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OPTICAL MINERALOGY
J. Nicholls
Department of Geology and Geophysics
University of Calgary
Calgary, Canada
Chapter 1: Background to the Text
Optical crystallography and mineralogy are difficult subjects to master. Yet, they
are fundamental to the description and identification of minerals and rocks with a
microscope. In addition to their practical use, optical mineralogy and crystallography
contain as complete and logical part of science as any other subjects in geology.
Consequently, mastery of the subject is also intellectually satisfying. The objective of this
text is to present much of the optical theory used by petrologists in the language of vector
algebra and vector calculus. Vectors are mathematical concepts that some people find
particularly easy to visualize. Perhaps one of the more difficult aspects of optical
crystallography is the visualization of the three dimensional nature of the optical
properties of crystals. The description of these properties with vector algebra provides an
alternative to the word descriptions and perspective drawings commonly used to display
optical properties and can enhance your skill in visualizing the three dimensional aspects
of optical crystallography. Because vectors are mathematical concepts, they also provide
a mechanism for obtaining numerically more precise and accurate descriptions of the
geometry of optical properties than can be had with word descriptions and drawings. A
mastery of the description of optical properties by vector algebra has a practical use. It
will give you, the practitioner, the ability to construct determinative charts and diagrams
relating optical properties to crystallographic and chemical properties that suit your
purposes rather than having to rely on charts and diagrams in the literature that were
perhaps constructed for some other purpose. In the event that new optical data become
available, you will be able to easily revise such charts and diagrams to take advantage of
the new data.
The use of optical properties to estimate mineral compositions has been largely
replaced, at the research level, by electron microprobe techniques. The study of the
crystallographic properties of minerals is now almost the exclusive domain of the x-ray
crystallographer and electron microscopist. These factors have caused a decline in the
importance of optical methods in mineralogy and crystallography. Yet, for the
petrologist, optical techniques remain the prime methods for mineral identification,
textural description, and zoning determination. Vectors can be used to efficiently
2
Chapter 1: Background to the Notes
represent the optical properties of crystals in forms that are easy to manipulate.
Consequently, the techniques by which we study rocks with the microscope are
enhanced. Vector descriptions of the optical properties of several rock-forming mineral
groups, notably olivines, pyroxenes, feldspars, and amphiboles, are included in the text.
It is assumed that you, the reader, are conversant with the theory and practice of
optical crystallography, such as covered in Bloss (1961) or Nesse (1991) and can plot
optical properties on stereographic projections and obtain quantitative data from such
projections (e.g. extinction angles). In general, anything that can be plotted and estimated
on a stereonet can be formulated into equations and more precisely calculated with a
computer. In essence, the purpose of this text is to explain how to make such calculations.
3
Chapter 1: Background to the Notes
Most of the mathematics needed to understand this text are discussed in high
school and introductory university level textbooks. You should know what a vector is and
how to represent it in terms of components. You should know how to multiply vectors
and the kinds of products that result: the dot and cross products. You will also need to
know how to solve three simultaneous linear equations and how to manipulate
trigonometric functions. In a couple of instances, use is made of more advanced
techniques involving calculus and statistics such as taught in university level math
courses. Hopefully, these parts have been written in such a way that the problem can be
understood and the concepts underlying its solution followed even if the details and
mechanics of the solution are not part of your background. A review of vector algebra
and the specific features of the calculus used in the text are given in the Appendix.
Several texts that are repeatedly cited; these amplify many parts of the subject and
are recommended as sources of additional information and as review of topics needed as
background. Optical theory is covered in Bloss (1961) and Nesse (1991), crystallography
is covered in Bloss (1971) and spindle stage theory and practice is covered in Bloss
(1981). The texts by Nye (1957) and Lovett (1991) discuss the applications of tensors to
describe the physical properties of crystals and the transformation of coordinates from
one reference frame to another. Hoffmann (1975) discusses vectors and their meaning.
4
Chapter 2: Vector Representation of the Indicatrix
Introduction
In this chapter we will derive the equations that relate optical directions within the
indicatrix. The important directions are the principal vibration directions, X, Y, Z, the
optic axes and, in any given section through the indicatrix, the two vibration directions of
light and the wave normal associated with the two vibration directions in the plane of the
section. The material will be organized in the following manner. First, we will use the
Law of Biot-Fresnel to relate the vibration directions in a section cut through a biaxial
crystal to the wave normal associated with these directions. In orthoscopic light the
normal to our thin section is also parallel to the wave normal. Second, we will derive an
equation relating vibration directions in random thin sections to vectors parallel to the
optic axes. If the need should arise, this exercise provides us with the means for locating
the optic axes from extinction angle measurements. Third, we will discuss calculation of
the refractive indices and birefringence of a random section through the indicatrix. We
will end the chapter with a discussion of the need for consistency between the principal
refractive indices and 2V and how this consistency can be obtained from measurements of
the optical properties of crystals.
The names of the vectors and other quantities associated with the optical
properties of biaxial crystals used in this chapter are listed in Table 2-1 for reference.
Quantities of a mathematical nature are described or defined in the Appendix.
5
Chapter 2: Vector Representation of the Indicatrix
the optic axes (see Bloss, 1961, Fig. 9-9A, p. 163). To apply this law, the locations of the
wave normal and the optic axes in a frame of reference are required. The indicatrix
provides a convenient frame of reference for the location of vectors representing optical
directions.
Construct the circular sections, CS1 and CS2, normal to OA1 and OA2,
respectively. The projections of the diameters of the circular sections of the indicatrix
intersect the primitive circle of the projection along the lines a-b and c-d, Figure 2-1. The
wave normal is plotted at the pole of the primitive circle; consequently, the section
through the indicatrix, normal to w, lies in the plane of the projection. In general, this
section through the indicatrix will be an ellipse with major and minor axes equal to γ’ and
α’, respectively, where γ’ and α’ are the slow and fast indices of refraction in the section
through the crystal. Since the radii of the circular sections of the indicatrix are equal to β,
the four radii of the elliptical section along the lines a-b and c-d will also equal β. The
properties of an ellipse require that the bisectors of the angles between equal radii be
parallel to the semi-axes of the ellipse. Hence, these are the vibration directions
associated with the wave normal, w (see Bloss, 1961, p. 229. Fig. 11-9).
