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Industrial Crops and Products xxx (2015) xxx–xxx

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Industrial Crops and Products


journal homepage: www.elsevier.com/locate/indcrop

Isolation and identification of an antibacterial compound from


Diplotaxis harra (Forssk.) Boiss
Roudaina Benzekri a,∗ , Lamjed Bouslama a , Adele Papetti b , Mejdi Snoussi c ,
Imen Benslimene a , Majdi Hamami a , Ferid Limam a
a
Laboratory of Bioactive Substances, Center of Biotechnology of Borj Cedria, BP 901, Hammam Lif 2050, Tunisia
b
Nutraceutical & Food Chemical—Toxicological Analysis Laboratory, Department of Drug Sciences, University of Pavia, Viale Taramelli 12, 27100 Pavia, Italy
c
Laboratory of Wastewater Treatment, Water Researches and Technologies Center of Borj Cedria, BP 901, Hammam Lif 2050, Tunisia

a r t i c l e i n f o a b s t r a c t

Article history: The emergence of the antibiotic resistance is an ongoing problem in public health, and therefore the
Received 9 July 2015 search for new natural molecules represents an alternative to synthetic drugs. The aim of this study
Received in revised form 30 October 2015 was to test the antibacterial activity of ten Mediterranean plants (Diplotaxis harra, Ecballium elaterium,
Accepted 23 November 2015
Pergularia tomentosa, Myrtus communis, Solanum villosum, Solanum sodomaeum, Peganum harmala, Lepid-
Available online xxx
ium sativum, Pistacia lentiscus, and Calendula arvensis) against seven pathogenic bacteria (Staphylococcus
aureus, Escherichia coli, Listeria monocytogenes, Pseudomonas aeruginosa, Klebsiella sp., Salmonella enter-
Keywords:
itidis, and Bacillus cereus) using the disk diffusion method, in order to isolate and identify the active
Antibacterial activity
Diplotaxis harra
compound(s). Dichloromethane extract of D. harra flower showed the best activity against S. aureus
Food-borne pathogen and L. monocytogenes (MIQ = 30 ␮g/disk and 15 ␮g/disk, respectively). This extract was submitted to a
Sulforaphane bio-guided purification using Thin Layer Chromatography (TLC)-bioautography, and an antibacterial frac-
TLC-bioautography tion (MIQ = 2 ␮g/disk) was isolated. The active fraction was characterized by RP-HPLC-DAD-ESI-MSn and
GC–MS GC–MS. Sulforaphane, an isothiocyanate known for its anti-cancer, antioxidant, and anti-inflammatory
HPLC-DAD-ESI-MSn properties, was identified as antibacterial agent in D. harra for the first time. Due to its high antibacterial
activity, sulforaphane could be considered a good candidate for the selection of new natural antibacterial
molecules.
© 2015 Elsevier B.V. All rights reserved.

1. Introduction compounds), natural products constitute the best reservoir of new


antibiotics. However, despite the idea that the use of traditional
The overuse of antibiotics and the emergence of the antimicro- medicine has no scientific argument and that only few among the
bial resistance require the search for new alternative compounds many plants in the World have been investigated, the search for
active against pathogenic microorganisms resistant to the avail- new compounds coming from medicinal plants remains a hope for
able antibacterial drugs. Herbal medicine plants have traditionally the discovery of new drugs in the treatment of infectious diseases.
been used as remedies for human diseases. As they produce a large In Mediterranean area many plants have been studied for their
variety of secondary metabolites (alkaloids, flavonoids, terpenoids, biological activities. For example, the seeds of Diplotaxis harra
steroids, saponins, glycosides, phenolic compounds, and sulphur are rich in glucosinolates acting as plant defense against pests
and are responsible for the bitter and pungent flavor of many
foods such as mustard, radishes, cauliflowers, broccolis (D’Antuono
et al., 2007). The fruit of Ecballium elaterium contains cucurbitacin,
Abbreviations: ATCC, American Type Culture Collection; CIP, Collection of Pas-
teur’s Institute; GC–MS, gas chromatography mass spectrometry; HPLC-DAD-ESI- a poisonous substance irritating to skin; its juice is a purgative
MS, high-performance liquid chromatography-diode array detector-electrospray used for the treatment of sinusitis (Attard and Sciluna-Spiteri,
ionization-mass spectrometry; LB, Luria–Bertani; MH, Mueller Hinton Agar; MIQ, 2001). The roots of Pergularia tomentosa contain cardenolide gly-
minimal inhibitory quantity; MTT, methyl thiazolyl tetrazolium chloride; MS, cosides exhibiting cytotoxic activity due to their potent inhibition
mother solution; TLC, Thin-Layer Chromatography.
∗ Corresponding author. Fax: + 216 79 325 638. of Na+/K + -ATPase (Piacente et al., 2009). The essential oil of Myr-
E-mail address: benzekri.roudayna@gmail.com (R. Benzekri). tus communis contains bio-active substances such as alpha-pinene,

