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Three chitinases, designated pineapple leaf chitinase by degrading chitin, a major component of the cell walls
(PL Chi)-A, -B, and -C were puried from the leaves of of many fungi,2,3) but researchers poorly understand
pineapple (Ananas comosus) using chitin anity column what characters of chitinases have high antifungal
chromatography followed by several column chroma- activity.4) In this study, we attempted to determine both
tographies. PL Chi-A is a class III chitinase having a the biochemical characters and the antifungal abilities of
molecular mass of 25 kDa and an isoelectric point of 4.4. chitinases derived from a tropical plant, and we discuss
PL Chi-B and -C are class I chitinases having molecular the relationship.
masses of 33 kDa and 39 kDa and isoelectric points of Tropical plants are exposed to many stresses such as
7.9 and 4.6 respectively. PL Chi-C is a glycoprotein and ultraviolet rays, high temperatures, and osmotic stresses.
the others are simple proteins. The optimum pHs of PR (pathogenesis-related) proteins containing chitinase
PL Chi-A, -B, and -C toward glycolchitin are pH 3, 4, are induced not only by pathogenesis but also by these
and 9 respectively. The chitin-binding ability of PL Chi- stresses.3,58) Therefore, it is to be expected that
C is higher than that of PL Chi-B, and PL Chi-A has chitinases derived from tropical plant are expressed in
lower chitin-binding ability than the others. At low ionic large quantities and/or exhibit unique characters as
strength, PL Chi-B exhibits strong antifungal activity compared to those derived from other plants. We
toward Trichoderma viride but the others do not. At high screened various tropical plants for chitinase activity.
ionic strength, PL Chi-B and -C exhibit strong and Pineapple (Ananas comosus) showed high chitinase
weak antifungal activity respectively. PL Chi-A does not activity relative to the other tropical plants assayed.
have antifungal activity. Considering that pineapple is a CAM (Crassulacean acid
metabolism) plant9) adapted to strong light and dry
Key words: chitinase; chitin-binding protein; pineapple; climate, it is to be expected that the chitinases derived
Ananas comosus; antifungal activity from leaves of pineapple exhibit unique characters.
In this paper, we describe the purication, biochem-
There are several types of chitinase in plants. On the ical characterization, and antifungal activity of three
basis of their amino acid sequences, plant chitinases chitinases from the leaves of pineapple.
have been classied into four classes: class I chitinases
consisting of an N-terminal chitin-binding domain and a Materials and Methods
catalytic domain, class II chitinases with only a catalytic
domain homologous to that of class I chitinases, Materials. Pineapples (Ananas comosus) were har-
class III chitinases sharing no homology with class I vested at Nago Agricultural experiment station. Chitin
or class II chitinases, and class IV chitinases sharing and chitin beads were purchased from Seikagaku and
homology with class I chitinases but smaller due to four New England BioLabs respectively. All other reagents
deletions.13) Even in the same class, there are various were of analytical grade.
isoforms which have low homology and/or a dierent
isoelectric point. Why do various structures of chitinase Preparation of crude chitinase. Pineapple leaves
exist in plants? Chitinases having dierent structures (500 g) were homogenized with 2,500 ml of deionized
should play dierent roles or the same roles in dierent water and then left for 4 h at 4 C. After centrifugation,
manners. Their biochemical characters, depending on the supernatant was saturated with ammonium sulfate
their structures, are expected to relate to their physio- and the precipitate produced was collected. The precip-
logical roles. One of the physiological roles of plant itate was resolved with 10 mM TrisHCl buer (pH 7.5)
chitinases is to protect plants against fungal pathogens and the solution was put on a Sephadex G-25 column
y
To whom correspondence should be addressed. Fax: +81-98-895-8802; E-mail: tokey@agr.u-ryukyu.ac.jp
Abbreviations: PL Chi, pineapple leaf chitinase; CAM, Crassulacean acid metabolism; RSC, rye seed chitinase; PAGE, polyacrylamide gel
electrophoresis; CBB, Coomassie brilliant blue; PAS, periodic acid Schi; PDA, potato dextrose broth with agar
190 T. T AIRA et al.
(12 44 cm) previously washed with the same buer, SDSPAGE in the presence of 2-mercaptoethanl using a
and developed with the same buer. The fraction that MW-marker Kit (Apro Science).