6
Chapter 2: Vector Representation of the Indicatrix
Construct the projections of the planes containing w and the optic axes (Dashed in
Figure 2-1). Measure the angles labeled θ. The law of Biot-Fresnel states that these
angles are equal.
If we know the direction of the wave normal, we can write down an equation for a
unit vector parallel to this direction:
w = w1i + w 2 j + w 3k (2.1)
where i, j, and k are unit vectors parallel to the axes of the indicatrix, X, Y, and Z,
respectively. The wi, i = 1, 2, 3, are the components of w parallel to X, Y, and Z, in that
order. Because the components of a unit vector are the same as the direction cosines of
7
Chapter 2: Vector Representation of the Indicatrix
the vector in the frame of reference, it is relatively simple to locate the wave normal
vector by the angles it makes with the axes of the frame of reference (Figure 2-2A).
A unit vector parallel to the optic axis that falls between positive X and positive Z
is given by:
u = u1 i + u 3 k (2.3)
where: u1 = sin Vz and u 3 = cos Vz. These vectors are illustrated on Figure 2-2B. The
second optic axis will be parallel to a unit vector:
Note that:
v = − u1 i + u 3 k (2.5)
We first want to calculate the components of the vectors parallel to the lines of
intersection. The cross product was designed to find such a vector as it produces a new
vector normal to two original ones. A vector parallel to the first intersection is:
T = u× w (2.6)
S = w×v (2.7)
Unit vectors parallel to the two lines of intersection are obtained by dividing by
the magnitudes of the T and S:
8
Chapter 2: Vector Representation of the Indicatrix
t=
(u × w ) (2.8)
( u × w )<( u × w )
s=
(w × v ) (2.9)
( w × v )<( w × v )
Substitution of Equations (2.3) and (2.5) into Equations (2.8) and (2.9), plus the
fact that the sum of squares of a set of direction cosines is one, provides after a bit of
algebraic manipulation:
u3 w2 i + (u3 w1 + u1 w3 ) j + u1 w2 k
s= (2.11)
1- (u1w1 − u3 w3 )
2
Notice here that Equations (2.10) and (2.11) are formulae for calculation. The wi
are given quantities and the ui can be calculated from 2Vz [Equations (2.2) and (2.4)].
Consequently, t and s can be calculated.
According to the Law of Biot-Fresnel, one of the vibration directions in the plane
of the thin section bisects the angle between t and s, labeled 2θ on Figure 2-3. The value
of this angle can be calculated by using the dot product of t and s:
Note that t and s have magnitudes of one. Consequently, the product of their
magnitudes is also unity and does not appear explicitly in Equation (2.12). Solving for
sin θ gives:
sin θ = 1
2 (1 − t < s ) (2.13)
We can now find θ easily with the Arcsin function. Our next task is to find a unit
vector parallel to the bisector of the angle 2θ. This unit vector will be normal to w, hence
the bisector is related to t, s, and w by:
9
Chapter 2: Vector Representation of the Indicatrix
n × t = − sin θ w (2.14)
n<t = cos θ (2.15)
n × s = sin θ w (2.16)
n< s = cos θ (2.17)
Either pair of Equations (2.14) and (2.15) or (2.16) and (2.17) are sufficient to
locate n. The details of calculating a vector, such as n, given two other unit vectors and
the angle between n and t are described in The Appendix (Solution of the Product
Equations). In short, we can calculate the components of one vibration direction, n, using
either the pair of Equations (2.14) and (2.15) or the pair (2.16) and (2.17). The minus sign
is required in Equation (2.14) in order for the triple of vectors, n, t, and: -w to form a right
hand set.
As an alternative to the sets of Equations (2.14) and (2.15) or (2.16) and (2.17), n
can be calculated in the following fashion. Because n bisects the angle between t and s
and because t and s are of equal magnitude, remember they are unit vectors, the
parallelogram law of vector addition requires that:
G=t+s (2.18)
where G is a vector parallel to n. It is then a simple matter to convert G into a unit vector
by dividing by the square root of the dot product of G with itself:
G
n= (2.19)
G •G
To find the second vibration direction, we note that it is normal to both w and n.
As a result they are simply related by the cross product:
m = n× w (2.20)
m1 n2 w3 − n3 w2
m = n w − n w (2.21)
2 2 1 1 3
m3 n1w2 − n2 w1
10
Chapter 2: Vector Representation of the Indicatrix
The foregoing contains the information we need to find the vibration directions in
any section through a biaxial mineral if we are given the wave normal vector, w, 2V and
optic sign. In fact, all we need to calculate the vibration directions for a given wave
normal defined in the frame of reference describing the indicatrix are the indices of
refraction. 2V can be calculated from the indices of refraction. An example of the
calculations is given in Table 2-2.
α β γ
Indices of Refraction 1.60 1.62 1.70
Calculated Values
Vz [see Bloss 1961, p. 156; Equation (44)] 27.618
i j k
Optic Axis Vector: u 0.46357 0.0 0.88606
Optic Axis Vector: v -0.46357 0.0 0.88606
11
Chapter 2: Vector Representation of the Indicatrix
We can write Equations (2.8) and (2.9) in the following way by manipulating the
vectors under the radical:
(u × w ) (2.22)
t=
1 − (u • w )
2
(w × v ) (2.23)
s=
1 − (v • w )
2
Next we substitute these two equations into Equations (2.14) and (2.16) and
equate the terms in sin θ w:
n × (w × v ) n × (u × w )
= (2.24)
1 − (v • w ) 1 − (u • w )
2 2
Notice that we can remove the negative sign from Equation (2.14) by reversing the order
of w and u in the cross product. There is a vector identity that can be used to expand the
vector triple products in the following manner (Hoffmann, 1975, p. 80):
w (n • v ) − v ( n • w ) w (n • u ) − u ( n • w )
= (2.25)
1 - (v • w ) 1 − (u • w )
2 2
But because n and w are normal vectors, the angle between them is 90°. As a result the
cosine of the angle between them is zero causing their dot product to be zero.
