l a t e
formation.
Schramm e t
a l . , 1962
...
e n e r g y t r a n s f e r catalytic s y s t e m s .
The question of the r e l a t i o n s h i p between the linear sequences a i
b a s e s i n a nucleic acid and the l i n e a r sequenca of amino acids i n thz
protein, as shown in F i g u r e 16, i s s t i l l with u s .
Ilowever, a g r e a t
14,45,46
A sequence of evsr;:,
ii'
base
- - presumably t h r e e
Group 8 of F i g u r e 17.
a s shown i n
b a s e p a i r i n g of e i t h e r DNA o r RNA.
vv'e a r e only just now beginning to understand the m e c h a n i s m s by
47,48
'The e s s e n t i a l f e a t u r e
U C R L - 10424
PROT E IN
NUCLEIC ACID
A - sugar
\
l
C- sugarp
'P
c - sugar
'P
T- sugar
'P
G - sugar
>
1
1
P'
G -sugar 1
F i g u r e 16.
S t r u c t u r e of p r o t e i n a n d n u c l e i c acid.
U C R L - 10424
r.
CELL
INDUCER
OR
\\
TEMPLATE
RNA
RIBOSOME
11
/o
f--------
PROTEIN,
ENZYME, etc.
RNA
F i g u r e 17.
f i r s t and obvioue external e f f e c t s of what appear to be genetically controlled processes m a y be found. It m a y be that the thalidomids effect
on tho growth and differentiation of human embryos a s well a s the morls
longmtanding problema such o r drug addiction and the long t e r m effects of
imecticidee will ultimate1 y be understood in theae termn.
Here, however, we a r e
However,
F o r example, a eolution
U C R L - 10424
chloride was added to the dilute nvetir arid. TIlrrc long fihrils are
identical i n appearance with thosc of coll;i~enbrlore dirprrsion.
Something r e s e m b l i n g this c r y s t a l l i z a t i o n of s p h z r i c a l v i r u s a s
a p p e a r s to show in the visible s t r u c t u r e s which can be s e e n in :he plant
49
c h l o r o p l a s t e ( F i g u r e 19). H e r e i s a viaible o r d e r e d a r r a y of p a r t i c l e s ,
e a c h about 200 A in: d i a m e t e r .
Whether this s t r u c t u r e c a n be r e c o n s t i -
51
U C R L - 10424
Tobacco
chloroplasts
showing
quantasomes
in
section
Weier,
1962
55
The Cell M e m b r a n e
fi e
biological evolution without saying a few words relating the a a r l i e r p r o c e s s e s to the development of the c e l l u l a r s t r u c t u r e itself. The principal
r e q u i r e m e n t would seem to be s o m e m e c h a n i s m f o r the a p p e a r a n c e of a
c e l l u l a r m e m b r a n e to e n c a s e a l l the biological a p p a r a t u s which w e have
dicscussed, and much m o r e b e s i d e s .
-- f o r example,
In f a c t , if they a r e s p r e a d out e i t h e r a t a
It is interesting to
functionality as well.
57
3;
~ d chave,
UCRL-10424
0. D
EXTRATERRESTRIAL L I F K
It appears to m e that the information we now have available regarding the nature of molecular evolution which leads up to something which i a
unequivocally acceptable todl of us a s a living organism i s such a s to
i m p r e s s one with the notion that such a sequence, a t l e a s t in i t s e a r l i e r
stages, results from the concatenation of molecules and energy sources,
temperature and environment with it8 variation, which the primitive
e a r t h provided, and i t i s not a. unique accident.
The time has simply not been available for this at the rate it
can be done. This i s not t r u e f o r the simple atomic and molecular cc-nbinations of the e a r l i e r phases, the exploration of which took place at a
much higher rate.
59,60
earth.
We,
t h e r e f o r e , cannot s e e
61
A p e r u s a l of
l h i s he has i n t e r p r e t e d to m e a n that
n e a r 3 0 0 c r n - l , c o r r e s p o n d s approximately t o C - W absorption.
Salisbury
63
L i o w e v e r , we zre vzry
uriact.
eobraphy'ol
as wall.
that the white c a p - i s not frozen water a t all but may very well be frozen
N204 instead.
64
the 3.5 u abeorption seems to correspond fairly closely with one of the
NOZ abaorptione, but there i s not enough of it.
65
F u r t h e r than this,
W e are thus left with a high degree of uncertainty about the possible
exietence of carbon-based life on M a r s .
However, w e need not remain in this ignorance for very long.
--
the Moon
will thua be able to have a very close look a t the optical propertiee,
he p o s b i l ~ l e
no^
us of what i t i s made.
a b l y be somewhat longer.
Meteorite Observations
If w e a c c e p t the
Aside f r o m t h e i r in-
However, i t ie only in r e c e n t y e a r s
m i c r o scale and with precision and detail that has allowed new concluviuns
to be drawn a s to their origin.
Some y e a r s ago we examined the organic constituents of one
recently fallen meteorite (Murray, 19 5O), and came to the ccnclueion
that i t not only contained hydrocarbons (at l e a s t up to C12), which were
purely incidental to our search, but also ultraviolet-absorbing m a t e r i a l
which resembled heterocyclic bases going into the construction of nucleic
acids.
67
68
and steroids.
21
69,70
Accepting the c u r r e n t m o s t
73
U C R L - 10424
F i g u r e 22. E l e c t r o n m i c r o g r a p h of ground up p a r t i c l e s f r o m
Orgueil meteorite.
Of c o u r s e , t h e r e will be
7 4 11
r h i s h a s , as yet, been f r u i t l e s s .
Frank Drake
National Redio hatronwy Observatory
Green Dank, West Virginia
REFERENCSS
- 200 (1960).
S. W . Fox, H o w Did Life Begin? Science, 132,
Melvin Calvin, "Chemical ivolution
P r e s s , Eugene, 1961.
, University of Oregon
e,
nii>,ric&,l
P r i v a t e c o m m u n i c a t i o n f r o m E . S. B a r g h o u r n at Woodring C o n f a r
ence on "Major Biologic Innovations a n d the Geologic R e c o r d " ,
June 1961; r e p o r t e d b y P. H. Abelson a n d P. E. Cloud, Jr., P r o c .
Nat. Acad. Sci. 47, 1705 (1961).
N. Getoff, Reduktion d e r K o h l e n s a u r e i n w a s s e r i g e r L o s u n g u n t e r
E i n w e r k u n g von UV-Licht. %. N a t u r f o r s c h . 17b. 87 (1963).
W G G r o t h a n d H. v. rr systienhoff, P h o t o c h a m i c a l 1 o r m a t i o n of
O r g a n i c C o m p o u n d s f r o m M i x t u r e s of S i m p l e G a s e s . P l a n e t . S p a c e
Sci. 2, 79 (1360).
C . P a l m a n d M C d v i n , P r i m o r d i a l Cnrganic C h e m i s t r y . I.
Compounds R s u l t i n g f r o m S l e c t r o n I r r a d i a t i o n of C 14H4.
J. A m . C h e m . 5 o c . 84,
- 2115 (1962).
J. O r o a n d A . P. K i m b a l l , S y n t h e s i s of P u r i n e s und2r P o s s i b l e
P r i m i t i v e E a r t h Conditions. I. S y n t h e s i s of Adenine. A r c h . Bioc h e m . Riophys, 94,
- 217 (1961).
N. H. Horowitz and S. L.
50,
37.
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