http://dx.doi.org/10.1016/j.indcrop.2015.11.059
0926-6690/© 2015 Elsevier B.V. All rights reserved.

Please cite this article in press as: Benzekri, R., et al., Isolation and identification of an antibacterial compound from Diplotaxis harra
(Forssk.) Boiss. Ind. Crops Prod. (2015), http://dx.doi.org/10.1016/j.indcrop.2015.11.059
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cineole and myrtenol, known for their antiseptic and expecto- 2.3. Plant extracts
rant properties (Bouzabata et al., 2015). Solanum villosum subsp.
villosum exhibit an anti-parasitic effect (against Fasciola hepat- The different parts of each plant were freeze dried using Alpha
ica) (Hammami and Ayadi, 2008), and an anti-mosquito larvicidal 1-2 LD Freeze Dryer apparatus (Christ, UK), and ground in a blender
activity (against Aedes aegypti, the Dengue and Yellow fever vector) Retsch GM200 (Grintomix) until obtaining a fine powder. Five grams
(Chowdhury et al., 2008), whereas no specific action was men- of each dried plant were extracted by maceration using 50 ml of
tioned for Solanum sodomaeum . The seeds of Peganum harmala solvents of increasing polarity, i.e. hexane, dichloromethane, ethyl
contain psychotropic alkaloids (harmine, harmol, and harmaline) acetate, and methanol, under agitation for 24 h at room tempera-
classified as narcotic substances, and acting as neurotransmitter ture. The extracts obtained with each solvent were filtered and then
mediated by opioid receptors (Farouk et al., 2008). The seeds of Lep- evaporated to dryness under vacuum in a rotary-evaporation unit
idium sativum have been shown to reduce asthma symptoms and (Vacuum controller V-850, Buchi, Switzerland). Each dried extract
improve lung function in asthmatics (Archana and Anita, 2006). was dissolved in the respective extraction solvent, obtaining a final
Pistacia lentiscus is efficient against Helicobacter pylori through concentration of 50 mg/ml (mother solution, MS), and stored at
resin (mastic gum) secreted by the tree which has the ability to −20 ◦ C until the assays. The plant extraction procedure was car-
heal peptic ulcers by killing these bacteria (Marone et al., 2001). ried out in triplicate. Overall, 132 plant extracts were obtained for
For Calendula arvensis, one report demonstrated that petroleum each procedure.
ether and chloroform extracts exhibited antibacterial effect against
Escherichia coli and Bacillus subtilis (Abu Hena Mostofa Jamal et al., 2.4. Bacterial strains
2014).
The objective of the present work was to screen for new natural Seven bacterial strains were used through-out this study: S.
antibacterial agents. Ten plants widely spread in the Mediter- aureus ATCC 25,923, E. coli ATCC 25,922, L. monocytogenes ATCC
ranean area [D. harra (Forssk.) Boiss. (Brassicaceae), Ecballium 19,195, Pseudomonas aeruginosa ATCC 27,853, Klebsiella sp. CIP
elaterium (L.) A. Rich. (Cucurbitaceae), P. tomentosa L. (Apocy- 104,727, Salmonella enteritidis ATCC DMB560, B. cereus ATCC
naceae), M. communis L. (Myrtaceae), S. villosum Mill. subsp. villosum 14,759.
(Solanaceae), Solanum sodomeaum Dunal (Solanaceae), Peganum
harmala L. (Nitrariaceae), L. sativum L. (Brassicaceae), Pistacia 2.5. Antibacterial assay
lentiscus L. (Anacardiaceae) and C. arvensis L. (Asteraceae)] were
tested for their antibacterial activity against seven bacteria strains The evaluation of the antibacterial activity was performed by
(Staphylococcus aureus, E. coli, Listeria monocytogenes, Pseudomonas the disk diffusion method (Zaidan et al., 2005). Briefly, the bacte-
aeruginosa, Klebsiella sp.,Salmonella enteritidis, and Bacillus cereus). rial strains were cultured in Luria-Bertani agar (LB, Sigma, Germany)
Different parts of each plant were extracted with organic solvents and incubated at 37 ◦ C overnight. A colony of each bacteria strain
of increasing polarity (hexane, dichloromethane, ethyl acetate and was suspended in 0.9% sodium chloride. The turbidity was adjusted
methanol) and all extracts (one hundred thirty two) were tested. to 0.5 McFarland to yield approximately 108 CFU/ml. Mueller Hin-
The natural antibacterial compound(s) was (were) isolated from ton Agar (MHA) (Becton Dicknson M. D USA) was prepared according
the active extract(s) through bio-guided assays and identified by to the manufacturer’s instruction (35 g of media was mixed with
chromatographic methods coupled with mass spectrometry. one liter of distilled water and autoclaved at 121 ◦ C for 15 min) and
dispensed into 90 mm sterile agar plates (Oxoid, UK). Sterile Petri
plates were then inoculated with the test bacterial suspensions
by surface spreading using a cotton swab. Paper disks (Whatman,
2. Materials and methods diameter = 5 mm; porosity = 6 ␮m) were impregnated with 20 ␮l of
extract mother solution (1000 ␮g/disk) for the screening test, and
2.1. Chemicals with 20 ␮l of solutions at concentration ranging from 25 mg/ml to
0.1 mg/ml for extracts exhibiting inhibition zone at 1000 ␮g/disk.
All the solvents used for extraction procedures (hexane, The impregnated disks were allowed to dry under flow hood (for
dichloromethane, ethyl acetate, acetone and methanol), and 3 h) then applied on the agar surface. The inoculated plates were
sodium chloride were obtained from Lab-Scan Analytic Science, incubated at 37 ◦ C overnight. Paper disks impregnated only with
Poland. Formic acid, water, and methanol for MS analyses, extraction solvents were used as negative control. Erythromycin
and methyl thiazolyl tetrazolium chloride were purchased from (15 ␮g/disk), tetracycline (30 ␮g/disk), and oxacillin (5 ␮g/disk)
Sigma–Aldrich, Milan, Italy. were used as positive control. Antibacterial activity was deter-
mined as inhibition zone and measured as the minimal inhibitory
quantity (MIQ)/disk. The MIQ is defined as the lowest quantity
(␮g/disk) of extract showing no growth. The experiments were
2.2. Plant material carried out in duplicate.

