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http://doi.org/10.5281/zenodo.556751
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INTRODUCTION:
Hypertension has become a leading cause of human Angiotensin Converting Enzyme (ACE) [4] is an
morbidity and mortality. According to World enzyme that converts Angiotensin I to Angiotensin
Health Organization [1], about 40% of people aged II [4]. Angiotensin II is a potent vasoconstrictor
25 and above are suffering from hypertension and is implicated in the development of
worldwide. According to recent studies [2, 3], the hypertension. Therefore, drugs that prevent the
burden of hypertension is increasing at an alarming generation of Angiotensin II from Angiotensin I by
rate in Gulf region including in the Kingdom of inhibiting the Angiotensin Converting Enzyme
Saudi Arabia. These studies have also stated that if (ACE) as well as the drugs that are Angiotensin II
the burden of hypertension remains uncontrolled, it receptor antagonists are in clinical use as
will lead to major challenges to the health care antihypertensive agents, for example, captopril [5],
system. Accordingly, efforts should be made to enalapril [6], lisinopril [7], telmisartan [8],
reduce the burden of hypertension worldwide. candesartan [9], and azilsartan [10].
O OH O OH O OH
O O O
O O
NH N NH N
N
HS O CH3 HO
H3C
CH3
Captopril
NH2
Enalapril Lisinopril
HO O
N O OH
N N
N N
N N
N O H
N CH3
CH3 N CH3
CH3
Candesartan
Telmisartan
HO O
N NH
N
O
O
O
N CH3
Azilsartan
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However, many side effects are also associated MOPAC (semiempirical quantum mechanics) with
with these drugs, for example, proteinurea, rashes, the AM1 mozyme geometry, 100 iterations and
bad mouth odor, arrhythmia, allergic reactions, minimum RMS gradient of 0.10. For each ligand,
pancreatitis, alopecia, angioedema, and corresponding ATOM/HETATM and CONECT
gastrointestinal disorders. Therefore, scientists are records were extracted from protein complex in the
working to develop new ACE inhibitors as well as pdb file. After assigning bond orders, missing
Angiotensine II receptor antagonists that are safer hydrogen atoms were added. Then in the AutoDock
and effective than these existing drugs. tools package, the partial atomic charges were
Benzimidazole derivatives are reported to possess calculated using Gasteiger-Marsili method [20] and
diverse biological activities [11,12]. Benzimidazole after merging non-polar hydrogens, rotatable bonds
derivatives have also been reviewed as were assigned. For receptor, the ligand, as well as
antihypertensive agents including as inhibitors of any additional chains and all the heteroatoms
the Angiotensin Converting Enzyme (ACE) [13- including water molecules were removed. By the
15]. Therefore, it was aimed to perform molecular use of AutoDock Tools all missing hydrogens were
modelling studies and to synthesize some added. Input molecule files for an AutoDock
benzimidazole derivatives as angiotensin experiments must conform to the set of atom types
converting enzyme inhibitors. supported by it. Therefore, pdbqt format was used
to write ligands, recognized by AutoDock. The grid
MATERIALS AND METHODS: maps were calculated using AutoGrid [21]. In all
Molecular Docking Methodology dockings, a grid map with 60 x 60 x 60 points, a
Docking studies were carried out by using grid spacing of 0.503 A were used, and the maps
AutoDock Vina software [16], running on Linux were centered on the ligand binding site. All the
Ubuntu 12.0, installed on Pentium i3 workstation. compounds taken under study were modeled by
The program AutoDock Tools (ADT) released as an positioning them in the LPR (PDB ID: 1O86)
extension suite to the Python Molecular Viewer binding site in the active domain of ACE protein as
was used to prepare the protein and the ligand to accorded by the published crystal structure. From
convert the molecules into Autodock type, which is the comparative docking study of our compounds
a prerequisite for the docking [17, 18]. Discovery with standard binding compound (LPR) we could
studio 4 [19] was used for visualizing the observe how our compounds might bind to the
resolutions of docked conformations. ChemDraw ACE inhibition site, based on the knowledge of the
ultra 8.0 software [Chemical Structure Drawing structure of similar active sites. We redocked LPR
Standard; Cambridge Soft corporation, USA into the active site of the protein and then we
(2003)] was used for construction of compounds docked with our compounds in order to compare
which were transformed to 3D structures using the binding affinity of both ligand and the test
Chem 3D ultra 8.0 software and the constructed 3D compounds. The docking score of the targeted
structures were energetically minimized by using compounds is also provided in Table 1.
Table 1: Docking scores of the selected compounds and the physical constants of the synthesized
compounds
CH3
O N
H3C
S
N
O
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CH3
O NH2 O N O N
H3C CS 2 / KOH CH 3 CH 2 CH 2 CH 2 Br H3C
SH S CH3
Ethanol NaOH / Ethanol
NH2 N N
H H
2-(butylsulfanyl)-5-methoxy-1H-benzimidazole
O
Br NaOH / Ethanol
R
Scheme 1
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were determined by linear regression calculator of lisinopril exhibited binding affinity of -8.3 kcal/mol
GraphPad software. with the ACE protein and interacted with the Glu-
162, Asn-277, Asn-281, His-383 and Tyr-523 by
forming conventional H-bond as shown in 2D-
RESULTS: diagram of ligand protein interaction (Figure 1).
