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Estimation
ofvonBertalanffy
GrowthCurveParameters
from
RecaptureData
Ian R. James
SchoolofMathematical
andPhysicalSciences,MurdochUniversity,
Murdoch6150,Western Australia
SUMMARY
A simplemethodofconstructing estimating forparameters
functions in thevonBertalanffygrowth
modelE[y(t)] = L[ 1 - exp(-Kt)]is presentedfortag-recapture
datawhentheage oftheanimalis
unknown.The estimating functions are unbiasedunderverygeneraldistributional assumptions
providedK does notvarybetweenanimals.Simulations of growth in lobsters
and whelksindicate
thatthemethodperforms wellprovidedtheinitialcapturetimesand recapture varyover
intervals
reasonableranges.Comparison is madewithmethods basedon leastsquares,whichhavebeenshown
to be generally
inconsistent.
1. Introduction
The vonBertalanffy
growth curveis usedextensively in fisheries
and otherareasto model
thegrowthof an animalas a function of age fromsomeoriginto.If y(t) representsthe
growth measurement(whichwe refer to as lengthforconvenience) aftertimet,thenfora
singleanimalthemodelassumes
Keywords:Distribution-free
estimation;
Growthcurves;
Simulation;
Tag-recapture
data;Unbiased
estimating
functions.
151l9
2. Estimation
2.1 Introduction
Assumethateach animal is subjectto a singlerecaptureand that(2) holds forthe
measurements. The residualsareallowedto be correlated and haveunspecified
arbitrarily
variances,and L to varybetweenanimalsaccordingto a distribution withmeanLo and
varianceCL. On theotherhand,K is takento be constant,Ko say,overall animals.
Usingobviousnotation, let
Ti = Y2i - Yli - (Lo - yli)[l - exp(-KoAi)]
forthe ith animalin a sampleof size n. It thenfollowsfrom(3) thatE(,qi)= 0, the
expectationherebeingalso overthedistribution ofL. In general,thedistributions
ofthe
maydependon L, and thiscomplicates
residuals for
theexpression var(,qi).Whilstit is not
in
necessary our subsequentdiscussion, if we to
were assume that the residuals were
independent ofL, thenvar(fl1)
= E(n7) is givenby
2i+ Cl2iexp(-2KOi\i)
-2p11~O2exp-Ko~~)~L[
eXP(-KOl\i)]2~~~~~~~xp~~
- 2PiCliC2ieXP(-K0i\i)
+ CL[1 -
f2 = E Ai(Lo - yli)exp(-KoAj)qi.
Thentheestimating equationsforFabens'method, obtainedbyequatingpartialderivatives
ofE q; to zero,maybe written A1= 0 and f2= 0, wherethe"hat"indicatesreplacement
of parameters by theirestimates.An important ingredientin the usual derivationof
properties suchas consistencyand asymptotic normality ofestimatorsfromsuchequations
is thattheestimating functionsf' andf2 shouldbe unbiased,following theterminology of
Godambeand Heyde (1987); namely,E(f1) = 0 and E(f2) = 0 [see, for example,
Maritz(1981,?1, AppendixA)]. Whilstfisatisfies thiscondition,E(f2) involvesE(yliti),
whichin turndependson theunknownage oftheanimalifL is notconstant, and it is
easy to checkthatf2 is not an unbiasedestimating functionunlessthe model has no
residualsand (J = 0. It is thisbias inf2 thatleadsto thebiasesin parameter estimators
notedby Mallerand deBoer(1988). Similarcommentappliesto weighted leastsquares.
Morton(1981a) notedthesamebias problemin leastsquaresestimating functionsrelated
to insectdevelopment times.
It maybe possiblein somecasesto correct forthebiasinf2.Thisis true,forinstance, if
L is constant and theresidualsare independent withconstantvariancea 2. Thenone can
showthatE(Af)= E Aizexp(-2KO A,)a2, and sinceE[n-1E ~7t(l + exp(-2KOizi))]= U2
this bias may be correctedusing observablequantities.Further,if one minimises
E exp(-2Kq2/[l)],
%I[1 + obtainedbyweighting each termby theinverseof itsvariance,
thenestimating functionsobtainedbydifferentiation are unbiased.The following simula-
tionsillustratetheuse oftheseestimating functions
comparedwiththoseofFabens(1965).
We tookn = 200, K0 = .0007,and Lo = 115,to approximate theparameters foundin
Fabens'method leastsquares
Weighted
Ko Lo Ko Lo
Mean .00075 110.62 .00070 115.63
SD .00004 4.02 .00004 4.67
2.3 UnbiasedEstimating
Functions
A straightforward
wayofobtaining unbiasedestimating
functions fromtheqiis to ensure
that any multiplying weightsare functionsonly of the Ai and the parameters. Let
h1i(A,Ko,Lo) and h2i(A,Ko,Lo) be twosuchfunctions.
