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Review

Tansley insight
Connecting the pieces: uncovering the
molecular basis for long-distance
communication through plant grafting

Author for correspondence Hannah R. Thomas and Margaret H. Frank


Margaret H. Frank
Tel: +1 607 255 1734 Plant Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA
Email: mhf47@cornell.edu
Received: 28 December 2018
Accepted: 19 February 2019

Contents

Summary 1 V. Interorganismal communication through mobile miRNAs 6

I. Introduction 1 VI. Conclusion 6

II. Defining mobile signals 2 Acknowledgements 7

III. Seasonal changes in development 2 References 7

IV. Systemic signals for drought stress, starvation, and sunlight 4

Summary
New Phytologist (2019) Vascular plants are wired with a remarkable long-distance communication system. This network
doi: 10.1111/nph.15772 can span from as little as a few centimeters (or less) in species like Arabidopsis, up to 100 m in the
tallest giant sequoia, linking distant organ systems into a unified, multicellular organism. Grafting
Key words: abiotic responses, is a fundamental technique that allows researchers to physically break apart and reassemble the
interorganismal communication, long-distance transport system, enabling the discovery of molecular signals that underlie
long-distance signaling, plant grafting, intraorganismal communication. In this review, we highlight how plant grafting has facilitated
root–shoot communication, sustainable the discovery of new long-distance signaling molecules that function in coordinating
agriculture. developmental transitions, abiotic and biotic responses, and cross-species interactions. This
rapidly expanding area of research offers sustainable approaches for improving plant
performance in the laboratory, the field, the orchard, and beyond.

been used to discover mobile proteins, mRNAs, small RNAs, and


I. Introduction
small molecules that impact plant morphology (Kim, 2001;
Grafting is an ancient technology that has undergone a modern Haywood et al., 2005), reproductive transitions (Corbesier et al.,
renaissance. The first written record of plant grafting dates back to 2007; Jaeger & Wigge, 2007), host–microbe and plant–parasite
424 BC (Mudge et al., 2009), and the practice itself probably interactions (Shahid et al., 2018; Tsikou et al., 2018), root–shoot
originated several millennia before the written record. Grafting is balance (Lin et al., 2014; Spiegelman et al., 2015; Chen et al., 2016;
widely used in agriculture to increase yield, modify branch Landrein et al., 2018), and other fundamental organismal processes
architecture, and enhance biotic and abiotic stress tolerance. (Martin et al., 2009; Navarro et al., 2011; Takahashi et al., 2018;
Although grafting plays a central role in the successful production Tylewicz et al., 2018). Advances in genomic resources and
of many crops, the underlying mechanisms that make particular molecular techniques that support grafted crops make it possible
graft combinations productive remain largely unknown. Indepen- for the distinct fields of agricultural and experimental grafting to be
dent of its application in agriculture, grafting experiments have merged. In this review, we highlight newly discovered mobile