Molecular Docking Study Interestingly, compounds 10 (Figure 2), 16 (Figure
The docking data of Lisinopril with the ACE 3), and 17 (Figure 4) also showed binding affinity
protein revealed that the original co-crystallized close to Lisinopril. The compound 10 exhibited
and docked ligand overlapped with ACE protein binding affinity of -8.3 kcal/mol; the compound 16
elegantly, thereby validating our docking study. exhibited binding affinity of -8.2 kcal/mol; and the
The results of docking scores in terms of binding compound 17 exhibited binding affinity of -8.3
affinity have been summarized in Table 1. The kcal/mol.
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Table 2: Pharmacokinetic Properties important for good oral bioavailability for the promising
compounds
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Cmpd Reproductive
Tumorigenic Mutagenic Irritation Vol TPSA Solubility DS
No. Effect
10 332 44.13 -4.53 0.47
Colour of circle indicates level of toxicity; Green: low, Yellow: medium, Red: Highly toxic.
TPSA, topological polar surface area; DS, Drug score.
The data of the Table 3 revealed that the selected bromide in the presence of sodium hydroxide to
compounds 10, 16, and 17 were safe with respect to provide 2-(butylsulfanyl)-5-methoxy-1H-
Tumorogenecity, Irritation and reproductive effect. benzimidazole.. The 2-(butylsulfanyl)-5-methoxy-
1H-benzimidazole was treated with 2-
Drug Likeness can be defined as balance of various fluorophenacylbromide, 2-methylphenacylbromide,
molecular properties and structure features which and 2-nitrophenacylbromide to obtain the targeted
determine whether particular molecule is similar to compounds 10, 16 and 17, respectively. The
the known drugs. Aptness of drug likeness can be structure of the compound 17 was confirmed on the
judged by matching the graph of drug like basis of following data.
compounds as shown in Figure 5. The compound
17 further showed good level of drug likeness 2-[2-(butylsulfanyl)-5-methoxy-1H-
prediction. benzimidazol-1-yl]-1-(2-nitrophenyl)ethanone
(17): IR (KBr) cm-1: 2950, 1685 (C=O), 1335,
Chemistry 1390; 1H-NMR (DMSO-d6, ppm): 0.88 (t, 3H),
The benzimidazole derivatives were prepared 1.31-1.44 (m, 2H), 1.60-1.72 (m, 2H), 3.21 (t, 2H),
according to the method provided in Scheme 1. The 3.88 (s, 3H), 5.97 (s, 2H), 7.15-7.41- (m, 3H), 7.53-
compound 5-methoxy-1H-benzimidazole-2-thiol 7.84 (m, 4H); 13C-NMR (DMSO-d6, ppm): 12.8,
was reacted with carbon disulfide in the presence of 14.4, 21.6, 32.4, 36.4, 55.1, 55.8, 110.5, 112.1,
potassium hydroxide to obtain 5-methoxy-1H- 121.8, 126.5 (2C), 133.0, 133.7, 134.4, 138.9,
benzimidazole-2-thiol. The 5-methoxy-1H- 143.7, 151.6, 155.1, 163.1.
benzimidazole-2-thiol was treated with butyl
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O N
H3C
S CH3
N
NO 2
Compound 17
Table 4: In vitro ACE inhibitory activity of Compound 17 and the standard drug lisinopril
Compound Concentration %ACE Inhibition IC50 Docking
(g/mL) (Mean SD) (g/mL) Score
1 42.10 0.10*
2 59.99 0.13* 0.86 -8.3
Lisinopril 4 75.16 0.16*
8 87.11 0.18*
1 41.98 0.19*
Compound 17 2 60.12 0.18*
4 74.70 0.22* 0.81 -8.3
8 85.06 0.35*
*p < 0.0001; n = 3.
ACE inhibitory Assay HO_DCO_WHD_2013.2_eng.pdf?ua=1; Accessed
Based on the molecular modelling results, In silico on March 15, 2017.
toxcicity data, and the drug likeliness prediction, 2.Charbel EB, Ziad AM, Marwa T, Farah D,
the compound 17 was selected for further in vitro Margaret R, Sara J, Sarah M, Mohammad AS,
ACE inhibitory assay using Dojindo ACE Kit- Mohammad AA, Ali HM, Abdullah AA.
WST test kit, Dojindo Laboratories, Kumamoto, Hypertension and its associated risk factors in the
Japan. The ACE inhibitory activity data of these Kingdom of Saudi Arabia, 2013: A National
compounds are provided in Table 4. Survey. Inter. J. Hypertens, 2014, Article
ID 564679, 8 pages
DISCUSSION: http://dx.doi.org/10.1155/2014/564679.
