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Letters in Applied Microbiology 1990, 11, 158-162 MFS/Q32

Detection of Listeria species and Listeria monocytogenes using


polymerase chain reaction

P . M . B O R D E RJ,. J . H O W A R D *G, . S . PLASTOW


& K . W . SICGENS
Dalgety PLC,
Group Research Laboratory, Station Road, Cambridge C B l 2 J N , U K

Received 1 June 1990 and accepted 7 June 1990

BORDER,P.M., HOWARD,J.J., PLASTOW, G.S. & S I G G E N SK.W.


, 1990.
Detection of Listeria species and Listeria monocytogenes using polymerase chain
reaction. Letters in Applied Microbiology 11, 158-162.
Five oligonucleotide sequences are described that were used as primers in the poly-
merase chain reaction (PCR) to amplify specific sequences from Listeria DNA.
When all five primers were used in combination, three PCR products were possible;
a Listeria specific product that occurs with DNA from any Listeria sp., a Listeria
monocytogenes specific product that occurs only in the presence of DNA from this
organism and a universal product that is found using DNA from any bacterial
source. The occurrence of these PCR products was used as a diagnostic test on
bacteria isolated from various food samples to detect Listeria sp. and L. mono-
cytogenes.

The detection of the human pathogen Listeria Curiale 1988). One of the main disadvantages of
monocytogenes and other members of the genus the methods published to date is that relatively
Listeria in food products by existing methods is large numbers of target cells need to be present
a time-consuming procedure, largely because of (typically 104-105) in order to yield unam-
the need to isolate pure cultures before further biguous results in a background containing
characterization may be undertaken. Recent large numbers of non-target micro-organisms
developments in molecular biology have raised (Wernars & Notermans 1990).
the possibility of detecting pathogens in foods The recently developed technique of poly-
and other samples without the need for iso- merase chain reaction (PCR) using thermostable
lation of pure cultures using target-specific gene DNA polymerase (Saiki et al. 1988) permits the
probes (see Walker & Dougan 1989; Wernars & rapid amplification of specific DNA sequences
Notermans 1990 for recent reviews). by a factor of up to 10. Polymerase chain
Approaches to the detection of Listeria sp. by reaction methods have been described that will
such methods have used standard hybridization detect low levels of Escherichia coli in clinical
techniques either to detect genes coding for samples (Olive 1989), Pseudomonas cepacia in
factors thought to be involved in pathogenicity soil samples (Steffan & Atlas 1988), Mycohac-
such as a-haemolysin (Datta et al. 1987, 1988), terium leprae in armadillo tissues (Hartskeerl et
listeriolysin 0 (Mengaud et al. 1988), msp al. 1989) and Aeromonas salmonicida in fish
(major secreted polypeptide of L. mono- (Barry et al. 1990). The sensitivity of these
cytoyenes, Flamm et al. 1989) and L. mono- systems typically approximates to the detection
cytogenes DTH factor (Notermans et al. 1989) of a single bacterium. To the authors know-
or to detect specific 16s ribosomal RNA (rRNA) ledge there have been no published reports of
sequences (Klinger et al. 1988; Stackenbrandt & DNA amplification using PCR to detect Listeria
sp. in food or other samples. The work reported
* Corresponding author. in this paper describes the use of a number of
Detection of Listeria using PCR 159
synthetic oligonucleotide probes as primers in maintained on Tryptose Agar (Difco) and all
the PCR to amplify DNA sequences from L. other strains were maintained on Nutrient Agar
monocytogenes and other Listeria sp. (Oxoid). Putative Listeria strains were isolated
from a variety of sources using the method of
Materials and Methods Maclean & Lee (1988).