contained chitinase activity was collected as crude
chitinase. Isoelectric point. The isoelectric point of chitinase
was measured using electrofocusing on a 5% polyacryl-
Protein measurement. Absorbance was measured at amide gel slab containing a 2% carrier ampholyte of
280 nm to monitor the proteins during chromatographic pH 3.510.0 (Sigma), as described by Vesterberg.14)
separation. Protein concentration was measured by the Proteins on the gel were stained with Coomassie
bicinchoninic acid method10) using bovine serum albu- brilliant blue R-250. The isoelectric point was deter-
min as the standard. mined using an IEF-marker Kit (Sigma).
Assay of chitinase activity. Chitinase activity was N-terminal amino acid sequence analysis. N-terminal
assayed colorimetrically using glycolchitin or chitin amino acid sequence analysis was done by Edman
beads. Ten ml of the sample solution was added to 250 ml degradation with a protein sequencer (Applied Biosys-
of 0.2% (w/v) glycolchitin or 1% (w/v) chitin beads in tems, Model 473A).
0.1 M buer. After incubation at 37 C for 15 min, the
reducing power of the reaction mixture was measured Eects of pH and temperature on activity and
using ferri-ferrocyanide reagent by the method of Imoto stability. The optimum pH of the chitinases was
and Yagishita.11) The chitinase activity of each fraction measured after incubation with glycolchitin in the buer
in the chromatography was expressed by the absorbance at various pHs (112) at 37 C for 15 min. The pH and
of the reaction mixture at 420 nm (A420). One unit of thermal stabilities of the enzymes were measured from
enzyme activity was dened as the amount of enzyme the residual activities after incubation in the buer at
releasing 1 mmol of GlcNAc per min at 37 C. various pHs at 37 C for 24 h and in 0.1 M sodium
phosphate buer, pH 7.0, at various temperatures for
Chitin anity column chromatography. The crude 1 h, respectively. The residual activities of PL Chi-A,
chitinase was put on a chitin column (3:0 30 cm) -B, and -C were measured at pH 3.0, 4.0, and 9.0
previously equilibrated with 10 mM TrisHCl buer, respectively. The buers used were: 0.1 M HCl (pH 1),
pH 7.5. After washing out the unadsorbed protein with glycineHCl buer (pH 23), sodium acetate buer
the same buer, the adsorbed protein was eluted with (pH 45), sodium phosphate buer (pH 67), TrisHCl
1 M NaCl in the same buer. Then still adsorbed protein buer (pH 89), and glycineNaOH buer (pH 1013).
was eluted with 0.5 M acetic acid.
Chitin-binding assay. The chitin-binding ability of the
Ion-exchange column chromatography. Resource Q chitinase was examined using a chitin column (0:7
and SP-Sepharose HP column chromatographies were 2:5 cm), as described by Yamagami et al.15) Twenty-ve
done by putting the proteins in 10 mM sodium acetate mg of the chitinase was dissolved in 10 mM sodium
buer, pH 5.0, on 1:6 3 cm and 0:5 5 cm columns phosphate buer, pH 7.0, and put on a chitin column
respectively and then eluting the adsorbed proteins with previously equilibrated with the same buer. After
a liner gradient of NaCl from 0 to 0.2 M in the same washing unadsorbed protein with the same buer, the
buer. chitin-binding protein was eluted rst with 1 M NaCl in
the same buer, second with 0.1 M acetic acid, and third
Hydrophobic column chromatography. Butyl-Toyo- with 1 M acetic acid solution.