Consequently, Equation (2.25) simplifies to:
n•v n•u
w − =0 (2.26)
1 - (v • w )2 1 - (u • w )
2
The wave normal has a definite direction that cannot be represented by a zero vector;
therefore, Equation (2.26) can equal zero only if the scalar coefficient of w (i.e. the term
in square brackets) is zero. Setting this term equal to zero and squaring gives:
(n • v ) 1 − ( u • w )2 − ( n • u )2 1 − ( u • w )2 = 0
2
(2.27)
12
Chapter 2: Vector Representation of the Indicatrix
The significance of Equation (2.27) lies in the fact that it tells us we must
determine the vibration directions in at least four randomly chosen sections if we want to
find vectors parallel to the optic axes by extinction angle measurements, a fact first
discovered by Weber (1921). Further, the vibration directions located by positions of
extinction, must all refer to a common coordinate system. This can be done by mounting
the crystal on a rotational device such as a spindle stage (Bloss, 1981) or, much less
accurately, a universal stage (Slemmons, 1962). If we have vector representations of
more than four different extinction positions, we can use the method of least squares (see
The Appendix) to calculate the components of the optic axial vectors, u and v, that best
agree with all the data.
Equation (2.27) also tells us that in thin section, the extinction position of a
randomly chosen section only gives us 25% of the information we need to locate the optic
axes. Even if we change to conoscopic illumination and look at an interference figure,
just any old section will not allow us to locate the optic axis, determine the sign or
possibly even establish whether the crystal is biaxial. The point to remember is that we
have been discussing arbitrarily chosen sections and that the secret to optical mineralogy
is to decrease the arbitrariness. You can do this by searching for grains with low
interference colors and that, ideally, remain at extinction on rotation of the stage. These
sections are not chosen at arbitrarily and will give approximately centered optic axis
figures. In this instance, we can locate optic axes with just one section, not four (see,
however, page 19).
13
Chapter 2: Vector Representation of the Indicatrix
w1 = 0
w2 = sin S (2.28)
w3 = cos S
14
Chapter 2: Vector Representation of the Indicatrix
g1 = 0
g2 = cos S
g3 = sin S
The components of n are now easily calculated from the two criteria:
n × g = w sin (π 2 − E ) = w cos E
(2.30)
n12 + n22 + n32 = 1
The results give the components of n in the spindle stage reference system:
n1 = cos E
n2 = sin E cos S (2.31)
n3 = sin E sin S
The components of n are calculated for each pair of E and S angles measured with the
spindle stage.
The components of each resulting n are entered into Equation (2.27). This
provides a number of simultaneous equations that can be solved, by least squares
techniques, for the components of u and v in the spindle stage reference frame.
Unfortunately, Equation (2.27) is nonlinear in these unknowns, the optic axial vectors,
and standard linear least-squares techniques cannot be used. Nonlinear least-squares
methods, such as described by Meyer (1975) are required instead. The essence of these
procedures is to find a first approximate location for u and v from a stereographic
projection of the extinction angle data (see Bloss, 1981 for details). Next, Equation (2.27)
is evaluated at each extinction position by entering the components of n, u, and v, the
latter obtained from the stereographic projection. New positions of u and v are calculated
by nonlinear least-squares methods and the exercise of evaluating Equation (2.27) is
repeated, using the new values of u and v. Iteration continues until the corrections to u
and v are smaller than some small number.
If all goes well, the nonlinear least-squares procedure produces the best values for
u and v. Their dot product immediately gives 2V:
u • v = cos 2V (2.32)
15
Chapter 2: Vector Representation of the Indicatrix
The location of the unit vector parallel to the y-axis, j, in the spindle stage reference
frame, is easily found with the cross product:
A second application of the cross product, in conjunction with the dot product (Appendix,
Solution of the Product Equations) serves to define a unit vector, e, parallel to the acute
bisectrix:
e × v = sin Vj
(2.34)
e • v = cos V
Finally, we can once more apply the cross product and calculate the unit vector, f, parallel
to the obtuse bisectrix:
e× j = f (2.35)
We cannot assign the labels i and k, as defined earlier, to e and f unless we know
the sign of the crystal. If the crystal is positive then e equals k and f equals i. Otherwise
the reverse is true. The locations of j, e and f, as calculated above, are with respect to the
spindle stage reference axes. To convert u and v to the indicatrix reference frame, we
return to Equations (2.2) and (2.4).
A vector parallel to the vibration vector that stretches from the center of the
indicatrix to a point (X,Y,Z) on the indicatrix is given by:
16
Chapter 2: Vector Representation of the Indicatrix
N = Nn (2.36)
where N is a scalar that multiplies n and gives the magnitude of N. From the definition of
the indicatrix we conclude that its value is equal to the refractive index of the light
vibrating parallel to n. In component form we have:
Equating components and substituting the results into the equation for the indicatrix:
( α) ( β ) ( γ ) =1
2 2 2
X + Y + Z (2.38)
gives:
2 2 2
Nn1 Nn2 Nn3
+ + =1 (2.39)
α β γ
Hence:
αβγ
N= (2.40)
( βγ n1 ) + (αγ n2 ) + (αβ n3 )
2 2 2
17
Chapter 2: Vector Representation of the Indicatrix
form:
1 1 1 1
n12 2 + n22 2 + n32 2 = 2 (2.41)
α β γ N
The resulting system of equations can be solved for the principal refractive indices, α, β,
and γ.
