Professional Documents
Culture Documents
Drosophila melanogaster
Lily Shearer
Niles North High School
Shearer 1
Table of Contents
Acknowledgements..2
Review of Literature.....4
Materials..10
Procedure.11
Variables.13
Data.....15
Graphs.....19
Discussion............22
Statistical Analysis.......24
Error Analysis..26
Conclusion...27
References....28
Shearer 2
Acknowledgements
I could not have completed this project without the guidance of so many people.
First of all, I would like to thank my teacher and sponsor Mrs. Camel for all of the help
throughout the duration of my project. Thank you for always being so patient with me and for
giving such great comments on every aspect of my project. I would not be here if it was not for
I would also like to extend thanks to the other STEM teachers for all of their help with getting
A special thanks to my classmates for listening as I went through all of my ideas and always
providing moral support when I needed it. I am so lucky to have classmates and friends who are
Finally, I would like to thank my parents for always pushing me to do better and for all of their
Purpose
The purpose of this experiment is to see if anti-inflammatory medication, specifically celecoxib,
-Alzheimers disease is one of the most prevalent diseases in our nation, and it is important to
continue to target the specific causes of this disease and how we can use existing treatments to
Hypothesis
If Drosophila melanogaster that have a mutant in the Amyloid Beta A4 Precursor Protein (APP)
gene and exhibit Alzheimer's symptoms are given celecoxib, an anti-inflammatory medication,
then their Alzheimer's symptoms will be less significant and their memories will function better
in a T-maze.
Rationale
APP is one of the three main genes that cause FAD Alzheimer's. These mutants cause the
buildup of amyloid plaques in the brain due to the A-42 peptides. Mefenamic acid has been
known to prevent the buildup and attenuating the neurotoxicities, and celecoxib has similar
chemical properties to mefenamic acid. If this buildup is prevented, the Alzheimers symptoms
will be less significant and the fruit flies will be able to function better.
Shearer 4
Review of Literature
Alzheimers disease (AD) is the most prevalent form of dementia in the human brain. In
2010, an estimated 36 million people were living with AD. This figure is predicted to increase to
66 million by 2030 (Newman, M., Ebrahimie, E., & Lardelli, M, 2014). The main feature of AD
is progressive memory loss, but symptoms can also include depression, delusions, hallucinations,
and aggressive behavior. Alzheimer's is a very prevalent disease in our society, and although
research is extensive, it is important to look into all possible treatments that have the possibility
of making a difference.
There are two main types of AD, which can classed as familial (FAD), usually which
onsets when the person is under 65 years of age, and sporadic (SAD), which onsets after the
person has turned 65. FAD is often attributed to mutations in three genes, PRESENILIN 1
(PSEN1), PRESENILIN 2(PSEN2), and the AMYLOID BETA A4 PRECURSOR PROTEIN (APP)
(Newman, M., Ebrahimie, E., & Lardelli, M, 2014). The PSEN proteins as well as the APP
proteins comprise -secretase complexes. These complexes are responsible for the cleavage of a
number of single-pass transmembrane proteins such as APP and NOTCH. APP is initially
cleavage of APP by -secretase after -secretase cleavage liberates amyloid- (A) peptides of
various lengths. The longer A-42 peptide is prone to aggregation and is suggested to form toxic
oligomers and fibrils that eventually deposit as amyloid plaques in the brain (Newman, M.,
Ebrahimie, E., & Lardelli, M, 2014). Amyloid plaques consist of a proteinaceous core composed
microglial cells. These amyloid plaques triggers subsequent cellular abnormalities such as
These ultimately lead to neuronal dysfunction, degeneration and death, and have been
hypothesized to be one of the lead causes of FAD Alzheimer's. (Newman, M., Ebrahimie, E., &
Lardelli, M, 2014)
There are 4 drugs currently approved by the FDA to treat AD, and can be classified into
important neurotransmitter for memory, and because it is in short supply in people with AD,
delaying this destruction creates a greater chance of it being passed on to the next nerve cell
(Alzheimer's Association, 2016). However, cholinesterase inhibitors usually only delay the onset
cholinesterase inhibitors (Alzheimer's Association, 2016). Memantine, the fifth Alzheimer's drug,
another important neurotransmitter in the brain involved in learning and memory. The
attachment of glutamate "docking sites" on the cells surface called NMDA receptors allows
calcium to enter the cell. This process is important for cell signaling, as well as learning and
memory (Alzheimers Association, 2016). However, in patients with AD, excess glutamate is
sometimes released from damaged cells, which leads to calcium overexposure and can speed up
cell damage. Memantine assists the prevention of this overexposure by partially blocking the
NMDA receptors (Alzheimer's Association, 2016). The success of these medications varies from
patient to patient, but overall usually only delay the symptoms for 2-5 years (Alzheimer's
Association, 2016).
organism for genetics, microbial pathogenesis, physiology, life history evolution, and more, due
to their short lifespan(40-60 days) and similarities to the human genome (Pitman, J. L., 2009).