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signals that have the potential to be translated into agricultural RNAs and proteins that have been shown to move, but do not yet
systems for improved crop resilience. have well-defined functions in long-distance communication.
Reinvigorated interest in plant grafting has led to a recent burst Future work focused on deciphering the nature and function of
in publications on the movement and impact of graft-mobile the plant mobileome will help to clarify the degree to which
RNAs, proteins, and small molecules. In some cases, the grafting- long-distance macromolecular movement is synonymous with
related terminology is ambiguous. In Box 1 and Fig. 1, we define long-distance signaling (Kehr & Kragler, 2018; Liu & Chen, 2018;
terminology and illustrate techniques that are commonly used in Morris, 2018).
plant grafting.
III. Seasonal changes in development
II. Defining mobile signals
Plants use seasonal cues to align developmental transitions, such as
Until relatively recently, it was assumed that the majority of RNAs flowering, bud burst, and the formation of storage organs, with
and proteins are cell-autonomous (i.e. they stay within the cells in hospitable environmental conditions (B€aurle & Dean, 2006). The
which they are produced), with the exception of a few mobile perception of seasonal information, measured as the photoperiod
molecules that function in intercellular and long-distance com- (the day : night ratio) in mature leaves, is physically separated from
munication. However, phloem sap profiling (Buhtz et al., 2008; resulting developmental transitions that typically occur at the apical
Gaupels et al., 2008) and studies using polymorphism-based ends of plants. This observation led to an initial hypothesis that a
detection of mobile mRNAs and small RNAs in heterografted long-distance signaling molecule moves from mature leaves into
plants (Yoo et al., 2004; Molnar et al., 2010; Hannapel, 2013; the shoot apex to promote flowering (Knott, 1934). To test this
Thieme et al., 2015; Lewsey et al., 2016; Zhang et al., 2016; Guan hypothesis, Mikhail Chailakhyan pioneered one of the first grafting
et al., 2017) demonstrate that a large number of RNAs and proteins experiments used to track mobile signals; he attached photoperiod-
are mobile, indicating that not everything that moves necessarily sensitive short-day scions to long-day stocks and vice versa
serves a signaling function. In this review, we refer to graft-mobile (Cha€ılakhyan, 1937). Using these photosensitive heterografts, he
‘signals’ as molecules that are capable of acting at a distance to demonstrated that exposure of the stock genotype to inductive
influence organismal processes, such as developmental transitions, photoperiods (i.e. long-day stocks to long-day light treatments) was
morphological responses, nutrient acquisition, and biotic interac- sufficient to trigger reproductive transitions in the scion. These
tions. The extent to which mobile macromolecules function as results formed the basis for Chailakhyan’s ‘florigen’ hypothesis,
signals within the plant communication network (Zhang et al., stating that a mobile hormone travels through the plant’s long-
2016) remains an open question (Calderwood et al., 2016; Lee & distance communication network from mature leaves into the
Frank, 2018; Morris, 2018). Therefore, we suggest the use of a shoot apex to promote flowering (Cha€ılakhyan, 1937).
separate term, the ‘mobileome’, to discuss the mass collection of It has been nearly a century since the initial demonstration that
florigen functions as a mobile signal (Cha€ılakhyan, 1937), and
nearly two decades since its molecular characterization as
FLOWERING LOCUS T (FT) (Takada & Goto, 2003; An
Box 1 Commonly used grafting terminology
et al., 2004; Corbesier et al., 2007; Jaeger & Wigge, 2007), and
‘Grafting’ refers to the physical joining of separate plant parts so that yet a complete understanding of the mechanisms for florigen
they share an interconnected vascular system (Melnyk & Meyerow- function remain elusive. In addition to traveling as a protein
itz, 2015). Grafts can be made between any plant parts; however, the signal (Corbesier et al., 2007; Jaeger & Wigge, 2007; Mathieu
most common graft combination is between ‘stocks’ that comprise et al., 2007), there is a substantial body of evidence demonstrat-
the root system and ‘scions’ that comprise the shoot system.
ing that FT and related phosphatidylethanolamine-binding
‘Heterografts’ are formed by grafting distinct genotypes and/or
environmental treatments together (Fig. 1b), whereas ‘homografts’ protein (PEPB) family members move as transcripts, some of
are formed by grafting together identical genotypes and/or envi- which exhibit selective intercellular trafficking (Li et al., 2009,
ronmental treatments (Fig. 1a). 2011; Jackson & Hong, 2012; Lu et al., 2012; Huang et al.,
‘Chimera’ is a generic term that refers to an individual composed of 2018; Luo et al., 2018). Whether these mobile mRNAs serve as
cells that are derived from independent zygotes (Rossant & Spence,
signals that contribute to the promotion of flowering is a long-
1998). Heterografts are technically chimeras; however, a wide
variety of other cellular arrangements are also defined as chimeras standing point of contention that has been challenging to resolve,
(Frank & Chitwood, 2016). Therefore, the terms chimera and graft because of the technical difficulty of separating the role of FT
should not be used interchangeably. One particularly confusing mRNA movement from the demonstrated function of FT protein
example of this relates to ‘graft chimeras,’ which consist of cells and in promoting reproductive transitions. Another addition to the
tissues derived from independent genotypes. These plants are
florigen story relates to the spatial regulation of FT, which was
produced by inducing shoot formation along graft junctions, but are
not themselves grafted plants (Tilney-Bassett, 1986). Although each long assumed to be expressed throughout phloem companion
of these terms sounds similar, they refer to distinct phenomena: cells. However, recent work shows that FT mRNA expression is
grafting allows researchers to study long-distance signals, whereas restricted to a previously unidentified, specialized cell type within
cell-layer chimeras, such as graft chimeras, enable the investigation the companion cell profile, indicating that FT production is more
of local, cell-to-cell movement.
spatially refined than once thought, and that morphologically

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(a) Homograft (b) Heterograft (c) Intertaxonomic graft (d) Genetic grafts

Common examples:

Scion

Graft
junction

Stock

Donor Taxon 1 (e.g. eggplant) OE donor WT donor


Recipient Taxon 2 (e.g. tomato) WT recipient Mutant recipient

(e) Transgenic tags (f) Environmental treatment graft


Noninductive Inductive Graft donor Transmit environmental signal
photoperiod photoperiod to recipient (florigen in this example)

Tag donor (e.g. pSUC2:GFP)