Different aerial parts and roots of ten Mediterranean plants 2.6. Detection and preparation of the active fraction by
were collected between March and July 2010 from middle and TLC–bioautography
south regions of Tunisia. The selected parts for each plant are listed
below. The identification of plant material was confirmed by Prof. The components of active extract were separated by Thin-Layer
Abderrazak Smaoui (Laboratory of Extremophile Plants—Center of Chromatography (TLC) bioautography. Ten ␮l of mother solution
Biotechnology of Borj Cedria): D. harra (leaf, flower, stem and root), extract was deposed on pre-coated silica gel 60 F254 aluminum
Ecballium elaterium (fruit, leaf, flower and stem), P. tomentosa (fruit, plate (20 × 20 cm; layer thickness, 0.20 mm; Merck, Germany)
leaf, flower and stem), C. arvensis (leaf, flower, stem and root), M. and migrated using hexane/dichloromethane/acetone in the ratio
communis (fruit, leaf and stem), S. villosum Mill. subsp. Villosum (leaf, 1:1:1.5-v/v/v as mobile phase. After separation of the different con-
stem, mature fruit and immature fruit), S. sodomaeum (fruit, leaf and stituents, the plate was allowed to dry at room temperature, and
stem), Peganum harmala (leaf, stem, seed and flower), L. sativum observed under UV 254 nm. Then, the plate was placed into sterile
(seeds) and Pistacia lentiscus (leaf, stem and fruit). Petri plate inoculated with the most sensitive bacterial suspension

Please cite this article in press as: Benzekri, R., et al., Isolation and identification of an antibacterial compound from Diplotaxis harra
(Forssk.) Boiss. Ind. Crops Prod. (2015), http://dx.doi.org/10.1016/j.indcrop.2015.11.059
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Fig. 1. Total ion chromatogram (TIC) of sulphoraphane (box A), MS spectrum (box B), MS/MS spectrum (box C), and MS3 spectrum (box D).