It followsimmediatelythat
E[Z h1i(A,Ko, Lo)n] = 0 and E[Z h2i(A,Ko, Lo)i] = 0,
givingcorresponding
estimating
equations
E Ko,Lo)7i = 0 and L h2i(A,Ko, Lo)"i = 0.
h1i(A,
It remainsan openquestionas to whichfunctions h, and h2are "best."Application
of
theresultsin Morton( 1981b) givesoptimalweightsthatgenerallydependon theunknown
ages at initialrelease(R. Morton,personalcommunication), so some modification is
required.Verysimplechoiceswhichwehavefoundto workreasonably wellin simulations,
andwhichareconsidered intherestofthispaper,arehii1 andh2i =Li, givingestimating
equations
1=Ei=0 and g = A Lri = O. (6)
Theseequationsrequirethatnot all Ai be equal, whichwillgenerally be the practical
andwhichwillbe assumedhenceforth.
situation, We conjecture thatifL is allowedto vary
between thenidentifiability
individuals, problems preventconsistent distribution-free
esti-
mationoftheparameters ifAi= i\forall i.
Sinceg1and g2are sumsofindependent, non-identicallydistributed
randomvariables,
theywill,aftersuitablestandardisation,
be asymptotically bivariatenormalprovidedthe
standardisedtermsin thesumsbecomeuniformly asymptoticallynegligible (Rao, 1973,p.
128),whichin practicedemandsthatno smallnumberofrecapture intervals Aidominates
therest.Generalestimating equationtheory[see,forexample,Maritz(1981, ?1.7)] may
thenbe used to showthatthe estimators Ko and Lo are consistentand asymptotically
normally distributed
undermildconditions, withcovariancematrix
C = E(G)-'DgE(GT)-',
where
Dgf E i~
"~<
tiZ\2 Z2
2.4 Distribution
ofAgeat FirstRelease
The ages at firstreleaseare regardedas fixedquantitiesin (2). However,one mightalso
wishto considerthedistribution oftheseages,regardingt1as a randomvariable.Assume
thatt1and L areindependent. Thenfrom(2) it followsthat
E = E[exp(-Koti)] = 1 - E(yi)/Lo,
whereE(y1) is no longerconditional
on ti. If,in addition,thevarianceoftheresidualsis
smallbycomparison withCL, then
V = var[exp(-Kot1)] E(yI L)/(c2 + Lo) - [E(y1)/Lo]2.
The meanand varianceoft1can be approximated
undertheseconditions
by
E(ti) ~V/(2KOE2) - log(E)/Ko, (8)
var(t1) V/(KoE)2.
andSimulations
3. Computation
Jointsolutionof 'I = 0 and g2 = 0 can be readilycarriedout by a varietyof numerical
methods.One approachis to solveforLo in termsofKo fromgl followed by substitution
intog2,thusconvertingtheiterativesearchto onedimension.A simplegraphicalapproach
in whichbothg2 and Lo are plottedas functions of Ko can thenbe implemented, or a
bisectionmethodcan be used.Alternatively, we havefoundit quiteefficient
and easyto
programa simpleNewtontwo-dimensional method.Typicallyonlyfouror five
iterative
iterations
are neededto achievea highdegreeofaccuracyfromreasonablestarting values.
Table 1
Simulationsofwestern
rocklobster
growth.In eachcase L - N( 115,100),Ko= .0007,and 200
replications
weregenerated.
U(a, b) denotestheuniformdistribution
on(a, b). Entriesare inthe
ordermeanfrom(6), SE, meanfromFabens'method, SE
n = 200 n = 500
U(30, 360) U(30, 1,080) U(30, 360) U(30, 1,080)
t, ko LO ko Lo ko Lo ko Lo
U(360,1,080) .00073a 125.5 .00072 114.8 .00070 119.1 .00069 115.9
.00029 45.9 .00011 8.8 .00018 20.1 .00006 4.9
.00046 148.5 .00048 140.6 .00046 148.6 .00048 139.8
.00005 10.4 .00005 9.6 .00003 6.5 .00003 5.2
U(720, 1,440) .00082b 121.2 .00071 115.6 .00074 117.7 .00071 115.0
.00049 31.7 .00012 7.4 .00025 19.4 .00007 4.5
.00029 188.1 .00030 171.7 .00029 187.3 .00031 168.7
.00005 21.9 .00005 17.2 .00003 12.5 .00003 9.5
a 3 caseswithno solution.
b2 caseswithno solution.