BACTERIAL STRAINS P R E P A R A T I O N OF S A M P L E S F O R P C R

The bacterial strains used in this study are DNA from bacteria listed in Table 1 was
detailed in Table 1. All Listeria strains were extracted by the method of Heath et al. (1986).
Putative Listeria strains isolated from various
Table 1. Origin and identity of bacterial strains used sources were used as crude cell lysates in the
Bacterium Source/reference PCR. Lysates were obtained by resuspending
cells in 50 pl of water and heating at 110C for 5
Listeria
grayi NCTC 10815 min.
innocua NCTC 11288
ivanovii NCTC 11846 S Y N T H E S I S OF O L I G O N U C L E O T I D E P R I M E R S
monacyt ogenes NCTC 10357
monorytogenes NCTC 11994 Oligonucleotide primers were synthesized in the
murrayi NCTC 10812 Biochemistry Department, University of Leices-
seeliyeri NCTC 11856 ter on an Applied Biosystems 380B synthesizer
welshimeri NCTC 11857
Jonesia denitrijicans NCTC 10816 using standard protocols. All reagents were sup-
Aeramonas hydrophila NCTC 8049 plied by Cruachem, Scotland. Sequences of the
Bacillus cereus NCTC 11143 oligonucleotide primers used in this study are
Brochothrix thermosphacta NCTC 10822 shown in Table 2.
Erwinia curotovora SCRI 193
Escherichia coli K12 Laboratory strain
NM522 D N A AMPLIFICATION BY PCR
Gemella haemolysans NCTC 10243
Klebsiella pneumoniae ATCC 15050 Polymerase chain reaction was performed on
Lactobacillus DNA extracts or crude cell lysates essentially as
amylophilus NCIMB 11546 described by Saiki et al. (1988). Reactions were
helveticus NCIMB 8652 carried out in a final volume of 50 pl, containing
p 1antarum NCIMB 11974
Salmonella typhimurium NCIMB 10248 5 pl 10 x PCR buffer (100 mmol/l Tris pH 8.3,
Serratia marcescens NCIMB 2303 500 mmol/l KCI, 15 mmol/l MgCI,, 0.1%
Staphylococcus aureus NCIMB 9518 gelatin; all reagents from Sigma), 5 p1 dNTP
Enterococcus faecalis ATCC 8043 mix (2 mmol/l each of dGTP, dTTP, dATP and
Lactococcus lactis
subsp. lactis NCIMB 6681
dCTP from Pharmacia Ultrapure dNTP set), 3
Veillunellu criceti ATCC 8043 pl each appropriate primer (0.1 mg/ml), 0.5 pl
Yersinia enterocolitica NCTC 11174 AmpliTaq DNA polymerase (Perkin Elmer
NCTC, National Collection of Type Cultures; Cetus) plus 1 pl of appropriate DNA prep-
NCIMB, National Collection of Industrial and aration or crude cell lysate. Tubes were overlaid
Marine Bacteria; SCRI, Scottish Crops Research with paraffin oil prior to thermal cycling.
Institute; ATCC, American Type Culture Collection. Thermal cycling was carried out using a Perkin