(108 CFU/ml) against the active extract. Once dried, the plate was ted column oven set at 25.0 ± 0.5 ◦ C, and a diode-array detector
incubated overnight at 37 ◦ C and finally 5 ml of methyl thiazolyl (DAD) set at 254 nm, and a vacuum degasser connected to an
tetrazolium chloride (MTT) solution (5 mg/ml) were added. The LCQ Advantage Max ion trap mass spectrometer (all from Thermo
inhibition zones corresponding to the area of the active fractions Fisher Scientific, Waltham, MA) through an electrospray ionization
appeared as colored spots on a dark blue background. (ESI) source. The ion trap operated in data-dependent, full scan
For preparative purpose, 500 mg of dried active extract were (100–1000 m/z), zoom scan, and MSn mode to obtain fragment ion
fractionated on a silica gel 60 F254 glass plate (20 × 20 cm; Glass m/z with collision energy of 35% and an isolation width of 3 m/z . The
Backed TLC Extra Hard Layer 60 Å; Silicycle, Canada), as previously positive parameters of the ion mode ESI source had previously been
described. The bands corresponding to the bacterial growth inhi- optimized at a ionization voltage of 4.5 kV, a capillary temperature

bition zone were scraped off and then dissolved in the migration of 250 C, a sheath gas flow rate of 55 arbitrary units (AU), and an
solvent (hexane/dichloromethane/acetone) with a modification auxiliary gas flow rate of 5 AU. The Thermo Fisher Scientific Excal-
of the proportion (1:3:1-v/v/v) under agitation for 20 min. The ibur 2.0 software was used for data acquisition and processing. No
dissolved product was filtered and concentrated using a rotary- marked variations attributable to the nature of the detected frag-
evaporation unit. The dried active fraction (35 mg) was dissolved ments or their relative intensities were observed in 3 independent
in 1 ml of 75% ethanol and used for identification of the active com- assays performed to analyze the sample.
pound(s) and for the antibacterial assays after elimination of the
solvent by nitrogen.
2.8. Identification of the active compound(s) by GC–MS

2.7. Identification of the active compound(s) by The identification of the isolated active compound was con-
HPLC-DAD-ESI-MSn firmed using a gas chromatography HP 5890 (II) interfaced with a
HP 5972 mass spectrometer (5975C inert XL MSD, Agilent Technolo-
The separation of the active fraction was carried out using a gies, Palo Alto, CA, USA) with electron impact ionization (70 eV). The
Gemini C18 (150.0 × 2.1 mm, i.d., 5 ␮m) with a Hypersil Gold C18 used capillary column was HP-5 MS (30 m, 0.25 mm, coated with
guard column (10.0 × 2.1 mm i.d. 5 ␮m, all from Phenomenex, Tor- 95% dimethylpolysiloxane, 5% phenyl methyl silicone, 0.25 mm film
rance, CA). The mobile phase consisted of 0.1% formic acid in thickness; Hewlett-Packard, CA, USA). The column temperature was
water and methanol 85/15 v/v, at a flow rate of 0.3 ml/min. LC–MS programmed to rise from 50 to 240 ◦ C with a rate of 5 ◦ C/min.
analyses were performed using a Thermo Finnigan Surveyor Plus The carrier gas was helium with a flow rate of 1.2 ml/min and
HPLC apparatus equipped with a quaternary pump, a Surveyor Plus the split ratio was 60:1. Scan time and mass range were 1s and
autosampler set at 5 ␮l injection volume, a degasser, a thermostat- 40–300 m/z, respectively. The characterization of the active com-