Nontransgenic recipient

Fig. 1 Applications of heterografting to uncover mobile molecules. (a) Homografting is performed by physically joining two of the same plants together, and is
commonly used as a control in grafting experiments. (b) Heterografting is a generic grafting technique that involves the physical joining of two or more
independent genotypes (or treatments in the case environmental mobile signals). Specific applications of heterografting are illustrated in (c–f). (c)
Intertaxonomic grafts are heterografts made between independent taxa (e.g. tomato and eggplant); these grafts are frequently used to map the biosynthesis
and mobility of small molecules, proteins and RNAs that differ between grafted species. Intertaxonomic grafting is also used agriculturally to confer beneficial
traits, such as disease-resistant, abiotic stress tolerance and invigorated growth, by combining wild-adapted rootstocks with elite scion cultivars. Note that
mobility can be mapped bidirectionally in intertaxonomic grafts (indicated by the double set of arrows). (d) Genetic grafts are heterografts made between
genetic variants, such as a wild-type donor grafted with a mutant recipient or an overexpression donor grafted with a wild-type recipient. These grafts are
commonly used to test whether a native gene product functions as a long-distance signal. (e) Transgenic tag grafts are used to track protein and RNA mobility
across the graft junction. Green fluorescent protein (GFP) is typically used to visually track proteins, whereas heterologous sequences attached to native
transcripts are used in conjunction with reverse transcription polymerase chain reaction to detect mobile RNAs. This grafting strategy is frequently used to
confirm putative mobile signals that are identified through genetic grafts. (f) Environmental treatment grafts are made between identical genotypes that have
been exposed to independent environmental stimuli, such as noninductive vs inductive photoperiods. Environmental treatment grafts led to the initial discovery
of florigen (Cha€ılakhyan, 1937), and have since been used to uncover a variety of mobile signals that are involved in coordinating organismal responses to the
environment. Blue–orange gradient arrows indicate the directionality of molecular movement from donor to recipient genotypes.

indistinguishable cell types can house distinct molecular func- onto FT1-expressing rootstocks, Tylewicz et al. (2018) demon-
tions (Chen et al., 2018). strated that loss of ABA-induced PD closure enables mobile FT1 to
In addition to controlling flowering time, PEPB family members regain entry into buds, inducing bud burst.
regulate a variety of other developmental transitions in a photope- Potato tuberization, the differentiation of underground stolons
riod-dependent manner (e.g. tuberization: Martınez-Garcıa et al., into vegetative storage organs, is also tightly linked to photoperiod.
2002; Navarro et al., 2011; Gonzalez-Schain et al., 2012, and bud Short days induce tuberization, whereas long days inhibit this
burst:Tylewicz et al., 2018). Work in aspen shows that the breaking developmental transition. Rather than being controlled by a single
of bud dormancy is controlled through two parallel pathways: an mobile signal, grafting experiments from the past two decades show
FT-mediated pathway and an abscisic acid (ABA) mediated that photoperiod-dependent induction of tuberization is con-
pathway, both of which are photoperiod-dependent. Long days trolled by multiple, overlapping signals, including mobile proteins
lead to the increased production of FT1 (an FT ortholog), (Navarro et al., 2011; Gonzalez-Schain et al., 2012; Teo et al.,
promoting the release of bud burst. The expression of FT1 alone., 2016), microRNAs (miRNAs) (Martin et al., 2009; Bhogale et al.,
however, is insufficient to break bud dormancy. In a second parallel 2013), and mRNAs (Banerjee et al., 2006, 2009). Although it has
pathway, short-day winter treatments lead to increased ABA long been known that the overexpression and movement of BEL5
concentrations, which in turn promote callose synthesis, leading to transcripts from mature leaves into stolons is sufficient to overcome
the blockage of plasmodesmata (PD) that connect buds to systemic the short-day requirement for tuberization (Banerjee et al., 2006,
plant signals. By grafting an ABA synthesis mutant scion, abil1-1, 2009), new work demonstrates that other members of the BEL

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(a)
SAM size
High light

CEP + CEP
receptor Key grafting experiments
HY5
trans- (b) HY5
CEPD Zeatin (shoot to root)
Donor
Scion hy5 HY5–GFP Recipient
hy5 Transgenic tag

Stock HY5–GFP hy5


hy5

(c) CEP peptides (d) CEPD peptides


(root to shoot) (shoot to root)

cepd1/ GFP–
Scion cepr1,2 WT
cepd2 CEPD1

Graft junction GFP– cepd1/


Stock WT cepr1,2
CEPD1 cepd2

High nitrogen HY5 + sucrose Low nitrogen


CEP (e) trans-Zeatin
NO3– (root to shoot)
NRT2.1
NO3– CEPD
– CEPD Scion ipt3.5.7 WT cyp735a1.2 WT
NO3

trans- Stock WT ipt3.5.7 WT cyp735a1.2


Zeatin

Fig. 2 Grafting uncovers a merry-go-round of long-distance signals involved in nitrogen (N) homeostasis. Grafting has facilitated the discovery of long-distance
communication networks that coordinate root–shoot growth responses to N availability (a). Light-responsive ELONGATED HYPOCOTYL 5 (HY5) was shown,
through a series of genetic and transgenic tag grafting experiments (b), to move from shoots to roots. When HY5 is transported into roots, it participates in
sucrose-dependent activation of nitrate transporter, NRT2.1 expression, promoting an increase in N uptake (Chen et al., 2016). An independently discovered
nitrate foraging system balances root growth through a root-to-shoot/shoot-to-root peptide relay. Low-N conditions induce the expression of C-TERMINALLY
ENCODED PEPTIDE (CEP) peptides in roots (a), which were shown to travel into the shoot where they bind CEP receptors (c; highlighted in blue) and trigger the
expression of CEP-DOWNSTREAM (CEPD) response peptides (highlighted in pink) that move back down into the root to induce NRT2.1 expression in a nitrate-
dependent manner (d) (Tabata et al., 2014; Ohkubo et al., 2017). High-nitrate conditions in roots activate the production of trans-Zeatin cytokinin precursors
(highlighted in purple), which were shown, through genetic grafting experiments (e), to move through the xylem into shoots where they participate in the
regulation of shoot apical meristem (SAM) size (Osugi et al., 2017; Landrein et al., 2018). Note that (b–e) illustrate key reciprocal grafting experiments that
were used to demonstrate the movement of long-distance N signals, but are not meant to illustrate all grafting experiments used in the discoveries described.