pearl 650M was done by putting the proteins in 1.5 M
ammonium sulfate-20 mM TrisHCl buer, pH 7.5, on a HPLC analysis of the hydrolysis products of
1:5 16 cm column. Then the adsorbed proteins were (GlcNAc)n by chitinases. The hydrolysis products of
eluted with a linear gradient of ammonium sulfate from (GlcNAc)n by chitinases were analyzed by HPLC on a
1.5 to 0 M in the same buer. Phenyl superose column Tosoh TSK-Gel amide-80 column (0:46 25 cm) using
chromatography was done by putting the proteins in the method of Koga et al.16) The reaction mixture,
0.75 M ammonium sulfate-20 mM TrisHCl buer, consisting of 10 pmol of chitinase and 10 nmol of
pH 7.5 on 0:5 5 cm, and then the adsorbed proteins (GlcNAc)n in 100 ml of 4 mM buer after incubation
were eluted with a linear gradient of ammonium sulfate for 30 minutes at 25 C, was immediately cooled in an
from 0.75 to 0 M in the same buer. ice bath, and a 5 ml potion was applied onto the column.
Elution of the hydrolysis products was done with 70%
SDSpolyacrylamide gel electrophoresis. SDSPAGE acetonitrile at a ow rate of 0.7 ml/min.
was done by the method of Laemmli12) using a 15%
acrylamide gel. Proteins on the gel were stained with Antifungal assay.17) An agar disk (6 mm in diameter)
Coomassie brilliant blue R-250. Carbohydrates on the with the fungus Trichoderma viride, which was derived
gel were detected using periodic acid Schi staining from the fungus in an actively growing state previously
(PAS staining).13) The molecular mass was measured by cultured on a potato dextrose broth with 1.5% (w/v)
Characterization of Pineapple Leaf Chitinases 191
Results
Fig. 3. Comparison of the N-Terminal Amino Acid Sequences of Pineapple Leaf Chitinases and PL Chi-B Fragment with Those of Other Plant
Chitinases and Hevein.
Identical residues are shown in white with a black background. a, plant class III chitinase from rubber tree;18) b, plant class I chitinase from
rye seeds;19) c, chitin-binding peptide from rubber tree;20) d, plant class II chitinase from rye seeds.21) <Q indicates pyroglutamate residue.
X indicates unidentied residue.
Discussion
lower than that of TobH (Tob without the chitin- sequences encoding a cysteine-rich domain. Plant Mol.
binding domain).24) Arakane et al. showed that the Biol., 14, 357368 (1990).
fusion proteins, consisting of the catalytic domain of 2) Collinge, D. B., Kragh, K. M., Mikkelsen, J. D., Nielsen,
Manduca sexta chitinase and one or two insect or plant K. K., Rasmussen, U., and Vad, K., Plant chitinases.
Plant J., 3, 3140 (1993).
chitin-binding domains linked by its part of the linker
3) Graham, L. S., and Stickelen, M. B., Plant chitinases.
region, had high binding ability and lower Vmax toward
Can. J. Bot., 72, 10571083 (1994).
colloidal chitin than the proteins, consisting of the 4) Theis, T., and Stahl, U., Antifungal proteins: targets,
catalytic domain and a part of the linker.25) The high mechanisms and prospective applications. Cell. Mol. Life
chitin-binding ability of chitinases perhaps retards their Sci., 61, 437455 (2004).
turnover rates. 5) Neuhaus, J. M., Plant chitinases (PR-3, PR-4, PR-8,
PL Chi-Bf consists of the catalytic domain and a part PR-11). In Pathogenesis-Related Proteins in Plants,
of the linker region but lacks the chitin-binding domain eds. Datta, S. K., and Muthukrishnan, S., CRC Press,
of PL Chi-B. PL Chi-Bf showed antifungal activity to a Bokca Raton, pp. 77105 (1999).
similar extent with PL Chi-B in the absence of NaCl, but 6) Brederode, F. T., Linthorst, H. J. M., and Bol, J. F.,
the antifungal activity of PL Chi-Bf decreased with Dierential induction of acquired resistance and PR
gene expression in tobacco by virus infection, ethephon
increasing NaCl concentration in the culture medium as
treatment, UV light and wounding. Plant Mol. Biol., 17,
opposed to that of PL Chi-B (Fig. 7). PL Chi-C did not
11171125 (1991).