Because of the wide knowledge of the fruit fly genome, it has become possible to breed fruit flies
that have mutations in specific genes, including APP (Pitman, J. L., 2009). One of the main
reasons behind the use of fruit flies in Alzheimers research is that the fly has a brain of
approximately 200,000 neurons, and like the vertebrate central nervous system, it is composed of
a series of functionally specialized substructures. The mushroom bodies deal with memory
consolidation and are analogous to the human hippocampus (Moloney, A., Sattelle, D. B.,
Lomas, D. A., & Crowther, D. C, 2010). The neurons of fruit flies are also very similar to those
signatures (Moloney, A., Sattelle, D. B., Lomas, D. A., & Crowther, D. C, 2010). These
functional and structural similarities allow fly models of human disease to be successful on the
biophysical, molecular biological, neurobiological and behavioural levels (Moloney, A., Sattelle,
D. B., Lomas, D. A., & Crowther, D. C, 2010). In a study done in 1990, it was concluded that
flies retrieve memory efficiently when rewarded sugar, and that sugar reinforced memory
One test on NSAIDs and Alzheimers symptoms was done in 1993 that produced positive
placebo (Rogers et al., 1993). Unfortunately, 42% of patients abandoned the study due to adverse
events. Thus, the positive results of this study are of difficult interpretation. A subsequent 1-year
low drop-out rates (7 out of 26 patients on indomethacin and 6 out of 25 patients on placebo).
Unfortunately, the low number of subjects rendered the study inconclusive with non-significant
trends in favor of indomethacin on two cognitive scales at 12months (de Jong et al., 2008).
In a recent study, mice were used as models to test if mefenamic acid could reduce
properties (Daniels, M. J., Rivers-Auty, J., Schilling, T., & Spencer, N. G, 2016). After mice that
were genetically modified to have Alzheimer's symptoms were injected with mefenamic acid,
their symptoms were almost completely gone. It was concluded that mefenamic acid attenuates
Shearer 8
the neurotoxicities induced by the A-42 peptide, or the amyloid plaques, and specifically targets
the NLRP3 inflammasome (Daniels, M. J., Rivers-Auty, J., Schilling, T., & Spencer, N. G,
2016).
have been shown to inhibit IL-1 secretion from macrophages, although the significance of COX
inhibition remains unclear; The fenamate class of NSAIDs inhibit the NLRP3 inflammasome via
reversible blockade of volume-regulated anion channels (VRAC) in the plasma membrane (Dean
L, 2011). Celecoxib is a part of the fenamate class of NSAID. Because of this, it can be
concluded that celecoxib may have enough similar properties to mefenamic acid that would
allow it to also reduce amyloid plaques and/or the negative effects that these plaques cause.
Celecoxib is a nonsteroidal anti-inflammatory drug (NSAID) used to treat mild to moderate pain
(Dean L, 2011).
to treat the pain and inflammation of osteoarthritis, rheumatoid arthritis, ankylosing spondylitis,
acute pain in adults, painful menstruation, and juvenile rheumatoid arthritis (Dean L, 2011).
Celecoxib is compound 22; the 4-sulfamoylphenyl on the 1-pyrazol substituent is required for
COX-2 inhibition and the 4-methyl on the 5-pyrazol system has low hindrance to maximize
in our society that researchers should continue to study to look for a cure. Due to the orthologous
Alzheimer's research on. The drug, mefenamic acid, has properties that allow it to target the
Shearer 9
NPL3 inflammasome and possibly inhibit the buildup of amyloid plaques that cause Alzheimer's,
and due to the similarities of the drug celecoxib to mefenamic acid, celecoxib has the potential to
also prevent AD. Because of the potential of these drugs, experimentation should be completed
Materials
Drosophila melanoxgaster (wild type- not genetic modification) (25-30 specimen)
Celecoxib
Freezer
Sucrose
Balance
Tap Water
10 mL Beakers (2-4)
Disposable Pipettes
Stirring Rod
Scoopula
Graduated Cylinder
Ruler
Masking Tape
Procedure
Preparing Habitats
1. Obtain Formula 4-24 Drosophila Plain Medium and twelve culture tubes. Add
approximately 4 grams of dry media and approximately 10 mL of water to the bottom of
each culture tube.