family also travel as transcripts (Ghate et al., 2017). Surprisingly, have identified signaling molecules that coordinate root–shoot
these mRNAs are associated with antituberigen signaling, sup- responses to drought stress (Takahashi et al., 2018), light (Chen
pressing rather than promoting tuberization (Ghate et al., 2017). et al., 2016), and nitrogen (N) availability (Tabata et al., 2014;
Chen et al., 2016; Ohkubo et al., 2017; Landrein et al., 2018).
When roots are exposed to water-limiting conditions, there are
IV. Systemic signals for drought stress, starvation, and
rapid physiological responses that protect the plant from desiccation,
sunlight
including ABA-mediated stomatal closure in the shoot (Roelfsema
Vascular plants are split between above-ground shoots that et al., 2004). A screen for drought-induced CLAVATA3/EMBRYO
participate in light capture and gas exchange and below-ground SURROUNDING REGION-RELATED (CLE) peptides in
roots that function in nutrient and water foraging. Coordinated Arabidopsis roots led to the identification of CLE25, a small,
energy allocation between root and shoot growth is essential for graft-mobile peptide that moves from roots to shoots (Takahashi
optimizing whole-plant performance. New studies using grafting et al., 2018). Grafting experiments demonstrated that wild-type

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Table 1 Movement and function of mobile molecules highlighted in this review.


Phytologist

Mobile molecule Grafting experiment(s) Function Path of movement References

Ó 2019 The Authors


Flowering Locus T Environmental treatment, Promotes flowering, tuberization, and/ From mature leaves into the Cha€ılakhyan (1937); Takada &
(FT), PEPB, FT1, confirmed with transgenic tags or bud burst in response to inductive meristems of recipient Goto (2003); An et al. (2004);
protein and and genetic grafting photoperiods scions, stolons and/or buds Corbesier et al. (2007); Jaeger
potentially mRNA & Wigge (2007); Li et al.
(2009, 2011); Navarro et al.
(2011); Jackson & Hong
(2012); Lu et al. (2012); Huang
et al. (2018); Tylewicz et al.

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(2018)
BELLRINGER1-like 5 Genetic grafting, confirmed Promotes tuberization in response to From leaves to stolons Banerjee et al. (2006, 2009)
(BEL5), mRNA with transgenic tag grafting inductive photoperiods
BEL11 and BEL29, Genetic grafting, confirmed Suppress tuber growth in response to From leaves to stolons Ghate et al. (2017)
mRNAs with transgenic tag grafting photoperiod by repressing target
genes of tuber-promoting BEL1-like
genes
CLE25, small peptide Genetic grafting Promotes rapid drought stress signaling, From root to leaves Takahashi et al. (2018)
by triggering ABA-induced stomatal
closure in leaves
ELONGATED Combination of techniques, Promotes nitrogen uptake and light- From shoot to root Chen et al. (2016)
HYPOCOTYL5 including genetic grafting and dependent carbon/nitrogen
(HY5), protein mobile environmental signal homeostasis
grafting, confirmed with
transgenic tag grafting
C-TERMINALLY Genetic grafting Promote nitrogen foraging From root to shoot Tabata et al. (2014)
ENCODED PEPTIDE
(CEP), small
peptides
CEP DOWNSTREAM Genetic grafting, confirmed Promotes nitrogen uptake by inducing From shoot to root Ohkubo et al. (2017)
(CEPD), small with transgenic tag grafting expression of NRT2.1 nitrate
peptide transporter in roots
Cytokinin precursors, Genetic grafting Promote increased shoot apical From root to shoot apical Osugi et al. (2017); Landrein
small molecules meristem size and growth in response meristem et al. (2018)
to replete nitrogen availability
MicroRNA2111, Genetic grafting Promotes increased nodulation in From shoot to root Tsikou et al. (2018)
small RNA response to low nitrogen
concentrations
Mobile mRNAs Intertaxonomic grafting, Unknown, implicated in systemic Bidirectional movement Hannapel (2013); Thieme et al.
confirmed with transgenic tag nitrogen and phosphate responses from shoot to root and from (2015), Zhang et al. (2016)
grafting root to shoot
Mobile small RNAs Intertaxonomic grafting and Transcriptional gene silencing and post- Predominately from shoot to Yoo et al. (2004), Molnar et al.
Tansley insight

transgenic tag (reporter gene transcriptional gene silencing root, but some movement (2010), Lewsey et al. (2016)
silencing), confirmed with from root to shoot
genetic grafts