2 2
0 /7
x --
-2 -2
3 3 l ll-3
-3 -2 -1 0 1 2 3 -10 -5 0 5
w 1~ ~ ~~~~~U -1-
(b) (b)
3
-
2 2
0
Cd)
0~~~~~~~ u
J
L
-2 -2
-4 -2 0 2 4 -4 -2 0 2 4
4. WhelkData
100 100
E
u_
50 50
o 0
0.000 0.001 0.002 0.003 0.000 0.001 0.002 0.003
Estimate of K Estimate of K
(b) Method
(6) (b)Fabens'method
65 65 I
60 60
0 :j
on 555
55
50 ..;50
45 I-
45
0.0005 0.0010 0.0015 0.0020 0.0025 0.0005 0.0010 0.0015 0.0020 0.0025
Estimate of K Estimate of K
Figure 2. Scatterplotsofparameter
estimates forsimulatedwhelkdata,n= 500,Lo = 50, fo=30,
Ko = .0015,
el, C2 N(O,2) (seetext).(a) the U(100, 500),A -eU(30,360);(b) t1 - U(300, 1,000),
A -U(30, 1,080).
(i) Shortest
recapture
interval interval
(ii) Longestrecapture
Ko Lo Ko Lo
Est. .0014 49.6 Est. .0014 49.8
SE .00063 7.92 SE .00014 1.21
5.1 RandomK
In thepreceding discussionK has beenassumedconstantfromanimalto animal.IfK is
randomwithmeanKo and variancea2 > 0, thenE(,qi)$ 0. It willtypically be thecase,
however,that U2 is smallby comparisonwiththe varianceof qj, so thattheestimating
functionswillstillbe approximatelyunbiased.No comprehensive analysisoftheapproxi-
mationis attempted here,buttheeffectsare illustrated by somesimulations.
briefly For
thesetheparameters werechosenas forthewhelkdatain Section3 withsamplesize 500,
t1uniformlydistributed over300 daysto 1,000days,and l\uniformlydistributed
overthe
range30 daysto 1,080days.The asymptotic lengthparameter L was normalwithmean
50mmandvariance30 mm2,andtheresiduals werenormalwithvariance2. K wasnormal
withmean.0015 and standarddeviations(i) .00025 and (ii) .0004. Mean estimatesand
standarderrorsfrom200 replicates wereobtainedas below:
Whilstfurther
investigation
oftheeffectsofrandomK iswarranted,
theseexamplesindicate
thatevenquitehighrelativevariation
in K maynotundulybiastheestimates.
where
77li = y2i - yli - (Lo - yiv)[l - exp(-Ko Ali)],
72i = Y3i - Yli - (Lo - Y1i)[l - exp(-K0A2i)].
Our limitedexperiencewiththeseequationssuggests to have n
thatit is moreefficient
animalswithtworecaptures than2n animalswithsinglerecaptures overthesame time
span,as mightbe expectedgiventhatestimatesofcurvature and asymptoteare required.
Notethatwithtworecaptureswecan allowall animalstohavethesamerecapture intervals.
Withmorethantworecaptures, or withunequalnumbersperanimal,theconstruction
ofappropriate equationsis notclear.Withmultiplerecaptures,
estimating theindividual
growthcurvesmaybe estimated,thusproviding muchmoreinformation thanis available
fromsinglerecaptureswithunknownages of release.These issueswill be addressed
separately.
6. Discussion
The estimation methodbased on (6), or modifications usingotherfunctions hi and h2,
appearsto overcometheproblemsofinconsistency inherentin theleastsquaresmethods
ofestimation in thevon Bertalanffygrowth modelfromsingle-recapture data.It willgive
parameter estimates withconsiderablevariationand skewness, or possiblyno solutionat
all,ifrecaptureintervalsvaryovera smallrange,butthismaybe a desirablewarning that
toomuchis beingexpectedofthedatainthatcase.The methodis verysimpleand requires
fewmodelassumptions.
Thereare severalaspectsofthemethodneedingfurther work,however.Theseinclude
moreprecisestudyof asymptotics, choiceof optimalestimating functions, methodsof
handling mixedmultiple-recapturenumbers, and theeffectsofrandomK. In particular, it
willbe important to seeifmodifications
ofgl andg2 thatretaintherelatively lowvariation
ofFabens'method,whilstalso correcting forbias,can be foundforsmallAi.Otherissues
to considerincludetheincorporation ofcovariatesin a generalwayand possibly theuse of
morerobustequations.
ACKNOWLEDGEMENTS
RESUME
Une methodesimplepour construire des fonctionsd'estimationdes parametres
du modelede
croissance E[Y(t)]= L[1 - exp(-Kt)]estpresentee
de vonBertalanify pourdesdonneesdemarquage-
recapture
quandl'agede l'animalestinconnu.Les fonctionsd'estimationsontnonbiaiseessousdes
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ReceivedJune1989;revised
December1989andMay 1990;accepted
August1990.