2. Make sure to add enough water to the media flakes until an accurate solid consistency is
reached. The six culture tubes should be filled of the way with the media food source.
3. Using a mortar and pestle, break the celecoxib pills apart until they reach a fine powder.
4. Add 0.15 grams of celecoxib to three of the culture tubes. Add .30 grams of celecoxib to
another three of the culture tubes. Make sure the tubes are labeled with low
concentration and high concentration.
5. Place approximately 25 genetically normal flies in three of the vials. Label these
control.
6. Place approximately 25 APP modified fruit flies in each of the tubes that were given
celecoxib as well as 25 APP modified flies in the remaining three tubes.
7. Place all twelve labeled tubes in a stable, dry area. Make sure to plug the tops of the tubes
with foam sponges to prevent escape.
8. After one week, if necessary, transfer flies into new vials with fresh medium; render the
flies unconscious by placing each tube on a horizontal slant inside a freezer for
approximately 1-2 minutes. Take the tubes out and lay them down on their side. While
the fruit flies are unconscious, transfer all the specimen into their newly assigned tube.
Transfer the fruit flies by holding the frozen tube at a slant and slowly pouring the
unconscious specimen into the newly prepared tube also held at a slant. After the transfer
is complete, immediately cap the new tubes to prevent escape and place them on a
horizontal slant.
Training Flies
1. After a few days, begin to train the fruit flies to recognize the odor.
2. Place four drops of odor one on a foam sponge. Place in the vial and leave for 2 minutes.
Shearer 12
3. Immediately after, place another sponge and 1.25 grams of sugar in vial. Leave for 5
minutes.
4. Repeat step two for all tubes for two to three days.
5. Place four drops of odor two on a foam sponge. Place in the vial and leave for 3 minutes.
Immediately after, place a fresh, new sponge in vial.
T Maze Testing
1. Connect three plastic tubes together in a T formation according to box, with the ends of
the T having two additional tubes that have the sponge toppers. Place a sponge topper
with four drops odor 1 on the left side and a sponge topper with four drops of odor 2 on
the right side.
2. Anesthetize flies (according to step 8 above) and then place in the edge of the T maze.
Close the edge with a foam stopper.
3. Once flies have picked a side, remove the left tube, place 1.25 grams of sugar in, and
leave for 5 minutes. Anesthetize flies and return to previous tube.
4. Remove right tube, anesthetize flies, and return to previous tube.
5. Repeat testing for each vial for 4 days.
Disposal
1. Once testing is complete, euthanize flies by placing in the freezer for 15 minutes. Place
flies in a plastic bag and throw in garbage.
2. Dispose of the old food medium sources by rinsing the culture tubes with water and soap.
3. Wash out the tubes and any equipment used to touch the fruit fly specimen during the
duration of the experiment.
Shearer 13
Variables
Independent Variable: The independent variables in this experiment are the amount of
celecoxib that the fruit flies are exposed to. The amounts of 0.15 grams and 0.30 grams were
used for this experiment. The differing amounts of celecoxib have the possibility to change the
memory functioning of the fruit flies, and therefore are the independent variables.
Dependent Variable: The dependent variable is the number of fruit flies that choose odor 1,
which is the odor that had previously led them to sugar. This will be translated into percentages.
This is the dependent variable because the amount of flies that choose the first odor have the
possibility to change if they are given the celecoxib. The memory functioning of the fruit flies is
the dependent variable because it can possibly be changed by the amount of celecoxib that it is
exposed to.
Control Groups: The control groups are the group of flies that do not have a genetic mutation as
well as the group of fruit flies that have the mutation but are not given the celecoxib. These are
the controls because they demonstrates the response of no fruit flies to the drugs as well as how
fruit flies that have a mutation in APP perform in the T Maze. These are the controls because
they will not be affected by the celecoxib.
Constants:
- Environment of flies: food given each day, water, space in vial, temperature, light source,
etc.
- Amount of time flies are anesthetized for
- Materials used to gather results
These things were kept constant to prevent experimental error. By keeping the only variable that
changes the amount of celecoxib they were exposed to, the results would be more focused on
how the drug affects the memories of the fruit flies, instead of how these other variables affect
the memory functioning.