If more than three refractive indices are measured, the system of equations will be
over determined and the principal refractive indices can be determined by least-squares
analysis. In contrast to the least squares estimation of optic axis vectors, the actual least
squares calculation of the principal refractive indices is linear in 1 α 2 , 1 β 2 , and 1 γ 2 .
Before the least squares analysis can be done, the reference frames assigned to the
indicatrix and the spindle stage must be related. The components of the vibration vectors
that appear in Equation (2.37) are those in the indicatrix reference frame. However, the
vectors are measured in the spindle stage reference frame. The equations needed to
transform the components of a vector from one reference frame to another are given by
Nye (1957, p. 9-10) [See also, The Appendix, Transformation of Vector Components]. If
a point in the indicatrix frame of reference is represented by the numbers (X,Y,Z) and the
same point in the spindle stage frame of reference is represented by (x,y,z) then the two
sets of numbers are related by:
where aij , j = 1, 2, 3, are the direction cosines of the X vibration direction in the spindle
stage frame of reference. The a2 j and a3 j are the analogous direction cosines for Y and Z,
18
Chapter 2: Vector Representation of the Indicatrix
where ni* , i = 1, 2,3, are the components of n in the spindle stage frame of reference and
19
Chapter 2: Vector Representation of the Indicatrix
α 2 (γ 2 − β 2 )
cos 2 Vz = (2.44)
β 2 (γ 2 − α 2 )
Because of experimental errors, tabulated values of 2V and the principal refractive indices
seldom exactly satisfy Equation (2.44) and in some cases calculated and measured values
of 2V differ by several degrees. This is illustrated in Table 2-3 for some plagioclase data
compiled by Phillips and Griffen (1981).
It is worth noting that consistency is a necessary requirement for accurate data but
it is not a sufficient one. If data are inconsistent we know that some or all of them are not
correct. However, consistent data may also be inaccurate; they just agree among
themselves.
The mathematical device for doing this is called a Lagrange multiplier. The
technique of constrained minimization is outlined in The Appendix, (Constrained
Minimization and Lagrange Multipliers) and the theoretical development of the technique
is explained in many math texts (Thomas, 1968, p. 528; Kaplan, 1973, p. 184; Marsden
and Tromba, 1981, p. 217).
20
Chapter 2: Vector Representation of the Indicatrix
(2.45)
λ α 2 (γ 2 − β 2 ) − 12 β 2 (γ 2 − α 2 ) (1 + cos 2Vz )
where the primes indicate measured or tabulated values and λ is the Lagrange multiplier.
Note that the term in square brackets is derived from Equation (2.44) by using a double-
angle trigonometric formula. Equation (2.44) is the constraint on the minimization.
Carrying through the mathematical procedure provides the following set of equations:
{ }
α 1 + λ γ 2 − β 2 + 12 β 2 (1 + cos 2Vz ) − a ' = 0
{ }
β 1 − λ α 2 + 12 (γ 2 − α 2 ) (1 + cos 2Vz ) − β ' = 0
{ }
α 1 − λ α 2 − 12 β 2 (1 + cos 2Vz ) − γ ' = 0 (2.46)
α 2 (γ 2 − β 2 ) − 12 β 2 (γ 2 − α 2 ) (1 + cos 2Vz ) = 0
Equations (2.46) are a set of five equations in five unknowns, α, β, γ, 2Vz and λ,
that can be solved simultaneously. Unfortunately, the equations are nonlinear (i.e.
squares, higher powers and trigonometric functions of the unknowns are present in the
expressions) and their solution requires iteration techniques. As a result, their solution is
only feasible on a computer. Methods for achieving this are described by Burden, et al.
(1981, Chapter 9). The important point to remember is that we can, in theory and
practice, obtain consistent values of the optical parameters for entering into our
equations. The program, Optics.exe, used to calculate the optical properties in sections
through biaxial crystals contains a subroutine that ensures consistency of the primary
optical data, 2Vz, α, β, and γ.
Summary
We need the following data to locate the vibration directions in a random section
through a biaxial crystal: the direction cosines of the wave normal, w, 2V and the sign of
the crystal. The last two bits of data are equivalent to 2Vz. We first calculate the
components of u and v from Equations (2.2) and (2.4). Next we calculate the components
of t and s from Equations (2.8) and (2.9). Equation (2.13) is used to find sin θ. The
21
Chapter 2: Vector Representation of the Indicatrix
components of the first vibration vector are found by solving the pair of Equations (2.14)
and (2.15) or the pair (2.16) and (2.17). The components of the second vibration vector
are found by solving Equation (2.20). Next, we can calculate the refractive indices in a
particular section, N and M, with Equation (2.40) if we know the principal refractive
indices, α, β, and γ. The problem of locating the optic axes from extinction angles
illustrates the importance of removing the random element from optical observations. To
locate the optic axes from extinction angle measurements, data collected from at least
four different randomly chosen sections are needed unless the sections are special ones.
For example, optic axis or bisectrix sections are sufficient in themselves, but such
sections cannot be randomly chosen every time. Least squares methods can be applied to
extinction vector and refractive index data collected on a spindle stage. Best fit locations
of the optic axes and of the principal refractive indices can be extracted with these
methods. Theoretically consistent optical parameters can be objectively obtained from
optical measurements with constrained minimization using Lagrange multipliers.
Problems
1. The reported value of 2V for an orthopyroxene having a composition of En50 is 56°.
The sign of the mineral is negative. Calculate unit vectors along the optic axes. Use
the indicatrix as the primary frame of reference.