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roots are capable of complementing drought-induced responses root-to-shoot signals comes from previous work showing that
in cle25 scions by inducing the expression of NINE-CIS- cytokinins synthesized in the root are transported through the
EPOXYCAROTENOIDDIOXYGENASE3(NCED3),anessential xylem into the shoot, and serve a necessary function in regulating
enzyme in the ABA biosynthetic pathway in shoots, thus triggering shoot growth (Osugi et al., 2017).
stomatal closure. However, the extent to which CLE25 serves as a
necessary, endogenous mobile signal during drought responses
V. Interorganismal communication through mobile
remains unclear, as wild-type scions grafted onto cle25 rootstocks
miRNAs
phenocopy wild-type self-grafts (Takahashi et al., 2018).
A balance between whole-plant carbon (C) fixation and N Plants engage in symbiotic and parasitic interactions through
uptake requires communication between photosynthetic leaves and coordinated interorganismal communication. Two recent studies
N-acquiring roots. In an Arabidopsis mutant screen, elongated used grafting to uncover miRNAs that participate in this commu-
hypocotyl5 (hy5) lines were found to be lacking in shoot-illuminated nication system during symbiotic plant–microbe and pathogenic
root growth (Chen et al., 2016). HY5 is a light-induced transcrip- plant–parasite interactions (Shahid et al., 2018; Tsikou et al.,
tion factor that is necessary for root-induced expression of the high- 2018). Members of the legume family participate in tight symbiotic
affinity nitrate transporter NRT2.1. By grafting mobile and associations with N-fixing rhizobia through the formation of
immobilized versions of HY5-expressing shoots onto hy5 roots, specialized root-derived nodules. Until recently, it was assumed
Chen et al. (2016) showed that shoot-to-root mobility of the HY5 that nodules were exclusively induced by rhizobial infection. New
protein is necessary to restore shoot-illuminated root growth via the work using plant grafting demonstrates that plants maintain
direct, sucrose-dependent upregulation of NRT2.1 (Fig. 2a,b). internal regulation over their competency to nodulate through the
Taken together, these findings support a role for shoot-mobile HY5 shoot-to-root transit of miR2111, which targets and directs post-
in the homeostatic regulation of C and N balance throughout the transcriptional suppression of TOO MUCH LOVE, a negative
plant (Chen et al., 2016). regulator of rhizobial symbiosis (Tsikou et al., 2018).
Root systems exhibit plasticity in response to heterogeneous Plant parasites form ‘haustoria’ with their hosts, through which
N environments (Ruffel et al., 2011). The transit of small xylem and, in a subset of parasites, phloem connections bridge the
C-TERMINALLY ENCODED PEPTIDE (CEP) and CEP two species. In addition to the transfer of nutrients and photosyn-
DOWNSTREAM (CEPD) peptides from root to shoot and shoot thates, RNA sequencing of Cuscuta, a parasite that connects to both
to root, respectively, serve in the long-distance coordination of this xylem and phloem host vascular systems, revealed that thousands of
N-induced plasticity (Fig. 2a,c,d; Tabata et al., 2014; Ohkubo mRNAs move through the haustorium in a host-to-parasite
et al., 2017). Local N starvation in roots induces root-expressed direction (Kim et al., 2014). Small RNA sequencing of host–
CEP signals that travel through the xylem into the shoot where they parasite connections recently demonstrated that genetic material is
bind to LRR-RK (Leucine-rich repeat receptor kinase) CEP bidirectionally transferred across the haustorium, with parasite-
receptors (Tabata et al., 2014). In response to CEP perception, specific miRNAs traveling in reverse, from Cuscuta back into the
shoot-expressed CEPD peptides move through the phloem into the host. Several of these Cuscuta miRNAs trigger targeted degradation
root where they selectively activate NRT2.1 expression in nitrate- of host transcripts that have implicated functions in host defense
rich environments (Ohkubo et al., 2017). Split root nitrate supply (Shahid et al., 2018). Engineering miRNA-resistant transcripts
assays demonstrate that local nitrate availability rather than CEPD into economically important plants that are susceptible to Cuscuta
trafficking is responsible for selective activation of NRT2.1, which may offer a solution for creating parasite resistant crops.
occurs through an as-yet-unknown mechanism (Ohkubo et al.,
2017).
VI. Conclusion
Recent progress in our understanding of nitrate-induced shoot
plasticity has also been made through grafting. Genetic regula- Long-distance communication serves a pivotal role in vascular plant
tion of shoot apical meristem (SAM) size is relatively well success,enablingplantstocoordinatedevelopmentaltransitionswith
studied (reviewed in Galli & Gallavotti, 2016); however, the seasonal cues, maintain root–shoot balance under fluctuating
influence of nutrient availability on SAM size regulation is environments, and regulate interorganismal interactions. The
poorly understood. Recognizing that well-nourished Arabidopsis technologically simple application of plant grafting has facilitated a
grown with supplemental nitrate exhibits a significantly larger rapid expansion of what was once a short list of known long-distance
SAM size and higher growth rate, Landrein et al. (2018) set out signals. These newly discovered signals emanate from diverse classes
to identify the molecular signals that connect nutrient sensing in of molecules (mRNAs, small RNAs, proteins and small molecules),
the root with SAM regulation. The researchers identified providingdeeperinsightinto the molecularinteractionsthat underlie
mutants that are defective in early steps of cytokinin biosynthesis optimized organismal function (listed in Table 1). Grafting is widely
(isopentyl transferase3.5.7 and cyp735a1.2) that specifically used in both annual and perennial crop production (Warschefsky
desensitize the SAM to increased nitrate availability when they et al., 2016; Gaion et al., 2017). Future work that extends our
are grafted as rootstocks, but not as scions, indicating that knowledge of mobile signals regulating agriculturally relevant traits
cytokinin precursors relay nutrient information regarding nitrate (e.g. nutrient foraging, reliable flowering time, symbiotic interac-
status from roots to shoots (Landrein et al., 2018) (Fig. 2a,e). tions, and resistance to parasites) into commonly grafted crops
Additional support for a model involving cytokinins as mobile systems offers promising avenues for sustainable crop protection.