Table 2. Sequences of oligonucleotide primers


Derived from Sequence
Primer + or - strand (5'-3') Reference
u1 + CAGCMGCCGCGGTAATWC Lane et al. (1985)
u2 - CCGTCAATTCMTTTRAGTTT Lane et al. (1985)
LI1 - CTCCATAAAGGTGACCCT Stackenbrandt &
Curiale (1988)
LM 1 + CCTAAGACGCCAATCGAA Mengaud et al. (1988)
LM2 - AAGCGCTTGCAACTGCTC Mengaud et al. (1988)
M denotes A or C; W denotes A or T; R denotes A or G.
160 P . M . Border et al.
Elmer Cetus DNA Thermal Cycler. Denatur- based on 16s rRNA sequences that are essen-
ation, annealing and extension temperatures tially conserved throughout all bacteria (Lane et
were 95", 50" and 72C respectively. Denatur- al. 1985). Hence these primers are universal and
ation temperature was maintained for 4 min on should yield a product of 408 bp derived from
the first cycle and for 1 min for the subsequent the 16s rRNA genes that are present in genomic
29 cycles. Annealing and extension times were DNA from any bacterial source. Reference to
maintained at 2 s and 1 min respectively Fig. 1 shows that a PCR product of 408 bp was
throughout the entire 30 cycles. After 30 cycles observed for each of the 26 bacterial species
an additional extension period of 8 min was used in this study.
maintained. Tubes were then held at 4C until The LI1 primer was also based on 16s rRNA
the PCR products were analysed. Analysis of sequence data (Stackenbrandt & Curiale 1988).
PCR products was by horizontal agarose gel When used in conjunction with the U1 primer,
electrophoresis using 1.5% agarose (SeaKem the LI1 primer should yield a PCR product of
ME) gels run in Tris (50 mmol/l Sigma), borate 938 bp. The LI1 primer was designed to be spe-
(50 mmol/l Sigma), EDTA (2.5 mmol/l BDH) cific to members of the genus Listeria as its
buffer containing 0.1 mg/ml ethidium bromide. sequence is complementary to a 16s rRNA
Gels were visualized and photographed under sequence that is highly conserved in all Listeria
U.V. light on a UVP inc. transilluminator. sp. so far studied but variable in other bacteria
(Stackenbrandt & Curiale 1988). Figure 1 shows
that the LI1 probe is specific to Listeria sp. since
Results and Discussion only these samples show the characteristic band
at 938 bp. In contrast, none of the other bac-
Figure 1 shows the PCR products obtained terial species tested showed this band amongst
when total genomic DNA from various bacteria their PCR products. As expected Jonesia deni-
was subjected to PCR using a combination of trijicans, formerly called Listeria denitrijicans
all five primers described in Table 2. The bac- until its re-classification (Rocourt et al. 1987),
teria were selected to include the type strains of does not show a band corresponding to the
all known Listeria sp. plus a wide variety of LIl/Ul product at 938 bp.
other bacterial species including some that are The LM1 and LM2 primers are based on
phylogenetically closely related to Listeria (e.g. sequence data of the listeriolysin 0 gene
Brochothrix thermosphacta, Bacillus cereus). published by Mengaud et al. (1988), and are
The primer sequences were designed to have dif- hence designed to be specific to those bacteria
ferent specificities. The U1 and U2 primers were that carry this gene. The results in Fig. 1 show