Shearer 14
Data
Average
Control Percent
Day 1 61.32897603
Day 2 60.69893423
Day 3 62.3973521
Day 4 63.64522417
Shearer 19
Graphs
Shearer 20
Shearer 21
Discussion
When looking at this data, it is clear that on a day to day basis and on average, the fruit
flies that had the APP mutation and were exposed to the celecoxib chose the positive odor(the
one that led to sucrose) more frequently than the flies with the APP mutation who were not
exposed to the celecoxib. The fruit flies that had the genetic mutation but were not given
celecoxib typically chose the positive odor 45-55 percent of the time, while the fruit flies given
0.15 grams of celecoxib chose the positive odor around 50-55 percent of the time and the fruit
flies given 0.30 grams of celecoxib chose the positive odor around 55-60 percent of the time. The
control group (the flies with no genetic mutation) chose the positive odor 60-65 percent of the
time. It is obvious that the group given a higher concentration of celecoxib had a greater
improved memory ability than the group with given a lower concentration, meaning that greater
amounts of celecoxib did cause a greater improvement in the memory functioning in the fruit
flies. This demonstrates that the celecoxib did help reverse some of the Alzheimers symptoms
that were present in the flies with the mutation because the fruit flies were choosing the odor that
they remembered having sugar, a positive result, with that odor. However, both groups were still
significantly lower than the control group, showing that the drug did not completely repair the
It is also possible to see if the memories of the fruit flies continued to progress each day
when looking at the slope of the best fit line on the scatter graph. When the slope is positive, it
means that more and more flies are choosing the positive odor each test. This can be attributed to
the fact that they are continually being trained by receiving the sucrose, and so they will continue
to pick the sucrose and more flies will choose the left side, but it can also be attributed to the fact
Shearer 23
that their memories are continuing to improve because of the drug. Because the slope of the APP
mutation control group is negative, it can be concluded that the fruit flies memory is continuing
to deteriorate each day. The groups given the drug as well as the control group improved on
average each day (given the positive slope), which demonstrates that the celecoxib is making a
difference in the memory ability of the fruit fly because it is not behaving the same as the group
with no drug, and it is also showing that the fruit flies were able to register the positive results
The results of the APP mutated flies fluctuated up and down more than the results of the
control group as well as the groups that were given the celecoxib. This demonstrates a greater
severity of Alzheimers symptoms in the fruit flies because they are behaving and choosing
which odor more sporadically. Because the groups given the celecoxib did not fluctuate as much,
Shearer 24
Statistical Analysis
Null hypothesis: The average percentage of fruit flies given no celecoxib that chose the odor
with a positive result is equal to the average percentage of fruit flies that were given celecoxib
and chose the odor with a positive result.
Alternative Hypothesis: The average percentage of fruit flies given no celecoxib that chose the
odor with a positive result is equal to the average percentage of fruit flies that were given
celecoxib and chose the odor with a positive result.
Because p<.05, this data is statistically significant and the null hypothesis is rejected in favor of
the alternative hypothesis.
Alternative Hypothesis: The average percentage of fruit flies given no celecoxib that chose the
odor with a positive result is equal to the average percentage of fruit flies that were given
celecoxib and chose the odor with a positive result.
p=.000305
Because p<.05, this data is statistically significant and the null hypothesis is rejected in favor of
the alternative hypothesis.
When performing statistical analysis, the results of the experimental groups were
compared with the results of the group with the APP mutation, but that were not given the
medication. For the group with the low concentration of celecoxib, the t value was calculated to
be 2.38361, and the p was calculated to be 0.03627. For the group with the higher concentration
of celecoxib, the t value was calculated to be 5.177818, and the p was calculated to be .000305.
Because the p value for both groups is less than 0.05, the null hypothesis is rejected in favor of
the alternative hypothesis, which means that the data is statistically significant.
Shearer 26
Error Analysis
There were many opportunities for experimental error when conducting this experiment.
One major example of experimental error is the fact that by working with living organisms, each
one is not identical and therefore has differences in their body structure and nervous system. I
attempted to rule out this error by using as many fruit flies as possible, but more fruit flies and
more data for my next attempt would be a good way to try and limit experimental error.
There is also the fact that because of the relatively short lifespan of fruit flies, the number
of fruit flies fluctuated on a day to day basis because some of them died at the same time that
many of them were reproducing. This creates a source of error because the fruit flies that were
being produced were not trained in the same way that the original flies were. This makes it so
that they will have more sporadic results. This was also attempted to be corrected by doing the
tests on a day to day basis so fewer of them had the chance to die or reproduce. The number of
flies also slightly fluctuated because a few of them would not move when put in the T-maze, and
this error was attempted to be corrected by tapping on the plastic in order to try and coax the fly
into choosing a side. This was not always successful, and in the future, I will attempt to build a
maze where the flies are limited in space and must choose a side.