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Guan D, Yan B, Thieme C, Hua J, Zhu H, Boheler KR, Zhao Z, Kragler F, Xia Y,
Acknowledgements Zhang S. 2017. PlaMoM: a comprehensive database compiles plant mobile
macromolecules. Nucleic Acids Research 45: D1021–D1028.
We thank two anonymous reviewers for their helpful feedback. Hannapel DJ. 2013. Long-distance signaling via mobile RNAs. Signaling
Research in the Frank laboratory is supported through startup and communication in plants. In: Balusk F, ed. Long-distance systemic
funds from Cornell University’s College of Agriculture and Life signaling and communication in plants. Berlin/Heidelberg, Germany:
Science. HRT is supported through a graduate student teaching Springer, 53–70.
assistantship from Cornell University. Haywood V, Yu T-S, Huang N-C, Lucas WJ. 2005. Phloem long-distance
trafficking of GIBBERELLIC ACID-INSENSITIVE RNA regulates leaf
development. The Plant Journal 42: 49–68.
ORCID Huang N-C, Luo K-R, Yu T-S. 2018. Mobility of antiflorigen and PEBP mRNAs in
tomato-tobacco heterografts. Plant Physiology 178: 783–794.
Margaret H. Frank https://orcid.org/0000-0002-8269-8240 Jackson SD, Hong Y. 2012. Systemic movement of FT mRNA and a possible role in
Hannah R. Thomas https://orcid.org/0000-0001-5538-2331 floral induction. Frontiers in Plant Science 3: 127.
Jaeger KE, Wigge PA. 2007. FT protein acts as a long-range signal in Arabidopsis.
Current Biology 17: 1050–1054.
Kehr J, Kragler F. 2018. Long distance RNA movement. New Phytologist 218:
29–40.
References Kim G, LeBlanc ML, Wafula EK, dePamphilis CW, Westwood JH. 2014.
An H, Roussot C, Sua rez-Lopez P, Corbesier L, Vincent C, Pi~ neiro M, Hepworth Genomic-scale exchange of mRNA between a parasitic plant and its hosts. Science
S, Mouradov A, Justin S, Turnbull C et al. 2004. CONSTANS acts in the 345: 808–811.
phloem to regulate a systemic signal that induces photoperiodic flowering of Kim M, Canio W, Kessler S, Sinha N. 2001. Developmental changes due to long-
Arabidopsis. Development 131: 3615–3626. distance movement of a homeobox fusion transcript in tomato. Science 293: 287–
Banerjee AK, Chatterjee M, Yu Y, Suh S-G, Miller WA, Hannapel DJ. 2006. 289.
Dynamics of a mobile RNA of potato involved in a long-distance signaling Knott JE. 1934. Effect of a localized photoperiod on spinach. Proceedings of the
pathway. Plant Cell 18: 3443–3457. American Society for Horticultural Science 31: 152–154.
Banerjee AK, Lin T, Hannapel DJ. 2009. Untranslated regions of a mobile Landrein B, Formosa-Jordan P, Malivert A, Schuster C, Melnyk CW, Yang W,
transcript mediate RNA metabolism. Plant Physiology 151: 1831–1843. Turnbull C, Meyerowitz EM, Locke JCW, J€onsson H. 2018. Nitrate modulates
B€aurle I, Dean C. 2006. The timing of developmental transitions in plants. Cell 125: stem cell dynamics in Arabidopsis shoot meristems through cytokinins.
655–664. Proceedings of the National Academy of Sciences, USA 115: 1382–1387.
Bhogale S, Mahajan A, Natarajan B, Rajabhoj M, Thulasiram HV, Banerjee AK. Lee J-Y, Frank M. 2018. Plasmodesmata in phloem: different gateways for different
2013. miRNA156- a potential graft-transmissible microRNA that modulates cargoes. Current Opinion in Plant Biology 43: 119–124.
plant architecture and tuberization in potato (Solanum tuberosum ssp andigena). Lewsey MG, Hardcastle TJ, Melnyk CW, Molnar A, Valli A, Urich MA, Nery JR,
Plant Physiology 164: 1011–1027. Baulcombe DC, Ecker JR. 2016. Mobile small RNAs regulate genome-wide
Buhtz A, Springer F, Chappell L, Baulcombe DC, Kehr J. 2008. Identification and DNA methylation. Proceedings of the National Academy of Sciences, USA 113:
characterization of small RNAs from the phloem of Brassica napus. The Plant E801–E810.
Journal 53: 739–749. Li C, Gu M, Shi N, Zhang H, Yang X, Osman T, Liu Y, Wang H, Vatish M,