2. Jadeite has an extinction angle of Z^c = 40° in a section parallel to (010). In a
reference frame with the following unit vectors:
z parallel to the c-axis
y parallel to the b-axis
x perpendicular to (100)
22
Chapter 2: Vector Representation of the Indicatrix
23
Chapter 3: Optical Orientation of Biaxial Crystals
Introduction
Our objective in this chapter is to obtain equations that relate the indicatrix to the
crystal lattice; this relationship is called the optical orientation of the crystal. The reason
for specifying the optical orientation is that mineral identification, estimation of
compositions of solid solutions and characterization of structural states by optical
methods often depend on measuring an optical property in a particular section cut through
a crystal. This optical property, for example, could be an extinction angle to a cleavage
trace or it could be a refractive index in a plane identified by its crystallographic
orientation such as a plane parallel to the lattice plane (hkl). In order to measure the
optical property with respect to the crystallographic feature, the relationship between the
crystal’s lattice and its indicatrix must be known. The complexity of the relationship
depends on the crystal system; the lower the symmetry of the crystal system, the more
complex the relationship can be. What we have done so far towards specifying the optical
orientations is to find equations that describe directions in the indicatrix without any
attempt to take into account crystallographic directions. Because the optical properties are
our main concern, the indicatrix will remain our primary frame of reference. This means
that the unit vectors, i, j, k, will continue to be parallel to X, Y, and Z of the indicatrix. To
obtain the optical orientation for a crystal we will have to mesh two frames of reference,
the indicatrix and the crystal lattice. Ultimately we will have to find the components of
the crystallographic vectors along the indicatrix axes. Suppose we know a vector that is
described in terms of the crystallographic vectors, a, b, and c . For example:
where u, v, w, are the indices for a crystallographic direction, [uvw], and a, b, and c, are
vectors parallel to the unit cell edges. We want to write an expression for d in the
following form:
d = d1 i + d2 j + d3 k (3.2)
24
Chapter 3: Optical Orientation of Biaxial Crystals
where the di are the components of d along the axes of the indicatrix and d is a unit
vector. The vector d, described by Equation (3.1) need not be a unit vector. It is much
more convenient to mesh two frames of reference if both of them are right hand Cartesian
systems. Because monoclinic and triclinic lattices are not Cartesian, this convenience is
not immediately available. To obtain this convenience, we will find expressions for the
components of the unit cell vectors, a, b, c, along the axes of a secondary Cartesian
system that we will label with axes x, y, and z. The specification of the optical orientation
of a crystal will then be a matter of stating the relationship between the frame of
reference described by x, y, z and the frame of reference described by X, Y, and Z, the
indicatrix.
Orthorhombic Orientations
Symmetry requirements limit the variants on the optical orientation of
orthorhombic crystals to six. The principal vibration directions must parallel the
crystallographic axes (Nye, 1957, Chapter 13). Complications arise only when we label
the positive and negative ends of the axes. Otherwise the two frames of reference, the
indicatrix and the crystal lattice, coincide. In three of the six possible cases, the positive
end of an axis in one reference frame, say the indicatrix, must coincide with a negative
end of an axis in the other reference frame, the crystal lattice, in order to ensure that both
reference frames maintain right hand orientations. Only one axis in one reference frame
need be given a negative sign in order to maintain a right hand orientation; which axis we
choose to label with the negative sign is arbitrary. The details of the six orientations we
will use are given in Table 3-1; the scheme was chosen because of its apparent symmetry.
Note that apart from sign, the secondary frame of reference coincides with the primary
one.
25
Chapter 3: Optical Orientation of Biaxial Crystals
The concern for maintaining a right hand orientation in our frames of reference is
forced on us by the cross product. If we change the hand of our frame of reference, we
change the sign of the cross product (Hoffmann, 1975, p. 103). Because we use the cross
product in calculations in the indicatrix and, as we shall see, in the crystal lattice it makes
it worth our while to maintain right hand reference systems.
It remains to express the components of the unit cell vectors in terms of the
indicatrix unit vectors, i, j, and k. These are set down in Table 3-2 and illustrated on
Figure 3-1.
Table 3-2: Components of the unit cell vectors along the indicatrix axes for
the six optical orientations in orthorhombic crystals.
Unit Cell Indicatrix Unit Cell Indicatrix
Vector Components Vector Components
i j k i j k
a a 0 0 a -a 0 0
Case 1 b 0 b 0 Case 4 b 0 0 b
c 0 0 c c 0 c 0
a 0 a 0 a 0 -a 0
Case 2 b 0 0 b Case 5 b b 0 0
c c 0 0 c 0 0 c
a 0 0 a a 0 0 -a
Case 3 b b 0 0 Case 6 b 0 b 0
c 0 c 0 c c 0 0
Monoclinic Orientations
The symmetry of the monoclinic system requires that one principal vibration
direction coincide with the two-fold axis of symmetry (see Nye, 1957, chapter 13).
Mineralogists almost exclusively use the second setting for monoclinic crystals and thus
label the two-fold symmetry axis the b-axis (an exception is Smith, 1982, Chapter 4). In
conformity with nearly everyone, we will also label the symmetry axis the b-axis. The
most common optical orientation in minerals is shown in Figure 3-2 where Y is parallel
to the b-axis. To complete the specification of an optical orientation in monoclinic
crystals, an extinction angle in (010) must be given. For the first case illustrated on
Figure 3-2, with Y parallel to b, the extinction angle we will recognize is between Z and
the c-axis of the crystal. By convention, this extinction angle, labeled θ on Figure 3-2,
will be assigned a positive sign if Z lies in the obtuse angle, β°, between the positive a-
26
Chapter 3: Optical Orientation of Biaxial Crystals
axis and the positive c-axis and is less than 90°. Consequently, the extinction angle will
lie in the range: − π2 ≤ θ ≤ π2 . The convention regarding the sign of the extinction angle, θ,
in (010) is not consistent in the literature. Bloss (1961, p. 227), for example, describes the
extinction angle as we do here. Phillips and Griffen (1981), on the other hand, assign a
negative value where we use a positive one.
