Package Description

Install Required Software

Obtain Code
Configure
Compile Model

RegCM 4.3 training session I

Installing RegCM4.3rc

G. Giuliani
International Centre for Theorethical Physics - Trieste
Earth System Physics Section

ICTP - Earth System Physics Section

May 7, 2012
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ICTP - ESP Install RegCM4.3rc

 Package Description
Install Required Software
Obtain Code
Configure
Compile Model

Description

The model is distributed as Fortran90 source code.

A compiler is needed to transform to executable.
I GNU GNU fortran compiler

I intel Intel
R
ifort fortran compiler
I pgi Portland R
pgf90 fortran compiler
I g95 g95 fortran compiler

Check which one is present on system. 1

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1
Side by side install? Consider Modules package
ICTP - ESP Install RegCM4.3rc
 Package Description
Install Required Software
Obtain Code
Configure
Compile Model

Requirements
The model needs at least two libraries:
I netCDF netCDF Library

nc-config --version
I MPI MPI Library
ompi_info --version ompi release
We have an environment for the workshop:
bash
source /home/netapp-clima/users/ggiulian/workshop_env.sh

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ICTP - ESP Install RegCM4.3rc

 Package Description
Install Required Software
Obtain Code
Configure
Compile Model

GPL license primer

The usual way to install a package on Linux is to compile the
software. The Free Software distributed with GPL license
empowers the user giving
I the freedom to use the software for any reason
I the freedom to study how it works
I the freedom to modify it to fit any personal need
I the freedom to develop any product depending on it
I the limit to contribute modifications to the original
software developer
I the limit to distribute any derived work with the same
license again as source code ictp-logo

ICTP - ESP Install RegCM4.3rc

 Package Description
Install Required Software
Obtain Code
Configure
Compile Model

Software Install on Linux

The normal steps to install software relies usually on GNU

autotools
I Download source package as compressed archive
I Unpack it on disk
I Configure software build
I Translate source code in machine executable
I Install software either on system or user path
I Modify environment to use the software

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ICTP - ESP Install RegCM4.3rc

 Package Description
Install Required Software
Obtain Code
Configure
Compile Model

RegCM4.3rc home
The RegCM4.3rc package is distributed by the Gforge site
http://gforge.ictp.it/gf/project/regcm

I Files section on the left sidebar

I Package RegCM4.3rc click on the tar.gz file
Download packed release file, unpack on local disk:
cd Downloads
mv RegCM-4.3-rc1.tar.gz /scratch/$USER
cd /scratch/$USER
tar zxvf RegCM-4.3-rc1.tar.gz
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ICTP - ESP Install RegCM4.3rc

 Package Description
Install Required Software
Obtain Code
Configure
Compile Model

Configure RegCM4.3rc builder

First, we need to check the workshop environment:
gfortran --version
cd RegCM-4.3-rc1
Let the configure script do some work for you.
./configure CC=gcc FC=gfortran

I Find the required software listed above in 3

I Set up the correct flag for the compiler
I Add or remove from compilation part of the code
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ICTP - ESP Install RegCM4.3rc

 Package Description
Install Required Software
Obtain Code
Configure
Compile Model

Make the executable

How to make what executables?

make install

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ICTP - ESP Install RegCM4.3rc

 Package Description
Install Required Software
Obtain Code
Configure
Compile Model

Whats happened?

ls Bin

aerosol GrADSNcPlot icbc regcmMPI sigma2p terrain

average GrADSNcPrepare chem_icbc clm2rcm regrid sst

Now we can start play around with the model.

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ICTP - ESP Install RegCM4.3rc

 Package Description
Install Required Software
Obtain Code
Configure
Compile Model

Run Environment

We setup a run environment and start the setup

cd /scratch/$USER
mkdir -p run/{input,output}
cd run
ln -sf /scratch/$USER/RegCM-4.3-rc1/Bin .
cp /scratch/$USER/RegCM-4.3-rc1/Testing/test_001.in .
gedit test_001.in

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ICTP - ESP Install RegCM4.3rc

 Package Description
Install Required Software
Obtain Code
Configure
Compile Model

Running the model

./Bin/terrain test_001.in
./Bin/sst test_001.in
./Bin/icbc test_001.in
mpirun -np 2 ./Bin/regcmMPI test_001.in
We can now go to step 2, analize the output.

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ICTP - ESP Install RegCM4.3rc