Another possibility for experimental error is human error; even though exact
measurements were attempted for each step, there is always the possibility that something was
not measured correctly or was inserted incorrectly.I attempted to make as precise measurements
as possible to try and prevent this experimental error. To really combat the possibility of error,
Conclusion
My hypothesis was supported by these results. These results showed that fruit flies with
an APP mutation had a more sporadic pattern when choosing the odor, while flies that had this
mutation but were given celecoxib tended to choose the odor that related to sucrose, which was
more similar to the control (the group with no mutation). This demonstrates that the celecoxib
caused the fruit flies to regain memory function, most likely by targeting the NLRP3
inflammasome and preventing the buildup of amyloid plaques. This data was also proven
statistically significant, showing that there is a real correlation between celecoxib and memory
functioning. While these findings did show that celecoxib did reduce AD symptoms, there is still
quite a bit of experimentation that should be done on how NSAIDs affect Alzheimers disease.
This project was on a much smaller scale, and while there are many similarities to
genetics and memory functioning of fruit flies and humans, there is still a long way to go before
this will be carried into an effective treatment for humans. Because Alzheimers is such a
devastating disease and has become so prevalent in our world, it is important to continue to look
at ways to treat it, and it is also important to look at existing medication and treatments to see
References
Daniels, M. J., Rivers-Auty, J., Schilling, T., & Spencer, N. G. (2016, August 11). Fenamate
NSAIDs inhibit the NLRP3 inflammasome and protect against Alzheimers disease in
rodent models. In Nature Communications. Retrieved September 8, 2016, from
http://www.nature.com/ncomms/2016/160811/ncomms12504/full/ncomms12504.html
De Jong, D., Jansen, R., Hoefnagels, W., Jellesma-Eggenkamp, M., Verbeek, M., Borm, G., &
Kremer, B.
(2008). No Effect of One-Year Treatment with Indomethacin on Alzheimers Disease
Progression: A Randomized Controlled Trial. PLoS ONE, 3(1), e1475.
http://doi.org/10.1371/journal.pone.0001475
Dean L. (2011) Comparing NSAIDs. In: Dean L. PubMed Clinical Q&A [Internet]. Bethesda
(MD): National Center for Biotechnology Information (US); 2008-2013. Available from:
http://www.ncbi.nlm.nih.gov/books/NBK45590/
Imbimbo, B. P., Solfrizzi, V., & Panza, F. (2010). Are NSAIDs Useful to Treat Alzheimers
Disease or Mild
Cognitive Impairment? Frontiers in Aging Neuroscience, 2, 19.
http://doi.org/10.3389/fnagi.2010.00019
Levin ED, Cerutti DT. (2009) Behavioral Neuroscience of Zebrafish. In: Buccafusco JJ, editor.
Methods of Behavior Analysis in Neuroscience. 2nd edition. Boca Raton (FL): CRC
Press/Taylor & Francis; 2009. Chapter 15. Available from:
http://www.ncbi.nlm.nih.gov/books/NBK5216/
Meinertzhagen I. A., Hanson T. E. (1993). The development of the optic lobe, in The
Development of Drosophila Melanogaster, ed. Martinez-Arias M. B. A. A., editor.
(New York, NY: Cold Spring Harbor Press; ), 13631491.
Moloney A., Sattelle D. B., Lomas D. A., Crowther D. C. (2010). Alzheimers disease:
insights
from Drosophila melanogaster models. Trends Biochem. Sci. 35, 228235.
10.1016/j.tibs.2009.11.004
Newman, M., Ebrahimie, E., & Lardelli, M. (2014). Using the zebrafish model for Alzheimers
disease research. Frontiers in Genetics, 5, 189. http://doi.org/10.3389/fgene.2014.00189
Pitman, J. L., DasGupta, S., Krashes, M. J., Leung, B., Perrat, P. N., & Waddell, S. (2009). There
are many ways to train a fly. Fly, 3(1), 3.
Shearer 29
Rogers J., Kirby L. C., Hempelman S. R., Berry D. L., Mcgeer P. L., Kaszniak A. W., Zalinski
J.,
Cofield M., Mansukhani L., Willson P., Kogan F. (1993). Clinical trial of indomethacin
in Alzheimer's disease. Neurology 43, 16091611
Poeck B., Strauss R., Kretzschmar D. (2012). Analysis of amyloid precursor protein function
in Drosophila melanogaster. Exp. Brain Res. 217, 413421.
10.1007/s00221-011-2860-3