Calderwood A, Kopriva S, Morris RJ. 2016. Transcript abundance explains mRNA Jackson S et al. 2011. Mobile FT mRNA contributes to the systemic florigen
mobility data in Arabidopsis thaliana. Plant Cell 28: 610–615. signalling in floral induction. Science Reports 1: 73.
Cha€ılakhyan MK. 1937. Hormonal theory of plant development. Bulletin of the Li C, Zhang K, Zeng X, Jackson S, Zhou Y, Hong Y. 2009. A cis element within
Academy of Sciences of the U.S.S.R. 198. flowering locus T mRNA determines its mobility and facilitates trafficking of
Chen Q, Payyavula RS, Chen L, Zhang J, Zhang C, Turgeon R. 2018. heterologous viral RNA. Journal of Virology 83: 3540–3548.
FLOWERING LOCUS T mRNA is synthesized in specialized companion cells in Lin WY, Huang TK, Leong SJ, Chiou TJ. 2014. Long-distance call from
Arabidopsis and Maryland Mammoth tobacco leaf veins. Proceedings of the phosphate: systemic regulation of phosphate starvation responses. Journal of
National Academy of Sciences, USA 115: 2830–2835. Experimental Botany 65: 1817–1827.
Chen X, Yao Q, Gao X, Jiang C, Harberd NP, Fu X. 2016. Shoot-to-root mobile Liu L, Chen X. 2018. Intercellular and systemic trafficking of RNAs in plants.
transcription factor HY5 coordinates plant carbon and nitrogen acquisition. Nature Plants 4: 869–878.
Current Biology 26: 640–646. Lu K-J, Huang N-C, Liu Y-S, Lu C-A, Yu T-S. 2012. Long-distance movement of
Corbesier L, Vincent C, Jang S, Fornara F, Fan Q, Searle I, Giakountis A, Farrona Arabidopsis FLOWERING LOCUS T RNA participates in systemic floral
S, Gissot L, Turnbull C et al. 2007. FT protein movement contributes to long- regulation. RNA Biology 9: 653–662.
distance signaling in floral induction of Arabidopsis. Science 316: 1030–1033. Luo K-R, Huang N-C, Yu T-S. 2018. Selective targeting of mobile mRNAs to
Frank MH, Chitwood DH. 2016. Plant chimeras: the good, the bad, and the plasmodesmata for cell-to-cell movement. Plant Physiology 177: 604–614.
‘Bizzaria’. Developmental Biology 419: 41–53. Martin A, Adam H, Dıaz-Mendoza M, Zurczak M, Gonza lez-Schain ND, Sua rez-
Gaion LA, Braz LT, Carvalho RF. 2017. Grafting in vegetable crops: a great Lopez P. 2009. Graft-transmissible induction of potato tuberization by the
technique for agriculture. International Journal of Vegetable Science 24: microRNA miR172. Development 136: 2873–2881.
85–102. Martınez-Garcıa JF, Virgos-Soler A, Prat S. 2002. Control of photoperiod-
Galli M, Gallavotti A. 2016. Expanding the regulatory network for meristem size in regulated tuberization in potato by the Arabidopsis flowering-time gene
plants. Trends in Genetics 32: 372–383. CONSTANS. Proceedings of the National Academy of Sciences, USA 99:
Gaupels F, Buhtz A, Knauer T, Deshmukh S, Waller F, van Bel AJE, Kogel K-H, 15211–15216.
Kehr J. 2008. Adaptation of aphid stylectomy for analyses of proteins and mRNAs Mathieu J, Warthmann N, K€ uttner F, Schmid M. 2007. Export of FT protein from
in barley phloem sap. Journal of Experimental Botany 59: 3297–3306. phloem companion cells is sufficient for floral induction in Arabidopsis. Current
Ghate TH, Sharma P, Kondhare KR, Hannapel DJ, Banerjee AK. 2017. The Biology 17: 1055–1060.
mobile RNAs, StBEL11 and StBEL29, suppress growth of tubers in potato. Plant Melnyk CW, Meyerowitz EM. 2015. Plant grafting. Current Biology 25:
Molecular Biology 93: 563–578. R183–R188.
Gonza lez-Schain ND, Dıaz-Mendoza M, Zurczak M, Sua rez-Lopez P. 2012. Molnar A, Melnyk CW, Bassett A, Hardcastle TJ, Dunn R, Baulcombe DC. 2010.
Potato CONSTANS is involved in photoperiodic tuberization in a graft- Small silencing RNAs in plants are mobile and direct epigenetic modification in
transmissible manner. The Plant Journal 70: 678–690. recipient cells. Science 328: 872–875.