Please cite this article in press as: Benzekri, R., et al., Isolation and identification of an antibacterial compound from Diplotaxis harra
(Forssk.) Boiss. Ind. Crops Prod. (2015), http://dx.doi.org/10.1016/j.indcrop.2015.11.059
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The used method is the disk diffusion assay. The results correspond to the inhibition diameter (mm) and represent the mean of duplicate values. The deposed quantity is 1 mg/disk for all the extracts mentioned above. Note: (−)
B. cereus ATCC
14759

12
14

22
30













Fig. 2. Chemical structure of sulforaphane (1-isothiocyanato-4-methylsulfinyl-
butane).
S. enteritidis ATCC

pound was made by comparing retention time, Kovats retention


indice (KI) calculated relative to n-alkanes (Alkane standard solu-
DMB560

tion C8-C20 4070 Fluka) on apolar column HP-5MS. and recorded


mass spectra with those stored in the Wiley/NBS mass spectral
25
16

14
27













library of the GC–MS data system of the apparatus.

3. Results
E. coli ATCC

The antibacterial activity of the extracts was evaluated by the


determination of the minimal inhibitory quantity (MIQ)/disk. All
25,922

the extracts obtained from C. arvensis, P. tomentosa, Peganum har-


22
12

15
28












mala and Solanum Mill. subsp. villosum did not show any activity
against the tested bacteria strains.
Thirteen extracts exhibited moderate activity (1000 ␮g/disk
K. sp. CIP 104727

<MIQ< 125 ␮g/disk) against S. aureus and L. monocytogenes : ethyl


acetate extract of L. sativum seed, hexane extract of Ecballium ela-
terium fruit, methanol and ethyl acetate extracts of M. communis
leaf and fruit, methanol extract of M. communis stem, methanol
11
20














and ethyl acetate extracts of Pistacia lentiscus leaf and stem, ethyl
acetate extract of Pistacia lentiscus fruit, and ethyl acetate extract of
S. sodomaeum stem. Only dichloromethane extracts of D. harra root
and flower revealed significant activity with MIQ values lower than
P. aeruginosa

100 ␮g/disk (MIQ = 60 ␮g/disk for root, and 30 ␮g/disk for flower)
ATCC 27853

against S. aureus, and MIQ = 30 ␮g/disk and 15 ␮g/disk against L.


monocytogenes for root and for flower, respectively. These two
12
23

extracts also showed a moderate activity against B. cereus, E. coli,
















and S. enteritidis, but no activity against P. aeruginosa and Klebsiella


sp. (Table 1).
As dichloromethane extract of D. harra flower was the most
L. monocytogenes

active, the attention was focused on this plant part for the isola-
ATCC 19195

no antibacterial activity, H: hexane, DM: dichloromethane, AE: Ethyl acetate, MeOH: methanol.

tion and the identification of the bioactive compound(s). On TLC


plate, a band with retardation factor (Rf ) = 0.33 revealed an inhi-
bition zone when incubated with S. aureus and L. monocytogenes
>50
>50
18
8
12
13
12
11

25
20
20
18
18
10
39
36
33

strains using MTT solution. After scraping, this fraction was evalu-
ated for its activity against these two bacteria strains, and the MIQ
values were 2 ␮g/disk for both.
The active fraction was characterized by HPLC-DAD-ESI-MSn .
S. aureus ATCC

The HPLC profile showed only one peak and the MS spectrum reg-
Antibacterial activity of the extracts showing a growth inhibition zone.

istered in positive ionization mode revealed the pseudomolecular


25,923

ion at m/z 178 [M + H]+ ; its fragmentation led to some specific prod-
>50
>50
25

11

12

12

14

38
35
34
10

10

uct ions at m/z 114 corresponding to the base peak and at m/z

9

8

119. Further m/z 114 fragmentation in MS3 experiment led to m/z


72 as specific product ion (Fig. 1). This fragmentation pattern led
Erythromycin (30 ␮g)
Extract

MeOH

MeOH
MeOH

MeOH

MeOH

to the putative identification of sulforaphane (1-isothiocyanato-4-


Tetracycline (15 ␮g)
DM
DM

methylsulfinyl-butane, SFN) (Fig. 2) by comparing the data here


AE

AE
AE

AE

AE

AE
AE
H

Oxacillin (5 ␮g)

obtained with those reported in literature (Al Janobi et al., 2006;