The other two orientations, X parallel to the b-axis and Z parallel to the b-axis, are
also illustrated on Figure 3-2. The extinction angles in (010), labeled θ in Figure 3-2, are
measured positive if the appropriate principal vibration direction lies in the interaxial
angle, β°. Again, we have ensured the frames of reference maintain right hand
orientations, this time by the appropriate definition of the extinction angles.
b = bj (3.3)
We can use the following systematic procedure to find the components of a and c.
First, from the sketch on Figure 3-2, we note that the following product equations are
valid:
c • k = c cos θ (3.4)
c × k = c sin θ j (3.5)
c • k = c3 (3.6)
c × k = c2 i − c1 j (3.7)
Equation (3.7) can be derived from the expansion of the cross product as a determinant
(see The Appendix). Equating components in Equations (3.4) and (3.6) with the like
components of Equations (3.5) and (3.7) provides the expressions for the components of
c:
27
Chapter 3: Optical Orientation of Biaxial Crystals
c1 = − c sin θ (3.8)
c2 = 0 (3.9)
c3 = c cos θ (3.10)
Using these components, the equation for c in the indicatrix frame of reference becomes:
c • a = ac cos β , (3.12)
c × a = ac sin β , j (3.13)
we can substitute the components of c from Equations (3.8)-(3.10) and arrive at the
following result after some algebra with trigonometric identities:
These results and the representation of the monoclinic lattice vectors in the other two
monoclinic frames of reference are set down in Table 3-3.
Table 3-3: Components of the lattice vectors along the indicatrix axes for
the three possible monoclinic optical orientations. The extinction angle in
(010), θ , is positive if the indicated principal vibration direction lies in the
interaxial angle, β , .
Case 1: Y & b Case 2: X & b
a = a sin ( β , − θ ) i + cos ( β , − θ ) k a = a cos ( β , − θ ) j + sin ( β , − θ ) k
b = bj b = bi
c = c [− sin θ i + cos θ k ] c = c [cosθ j − sin θ k ]
θ = k^c θ = j^c
Case 3: Z & b
a = a cos ( β , − θ ) i + sin ( β , − θ ) j
b = bk
c = c [cosθ i − sin θ j ]
θ = i^c
28
Chapter 3: Optical Orientation of Biaxial Crystals
a = ax x + a y y + az z (3.15)
Second, we will relate the xyz frame of reference to the frame of reference defined by the
indicatrix. This will result in our being able to express each of the unit vectors, x, y, z, in
terms of the unit vectors along the primary frame of reference, i, j, k. For example, the
unit vector along the x-axis will be expressed in an equation of the form:
where the components of x will consist of trigonometric functions of the three Euler
angles. We can then substitute Equation (3.16) and two more like it, one for y and one for
z, into Equation (3.15). On doing so we will have specified the lattice vector, a, in terms
of components along the indicatrix axes. If we do the same thing for b and c, then we will
have specified the optical orientation of the triclinic crystal.
The choice of the xyz frame of reference is arbitrary and limited only by the
29
Chapter 3: Optical Orientation of Biaxial Crystals
x = [001]
y = Normal to [001] in (010)
z = Normal to (010)
With this choice of labels, we have a right hand frame of reference and can see
immediately that:
c = cx (3.17)
The a-axis lies in the (010) plane and, by definition, lies in the x-y plane of our coordinate
system. Hence, a has no component along the z-axis which is normal to (010). The lattice
vectors, a and c, are related by:
c • a = ac cos β , (3.18)
c × a = ac sin β , z (3.19)
Expanding the products in terms of components along the xyz axes and equating like
components in the same way we treated vectors in the monoclinic cases gives:
In order to find the components of b along the axes of the xyz frame of reference, we can
use the following equations, treating the components of b as unknowns:
30
Chapter 3: Optical Orientation of Biaxial Crystals
b • c = bc cos α , (3.21)
a • b = ab cos γ , (3.22)
b • b = b2 (3.23)
Solving for the components of b by substituting the components of a and c calculated
above, we finally arrive at the expression for b in terms of components along the xyz
frame of reference:
Equations (3.17), (3.20) and (3.24) complete the first half of our program of
writing equations for the lattice vectors in terms of components along the indicatrix axes.
What remains is to relate the unit vectors, x, y, z, to the indicatrix axes.
x • i = cos Θ (3.25)
That is, Θ is the angle between the positive ends of the x-axis and the X-axis. Next we
can define a vector by:
E = x × i = sin Θe (3.26)
31
Chapter 3: Optical Orientation of Biaxial Crystals
Note that the magnitude of E is sin Θ. The vector E is parallel to the line of intersection
of the Y-Z and y-z planes of the two coordinate systems. Bloss (1981) refers to this line
as the nodal line. We will in like fashion call E the nodal vector. Being a vector, E has a
definite direction and is not the same vector as that produced by reversing x and i in
Equation (3.26) nor is it equal to the vector produced by replacing Θ by: -Θ.
Consequently Θ is positive if measured in a counter clockwise direction from x towards
X.
y × E = E sin Φx (3.27)
Substitution of the magnitude of E from Equation (3.26) into Equation (3.27) gives:
The cross product is used to define Φ because a sign is given to the angle. Φ is positive
when measured in a counter clockwise direction from y (see Figure 3-3).
or:
or:
32
Chapter 3: Optical Orientation of Biaxial Crystals
Equations (3.26)-(3.33) are the raw material for constructing the components of the unit
vectors, x, y, z, along the axes of the indicatrix. First, substitute x × i for E in Equations
(3.29) and (3.31) and use the vector identity (Hoffmann, 1975, p. 80):
A × (B × C ) = ( A • C ) B − ( A • B ) C (3.34)
to get:
and:
Because the dot product of a pair of normal vectors is zero, the last terms before the equal
signs in Equations (3.35) and (3.36) vanish. Writing x in component form, taking the
indicated dot products and equating the coefficients of i in the last two equations gives:
x1 = cos Θ (3.39)
and:
33
Chapter 3: Optical Orientation of Biaxial Crystals
The solutions of the last four equations for the components of y and z involve a
considerable amount of algebra and the details are left as exercises. The results are
included in the complete set of equations for specifying the optical orientation of triclinic
crystals set down in Table 3-4.