Fig. 1. Products obtained when genomic DNA from various bacteria were subjected to PCR using a combination
of U1, U2, LI1, LM1 and LM2 primers. Lanes 1 and 28, Hae 111 digested pUC 9 standards (587 bp, 458/434 bp
and 298 bp); lane 2, Listeria grayi; lane 3, L. innocua; lane 4, L. iuanouii; lane 5, L. monocytogenes NCTC 10357;
lane 6, L. monocytogenes NCTC 11994; lane 7, L. murrayi; lane 8, L. seeligeri; lane 9, L. welshimeri; lane 10,
Jonesia denitrijicans; lane 11, Aeromonas hydrophila; lane 12, Bacillus cereus; lane 13, Erochothrix thermosphacta;
lane 14, Erwinia carotovora; lane 15, Escherichia coli; lane 16, Gemella haemolysans; lane 17, Klebsiella pneumon-
iue; lane 18, Lactobacillus amylophilus; lane 19, Lact. helueticus; lane 20, Lact. plantarum; lane 21, Sulmonella
typhimurium; lane 22, Serratia marcescens; lane 23, Staphylococcus aureus; lane 24, Enterococcus faecalis; lane 25,
Lactococcus lactis subsp. luctis; lane 26, Veillonella criceti; lane 27, Yersinza enterocolitica.
Detection of Listeria using P C R 161
that the two L. monocytogenes strains tested LIl/U1 band to 938 bp (Fig. 2, lanes 3, 5, 14, 16,
were the only bacteria that exhibited the charac- 17, 23 and 30) indicating the presence of Listeria
teristic LMi/LM2 product at 702 bp. This DNA in the cell lysate. One isolate (Fig. 2, lane
finding suggests that the listeriolysin 0 gene may 2) also showed the characteristic LMl/LM2
be unique to L. monocytogenes and that the product at 702 bp indicating the presence of L.
LMI/LM2 primer combination is therefore spe- monocytogenes in the original sample. Sub-
cific to this organism. sequent biochemical tests confirmed the results
Figure 2 shows the PCR products obtained predicted by the PCR method. The results pre-
when various cell lysates from bacteria isolated sented in this paper suggest that it may be pos-
from a number of sources were subjected to sible to devise a rapid method for the detection
PCR using a combination of all five primers of Listeria sp. in foods and other products based
shown in Table 2. Cell lysates prepared from on the PCR. The primer sequences described
cultures of L. innocua (Fig. 2, lanes 8, 9 and 10) permit the detection of all members of the genus
and L. monocytogenes (Fig. 2, NCTC 11994, Listeria so far investigated, as well as the spe-
lanes 11, 12 and 13 and NCTC 10357, lane 18) cific detection of L. monocytogenes. We have
were also included in this experiment. All iso- demonstrated that the method works not only
lates tested showed the characteristic U1/U2 on bacterial DNA extracts but also on crude
PCR product at 408 bp, clearly demonstrating cell lysates which may be rapidly prepared from
the usefulness of this primer combination as a culture plates. Although no attempt has been
positive control for the efficiency of the PCR. made to determine the detection limits of the
The cell lysates prepared from known Listeria system, the sensitivity of PCR-based methods is
sp. gave the same PCR products as the corre- such that it may prove possible to develop the
sponding DNA extracts in the first experiment method into one that will detect Listeria sp. and
(Fig. 1). In addition to this, several of the L. monocytogenes directly in enrichment broths.
unknown isolates showed the characteristic Such a method would have obvious advantages

Fig. 2. Products obtained when crude cell lysates prepared from bacteria isolated from a variety of food samples
were subjected to PCR using a combination of U1, U2, LI1, LM1 and LM2 primers. Lanes 1, 20,21 and 32, Hae
I11 digested pUC 9 standard (587 bp, 458/434 bp, 298 bp, 267 bp, 257 bp and 174 bp); lanes 2 , 4 , 5 , 6 , 7 and 17,
unknown colonies isolated from wheat; lane 3, unknown colony isolated from cream; lanes 8, 9 and 10, colonies
of Listeriu innorua; lanes 1 I, 12 and 13, colonies of L. monocytogenes NCTC 11994; lanes 14, 15 and 16, unknown
colonies isolated from potatoes; lane 18, colony of L. rnonocytogenes NCTC 10357; lane 19, unknown colony
isolated from cucumber; lanes 22, 23, 26 and 27, unknown colonies isolated from lettuce; lanes 24, 30 and 31,
unknown colonies isolated from mushrooms;lanes 25,28 and 29, unknown colonies isolated from radish.
162 P. M . Border et al.
over existing methods used for the detection of MCCLEAN,D. & LEE, W.H. 1988 Development of
Listeria in foods. USDA/FSIS method for the isolation of Listeria
rnonocytogenes from raw meat and poultry. Journal
of the Association of Analytical Chemistry 71, 660-
The authors would like to thank John Keyte of 664.
the University of Leicester, Department of Bio- MENGAUD, J., VICENTE, M.F., CHENEVERT, J., PEREIRA,
chemistry, for synthesizing the oligonucleotides J.M., GEOFFREY, C., GICQUEL-SANZEY, B., BAQUERO,
F., PEREZ-DIAZ,J.C.& COSART, P. 1988 Expres-
used in this work. sion in Escherichia coli and sequence analysis of the
listeriolysin 0 determinant of Listeria mono-
cytogenes. Infection and Immunity 56, 766772.
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