Wang et al., 2011). This structure was confirmed by GC–MS analy-
Flower

sis and the GC profile showed only sulforaphane peak at 4.752 min
Organ

Leave

Leave
Stem

Stem

Stem
Fruit

Fruit

Fruit
Seed
Root

(Fig. 3), the KI = 1789 and the mass fragments obtained were m/z
(%): 160 (76), 114(10), 85(7), 72(100), 64(15), 55(34), in agree-
ment with previously published data for this compound (Azizi et al.,
2011).
Solanum sodomaeum
Ecballium elaterium

The estimation of the antibacterial effect of sulforaphane was


Lepidium sativum

evaluated by comparing its inhibition diameter with that of stan-


Antibiotics

dard antibiotics (erythromycin, tetracycline and oxacillin), testing


Diplotaxis

Pistacia

all molecules at 10 ␮g/disk (Table 2). Even showing a lower inhi-


Myrtus

lentis-
Table 1

harra
Plant

com-
mu-

bition diameter, the activity of sulforaphane could be considered


cus
nis

interesting if it is taken into account that this compound was

Please cite this article in press as: Benzekri, R., et al., Isolation and identification of an antibacterial compound from Diplotaxis harra
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Fig. 3. GC–MS profile of sulforaphane.

extracted from natural product (vs synthetic product for the con- Mohammed et al., 2011). Concerning its antibacterial activity, Atta
sidered antibiotics). et al. (2011) found that methanolic extracts obtained from the aerial
part were active against E. coli, Pseudomonas aeruginosa, and Kleb-
4. Discussion siella pneumonia, differently from the here exposed results. On the
other hand, Akbar and Al-Yahya (2011) found similar data when the
D. harra is a desert plant belonging to the Brassicaceae family. chloroform extract of the aerial part was tested against S. aureus.
A phytochemical analysis of the aerial parts showed the presence In our study, dichloromethane extracts of D. harra flower and
of flavonoids, glucosinolates and sterols (Atta et al., 2011). The root exhibited the best antibacterial effect and the compound
flavonoid glycosides of D. harra was reported to have a promis- responsible for this activity was identified as sulforaphane by
ing cytotoxicity with the ability to inhibit tumor cell growth (D. HPLC-DAD-ESI-MSn and confirmed by GC–MS. This product was

Table 2
Antibacterial activity of SFN and three usual antibiotics against the most sensitive tested bacteria strains.

Erythromycin Tetracycline Oxacillin Sulforaphane

Staphylococcus aureus ATCC 25923 32 38 38 15


Listeria monocytogenes ATCC 19195 33 40 39 16

The used method is the disc diffusion assay. The results correspond to the inhibition diameter (mm) and represent the mean of duplicate values. The deposed quantity is
10 ␮g/disk for all the compounds mentioned above.

Please cite this article in press as: Benzekri, R., et al., Isolation and identification of an antibacterial compound from Diplotaxis harra
(Forssk.) Boiss. Ind. Crops Prod. (2015), http://dx.doi.org/10.1016/j.indcrop.2015.11.059
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previously reported and characterized in some Brassicaceae plants Acknowledgement


(Hong et al., 2005; Liang et al., 2005; Wang et al., 2011) as bioac-
tive agent, but never before isolated from D. harra as antibacterial The authors thank Pr. Abderrazak Smaoui (Laboratory of
compound. Extremophile Plants—Center of Biotechnology of Borj Cedria) for
Sulforaphane is an isothiocyanate naturally present in widely his help in some plant materials collection and their identification.
consumed vegetables as bioactive metabolite of glucoraphanin, a
characteristic glucosinolate of vegetables belonging to the Brassi- References
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Please cite this article in press as: Benzekri, R., et al., Isolation and identification of an antibacterial compound from Diplotaxis harra
(Forssk.) Boiss. Ind. Crops Prod. (2015), http://dx.doi.org/10.1016/j.indcrop.2015.11.059
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Please cite this article in press as: Benzekri, R., et al., Isolation and identification of an antibacterial compound from Diplotaxis harra
(Forssk.) Boiss. Ind. Crops Prod. (2015), http://dx.doi.org/10.1016/j.indcrop.2015.11.059

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