Table 3-4: Equations for representing the lattice vectors of triclinic crystals
in the frame of reference defined by the indicatrix. As an intermediate step,
the lattice vectors are represented by components in a frame of reference
with the x-axis parallel to [001], the y-axis normal to [001] in the plane (010)
and the z-axis normal to (010). Equations of the unit vectors along the xyz
axes as functions of the Euler angles complete the specification.
Lattice Vectors in the xyz Frame of Reference
a = a cos β , x + sin β , y
cos γ , − cos α , cos β ,
b = b cos α , x + b y+
sin β ,
1 − cos 2 α , − cos2 β , − cos2 γ , + 2 cos α , cos β , cos γ ,
b z
sin 2 β ,
c = cx
Unit Vectors Along the xyz Axes in the Indicatrix Reference Frame
x = cos Θi + sin Θ sin Ψj + sin Θ cos Ψk
y = sin Θ sin Φ i + (cos Φ cos Ψ − cos Θ sin Φ sin Ψ ) j -
(cos Φ sin Ψ + cos Θ sin Φ cos Ψ ) k
z = − sin Θ cos Φi + (sin Φ cos Ψ + cos Θ cos Φ sin Ψ ) j -
(sin Φ sin Ψ + cos Θ cos Φ cos Ψ ) k
34
Chapter 3: Optical Orientation of Biaxial Crystals
faces) can be determined with a combination of spindle stage and x-ray powder
diffraction data. Specifically, we need to know the unit cell constants and the locations, in
the spindle stage reference frame, of the poles to two lattice planes. Because the Euler
angles we use to describe the optical orientation of triclinic crystals refer to a reference
frame parallel to three important twin axes in feldspars, feldspars are a convenient
mineral group on which to demonstrate the method. Equations for a more general case are
given subsequently.
Given the sign of the mineral, spindle stage studies locate unit vectors along the
indicatrix axes (see Chapter 2: Location of the Optic Axes, page 5). To locate the unit
vectors in the auxiliary reference frame (xyz), we need the locations of the poles to the
feldspar cleavage forms {010} and {001}. We will designate unit vectors normal to the
(010) and (001) cleavages by p and q. The location of these vectors in the spindle stage
reference frame can be determined optically. The first step is to locate the a-axis of the
crystal. We begin by determining the interfacial angle between the cleavages from the dot
product of p and q:
p • q = cos ε (3.45)
where ε is the angle between the cleavages. The cross product of p and q can now be used
to provide an expression from which a unit vector along the a-axis can be calculated:
p × q = sin ε a (3.46)
where a is a unit vector parallel to the a-axis of the unit cell. Next we locate the c-axis.
The interaxial angle, β°, between the a-axis and the c-axis of the crystal lattice is needed
for the calculation. This angle can be obtained from powder diffraction data that has been
refined for the unit cell parameters. The (010) plane is normal to p and contains both the
a-axis and the c-axis. Consequently, we can locate the c-axis by solving the set of
equations (see Appendix: Solution of the Product Equations, page 96):
c × a = sin β , p (3.47)
c • a = cos β , (3.48)
35
Chapter 3: Optical Orientation of Biaxial Crystals
x • i = cos Θ (3.49)
Remember, i is a unit vector we locate from the spindle stage data, given the optic sign of
the crystal (see Chapter 2: Location of the Optic Axes, page 5).
The y-axis of the auxiliary reference frame is normal to the c-axis (i.e. x) and to
the pole to (010), p. The x-axis and the pole to (010) are also perpendicular.
Consequently a unit vector parallel to the y-axis can be calculated from:
p× x = y (3.50)
The nodal vector, E, can be located because we know the locations of i, x and the value
of the first Euler angle, Θ:
E = x × i = sin Θe (3.51)
The magnitude of the second Euler angle, Φ, can next be calculated from the expression:
The magnitude of the third Euler angle, Ψ is then calculated from the expression:
Again remember that j is a unit vector that results from the spindle stage data (see
Chapter 2: Location of the Optic Axes, page 5).
In summary, the calculation of the Euler angles for minerals with (010) and (001)
cleavages proceeds as follows:
1. Calculate the unit vectors normal to the cleavages (010) and (001), p and q, from their
spindle stage angles, S and E.
2. Calculate the interfacial angle, e, with the dot product of p and q [Equation (3.45)].
3. Locate the unit vector parallel to the a-axis, a, with the dot and cross products of p
and q [Equations (3.45) and (3.46)].
4. Calculate the unit vector parallel to the c-axis, c, using the interaxial angle β° in the
dot and cross products of c and a. The x-axis of the auxiliary reference frame is
parallel to [001], consequently c is parallel to x.
36
Chapter 3: Optical Orientation of Biaxial Crystals
5. The first Euler angle, Θ, is calculated with the dot product of i and x; unit vectors
parallel to the X vibration direction and the x-axis.
6. Calculate the unit vector parallel to the y-axis of the auxiliary reference frame with
the cross products of p and x [Equation (3.50)].
7. Calculate the nodal vector, E, from the cross product of x and i [Equation (3.51)].
8. Calculate the second Euler angle, Φ, with the expression for the dot product of E and
y [Equation (3.52)].
9. The last Euler angle, Ψ, is calculated with the expression for the dot product of E and
j [Equation (3.53)].