Ó 2019 The Authors New Phytologist (2019)


New Phytologist Ó 2019 New Phytologist Trust www.newphytologist.com
New
8 Review Tansley insight Phytologist

Morris RJ. 2018. On the selectivity, specificity and signalling potential of the long- Takada S, Goto K. 2003. TERMINAL FLOWER2, an Arabidopsis homolog of
distance movement of messenger RNA. Current Opinion in Plant Biology 43: 1–7. HETEROCHROMATIN PROTEIN1, counteracts the activation of
Mudge K, Janick J, Scofield S, Goldschmidt EE. 2009. A history of grafting. FLOWERING LOCUS T by CONSTANS in the vascular tissues of leaves to
Horticultural Reviews 35: 437–493. regulate flowering time. Plant Cell 15: 2856–2865.
Navarro C, Abelenda JA, Cruz-Oro E, Cuellar CA, Tamaki S, Silva J, Shimamoto Takahashi F, Suzuki T, Osakabe Y, Betsuyaku S, Kondo Y, Dohmae N,
K, Prat S. 2011. Control of flowering and storage organ formation in potato by Fukuda H, Yamaguchi-Shinozaki K, Shinozaki K. 2018. A small peptide
FLOWERING LOCUS T. Nature 478: 119–122. modulates stomatal control via abscisic acid in long-distance signalling.
Ohkubo Y, Tanaka M, Tabata R, Ogawa-Ohnishi M, Matsubayashi Y. 2017. Nature 556: 235–238.
Shoot-to-root mobile polypeptides involved in systemic regulation of nitrogen Teo C-J, Takahashi K, Shimizu K, Shimamoto K, Taoka K-I. 2016. Potato tuber
acquisition. Nature Plants 3: 143. induction is regulated by interactions between components of a tuberigen
Osugi A, Kojima M, Takebayashi Y, Ueda N, Kiba T, Sakakibara H. 2017. complex. Plant and Cell Physiology 26: pcw197.
Systemic transport of trans-Zeatin and its precursor have differing roles in Thieme CJ, Rojas-Triana M, Stecyk E, Schudoma C, Zhang W, Yang L,
Arabidopsis shoots. Nature Plants 3: 17112. Mi~nambres M, Walther D, Schulze WX, Paz-Ares J, Scheible W-R, Kragler F.
Roelfsema MRG, Levchenko V, Hedrich R. 2004. ABA depolarizes guard cells in 2015. Endogenous Arabidopsis messenger RNAs transported to distant tissues.
intact plants, through a transient activation of R- and S-type anion channels. The Nature Plants 1: 15025.
Plant Journal 37: 578–588. Tilney-Bassett RAE. 1986. Plant Chimeras. London, UK: Edward Arnold
Rossant J, Spence A. 1998. Chimeras and mosaics in mouse mutant analysis. Trends Publishers.
in Genetics 14: 358–363. Tsikou D, Yan Z, Holt DB, Abel NB, Reid DE, Madsen LH, Bhasin H, Sexauer M,
Ruffel S, Krouk G, Ristova D, Shasha D, Birnbaum KD, Coruzzi GM. 2011. Stougaard J, Markmann K. 2018. Systemic control of legume susceptibility to
Nitrogen economics of root foraging: transitive closure of the nitrate-cytokinin rhizobial infection by a mobile microRNA. Science 362: 233–236.
relay and distinct systemic signaling for N supply vs. demand. Proceedings of the Tylewicz S, Petterle A, Marttila S, Miskolczi P, Azeez A, Singh RK, Immanen J,
National Academy of Sciences, USA 108: 18524–18529. M€ahler N, Hvidsten TR, Eklund DM et al. 2018. Photoperiodic control of
Shahid S, Kim G, Johnson NR, Wafula E, Wang F, Coruh C, Bernal-Galeano V, seasonal growth is mediated by ABA acting on cell-cell communication. Science
Phifer T, dePamphilis CW, Westwood JH et al. 2018. MicroRNAs from the 360: eaan8576–215.
parasitic plant Cuscuta campestris target host messenger RNAs. Nature 553: Warschefsky EJ, Klein LL, Frank MH, Chitwood DH, Londo JP, von Wettberg
82–85. EJB, Miller AJ. 2016. Rootstocks: diversity, domestication, and impacts on shoot
Spiegelman Z, Ham B-K, Zhang Z, Toal TW, Brady SM, Zheng Y, Fei Z, Lucas phenotypes. Trends in Plant Science 21: 418–437.
WJ, Wolf S. 2015. A tomato phloem-mobile protein regulates the shoot-to-root Yoo B-C, Kragler F, Varkonyi-Gasic E, Haywood V, Archer-Evans S, Lee YM,
ratio by mediating the auxin response in distant organs. The Plant Journal 83: Lough TJ, Lucas WJ. 2004. A systemic small RNA signaling system in plants.
853–863. Plant Cell 16: 1979–2000.
Tabata R, Sumida K, Yoshii T, Ohyama K, Shinohara H, Matsubayashi Y. 2014. Zhang Z, Zheng Y, Ham B-K, Chen J, Yoshida A, Kochian LV, Fei Z, Lucas WJ.
Perception of root-derived peptides by shoot LRR-RKs mediates systemic N- 2016. Vascular-mediated signalling involved in early phosphate stress response in
demand signaling. Science 346: 343–346. plants. Nature Plants 2: 16033.

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