exhibit antifungal activity in the absence of NaCl. In the 7) Metraux, J. P., and Boller, T., Local and systemic
presence of NaCl, however, PL Chi-C exhibited weakly induction of chitinase in cucumber plants in response to
antifungal activity, and the activity increased with viral, bacterial, and fungal infections. Physiol. Mol.
increasing NaCl concentration. Previously we suggested Plant Pathol., 28, 161169 (1986).
that basic class I chitinase binds to fungal hypha by 8) Tateishi, Y., Umemura, Y., and Esaka, M., A basic
ionic interaction of the catalytic domain and by hydro- class I chitinase expression in winged bean is up-
phobic interaction of the chitin-binding domain.17,26) regulated by osmotic stress. Biosci. Biotechnol. Bio-
The results in this study support our previous suggestion, chem., 65, 16631668 (2001).
since higher salt concentrations might decrease ionic 9) Cushman, J. C., Crassulacean acid metabolism: a plastic
photosynthetic adaptation to arid environments. Plant
interaction and increase hydrophobic interaction. Con-
Physiol., 127, 14391448 (2001).
sidering that the pineapple is a CAM plant adapted to 10) Smith, P. K., Krohn, R. I., Hermanson, G. T., Mallia, A.
strong light and a dry climate, the ionic strength of the K., Gartner, F. H., Provenzano, M. D., Fujimoto, E. K.,
tissues of pineapple can be high, depending on the Goeke, N. M., Olson, B. J., and Klenk, D. C., Measure-
environment. PL Chi-C is abundant in the leaves of ment of protein using bicinchoninic acid. Anal. Bio-
pineapple and might play a defense role against chem., 150, 7685 (1985).
pathogenic fungi under high ionic strength conditions. 11) Imoto, T., and Yagishita, K., A simple activity measure-
PL Chi-A was most abundant in the leaves of pine- ment of lysozyme. Agric. Biol. Chem., 33, 11541156
apple and had the highest chitinolytic activity toward (1971).
soluble chitin among pineapple leaf chitinases, but did 12) Laemmli, U. K., Cleavage of structural proteins during
not exhibit antifungal activity. The cleavage pattern of the assembly of the head of bacteriophage T4. Nature,
227, 680685 (1970).
N-acetylchitooligosaccharides by PL Chi-A is dierent
13) Zacharius, R. M., Zell, T. E., Morrison, J. H., and
from those by PL Chi-B and -C. PL Chi-A might Woodlock, J. J., Glycoprotein staining following electro-
indirectly aect the invasion of pathogens, as by elicitor phoresis on acrylamide gels. Anal. Biochem., 30, 148
producing, or may have other functions. To estimate the 152 (1969).
physiological roles of these chitinases in the pineapple 14) Vesterberg, O., Isoelectric focusing of proteins in
plant, their expression patterns and localization will be polyacrylamide gels. Biochim. Biophys. Acta, 257, 11
discussed in our subsequent papers. 19 (1972).
15) Yamagami, T., and Funatsu, G., Limited proteolysis and
Acknowledgments reduction-carboxymethylation of rye seed chitinase-a:
role of the chitin-binding domain in its chitinase action.
We thank M. Takeuchi (Nago Branch, Okinawa Biosci. Biotechnol. Biochem., 60, 10811086 (1996).
16) Koga, D., Yoshioka, T., and Arakane, Y., HPLC analysis
Prefectural Agricultural Experiment Station) for supply-
of anomeric formation and cleavage pattern by chitino-
ing pineapple leaves. This project was supported by lytic enzyme. Biosci. Biotechnol. Biochem., 62, 1643
grants from the Urma Trust Fund for Research into 1646 (1998).
Science and Humanity. 17) Taira, T., Ohnuma, T., Yamagami, T., Aso, Y., Ishiguro,
M., and Ishihara, M., Antifungal activity of rye (Secale
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