The compound 17 was identified as an equipotent 3.Najlaa A, Faruk A. Prevalence of cardiovascular
ACE inhibitor with respect to standard drug disease and associated risk factors among adult
lisinopril having a docking score of -8.3. The In population in the Gulf region: A systematic review.
Silico toxicity studies revealed that this compound Adv. Public Health. 2015, Article ID 235101, 23
was safe with respect to its tumorogenecity, pages http://dx.doi.org/10.1155/2015/235101.
irritation effect, and reproductive effect. The 4.Naik P, Murumkar P, Giridhar R, Yadav MR.
application of the Lipinskis Rule of 5 and drug Angiotensin II receptor type 1 (AT1) selective
likeliness studies also revealed that this compound nonpeptidic antagonists - A perspective. Bioorg.
has an acceptable level of drug likeliness property Med. Chem. 2010; 18:8418-8456.
with a potential to become a good orally active 5.Furqan M, Mahmood A, Aysha R. Synthesis and
candidate. The in vitro ACE inhibitory assay of this in vitro characterization of hydroxypropyl
compound also revealed that it was almost methylcellulose-graft-poly (acrylic acid/2-
equipotent with respect to standard drug lisinopril. acrylamido-2-methyl-1-propanesulfonic acid)
polymeric network for controlled release of
CONCLUSION: captopril. Acta Pol. Pharm. 2016; 73(1):183-196.
It is evident from the results that the compound 17 6.Loscertales HR, Modamio P, Lastra CF, Braza
has required attributes to become a potential AJ, Tobaruela G, Mario EL. Stability of enalapril
candidate as an ACE inhibitor. However, further repackaged into monitored dosage system. Curr.
studies are recommended to ensure its efficacy and Med. Res. Opin. 2015; 31(10): 1915-1917.
safety in different animal models. 7.Bouabdallah S, Ben Dhia MT, Driss MR. Study
of a conformational equilibrium of lisinopril by
REFERENCES: HPLC, NMR, and DFT. Int. J. Anal. Chem. 2014;
1.World Health Organization, 2013. A global brief Article ID 494719.
on hypertension [ONLINE] Available at:
http://apps.who.int/iris/bitstream/10665/79059/1/W
935
www.iajps.com Page 935
IAJPS 2017, 4 (04), 926- 936 Mohd. Imran et al ISSN 2349-7750
8.Rizos CV, Elisaf MS. Telmisartan: a multifaceted benzimidazole-based medicinal chemistry. Chem.
antihypertension drug. Curr. Med. Res. Opin. 2016; Bio. Drug Des. 2015; 86(1):19-65.
15:1-2. 16.Natesh R, Schwager SL, Sturrock ED, Acharya
9.Kang MK, Chung WB, Hong SK, Kim OR, Ihm KR. Crystal structure of the human angiotensin-
SH, Chang K, Seung K. Effects of candesartan converting enzyme-lisinopril complex.
cilexetil and amlodipine orotate on receptor for Nature. 2003; 421(6922):551-554.
advanced glycation end products expression in the 17.Trott O, Olson AJ. AutoDock Vina: improving
aortic wall of Otsuka Long-Evans Tokushima Fatty the speed and accuracy of docking with a new
(OETFF) type 2 diabetic rats. Arch. Pharm. Res. scoring function, efficient optimization and
2016; 39(4):565-576. multithreading. J. Comput. Chem. 2010; 31:455-
10.Angeloni E. Azilsartan medoxomil in the 461.
management of hypertension: an evidence-based 18.Michel FS. Python: A Programming Language
review of its place in therapy. Core Evid. 2016; for Software Integration and Development. J. Mol.
11:1-10. Graphics Mod. 1999; 17:57-61.
11.Yogita B, Om S. The therapeutic journey of 19.Dassault Systems BIOVIA, Discovery Studio
benzimidazoles: A review. Bioorg. Med. Chem. Modeling Environment, San Diego: Dassault
2012; 20:62086236. Systmes, 2016.
12.Monika G, Chander M. Development of drugs 20.Gasteiger J, Marsili M, Iterative partial
based on imidazole and benzimidazole bioactive equalization of orbital electronegativitya rapid
heterocycles: recent advances and future directions. access to atomic charges. Tetrahedron. 1980;
Med. Chem. Res. 2016; 25:173-210. 36:3219-3228.
13.Geeta Y, Swastika G. Structure activity 21.Goodford PJ. A computational procedure for
relationship (SAR) study of benzimidazole scaffold determining energetically favorable binding sites
for different biological activities: A mini-review. on biologically important macromolecules. J Med
Eur. J. Med. Chem. 2015; 97:419-443. Chem. 1985; 28:849857.
14.Kuldipsinh PB, Stoyanka N, Illiyan I, 22.Imran M, Nayeem N. Synthesis and
Manjunath DG. Novel research strategies of Antihypertensive Activity of Some Novel
benzimidazole derivatives: A review. Mini-Rev. Pyridazinones. Orient J Chem. 2016; 32(1):267-
Med. Chem. 2013; 13(10):1421-1447. 274.
15.Rangappa SK, Asha H, Srinivasa B, Bhari MN.
Comprehensive review in current developments of
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