This procedure for obtaining Euler angles does not produce unique results. The
reason for this will be apparent to those familiar with the problem of positive and
negative extinction angles on determinative curves. Because of the centrosymmetric
properties of the usual optical observations, we cannot always distinguish the positive and
negative sides of a crystallographic plane. Although the intersection of (010) and (001)
defines the a-axis we cannot be sure that Equation (3.46) actually defines the positive a-
axis. Another way of expressing the same dilemma is illustrated on Figure 3-4. The cross
product of p and q define a unit vector normal to the plane that contains them, a. Without
additional data, however, we do not know in which direction along the great circle
representing the trace of (010) to go to locate c. Is it at c1, or c2? The procedure which we
have outlined cannot distinguish between these possibilities and we must turn to
mineralogy texts for information that designates the correct orientation. The monograph
by Burri, et al. (1967) will give sufficient information to choose the correct orientation
for plagioclase. For other minerals, Deer, et al. (1966) or Bambauer, et al. (1979) are
likely sources of information.
The optically recognizable crystal surfaces in minerals other than feldspars may
not be parallel to (010) and (001). However the Euler angles refer to a Cartesian reference
frame in which c and x coincide and in which z is normal to (010) (i.e. z equals p in the
feldspar example). Consequently, the Euler angles can be calculated only after c and z are
located [see Equations (3.49)-(3.53) with z substituted for p and c for x]. It remains then,
to locate c and z, given the locations of two unit vectors, p and q, normal to two crystal
surfaces, (h1k1l1) and (h2k2l2).
37
Chapter 3: Optical Orientation of Biaxial Crystals
p • q = cos ε (3.54)
Next, locate a vector along the line of intersection of (h1k1l1) and (h2k2l2). Such a vector
can be obtained from p and q:
p × q = sin ε s (3.55)
In theory, another vector parallel to s can be constructed from the unit cell properties of
the mineral:
S=ua+vb+wc (3.56)
where a, b, and c are vectors along the unit cell axes and u, v, w are given by:
u k1l2 − k 2 l1
v = h l − h1l2 (3.57)
21
w h1k 2 − h 2k1
S
s= (3.58)
S •S
Next, we note that our unknown vector, z, is related to the unit cell vectors by:
c×a
z= = cos µ (3.60)
acsin β ,
At this point we are in a position to calculate the angle, µ, between z and s by using
Equations (3.56), (3.58) and (3.60). After some algebra, we get:
V
z•s = = cos µ (3.61)
s • s ac sin β ,
where V is the unit cell volume [see Bloss, 1971, p. 501]. Notice particularly that
everything between the equal signs in Equation (3.61) can be evaluated from powder
38
Chapter 3: Optical Orientation of Biaxial Crystals
diffraction data that has been refined for the unit cell parameters. Consequently, µ can be
calculated.
The next step is to locate z in the spindle stage reference frame. To do this we will
need the angles between z and p and between z and q. Equations for calculating
interfacial angles, which are equal to the angles between face normals, are given in
crystallography texts (see Bloss, 1971, p. 64). The data required for the calculations are
the unit cell parameters and the Miller indices of the faces, (h1k1l1), (h2k2l2) and (010).
Alternatively, you can read ahead in Chapter 4 and find out how to construct vectors
normal to a crystallographic plane. The dot product will then produce the required angles.
In any case, given the unit cell parameters, we can calculate the angles, δ1 and δ2, that
satisfy the relationships:
z • p = cos δ 1 (3.62)
z • q = cos δ 2 (3.63)
z ×( p × q)
z×s = (3.64)
sin ε
z×s =
(z • q ) p − (z • p)q (3.65)
sin ε
p cos δ 2 − q cos δ1
z×s = (3.66)
sin ε
Equation (3.66) plus the dot product of z and s [Equation (3.61)] are sufficient for
locating z. The procedure is a slight modification of that described in The Appendix
(Solution of the Product Equations, page 96). Hence, we have located z.
39
Chapter 3: Optical Orientation of Biaxial Crystals
calculate the angle between R and c. This latter value is given by:
where:
c × r = sin χ z (3.69)
c • r = cos χ (3.70)
After locating c and z, the Euler angles are calculated as described earlier for the
feldspars. Again, there is an ambiguity in the results; on which side of r does c lie in the
(010) plane? Recourse to a mineralogy text must be made to determine which is correct.
A stereographic projection of the general case is shown in Figure 3-5. The location of c
can be either parallel to c1 or c2.
The detent spindle stage (Bloss, 1981) is not constructed to provide accurate
measures of the S angles except at even 5° intervals. Consequently, accurate locations of
p and q are difficult to attain with the spindle stage. Powder diffraction data, on the other
hand, give precise estimates of the unit cell parameters and from which a precise value of
the interfacial angle between (h1k1l1) and (h2k2l2) can be calculated. In other words, the
value of ε in Equation (3.46) or (3.54) is more precisely determined from the x-ray data
than from the spindle stage data. To take advantage of this precision, one can calculate
new locations for p and q that are as close as possible to the spindle stage locations but
satisfy the interfacial angle determined by the x-ray data. This is done by employing the
Lagrange multiplier technique (Appendix, page 98). To do this, minimize the expression:
where p and q are the new, relocated, vectors and p' and q' are their locations from the
spindle stage data, subject to the constraints:
40
Chapter 3: Optical Orientation of Biaxial Crystals
p• p =1 (3.72)
q•q =1 (3.73)
p • q = cos ε (3.74)
Summary
Tables 3-2, 3-3, and 3-4 contain the expressions for writing down the lattice
vectors as functions of the unit vectors along the indicatrix axes. To use the resulting
equations we must have recourse to some primary optical data such as compiled by Deer,
et al. (1966) or by Bambauer, et al. (1979). If the mineral is orthorhombic all we need is
information as to which of the six possible orientations is correct for the mineral under
consideration. For monoclinic minerals, we need to find out which of the principal
vibration directions parallels the b-axis and what is the appropriate extinction angle in
(010). Often the extinction angle between the c-axis and the principal vibration direction
listed in Table 3-3 is not specifically given in the compilations of data. In such case, you
will need to calculate it from the extinction angle given and, if necessary, the interaxial
angle, β°. To date, Euler angles are available only for the plagioclase feldspars. The
primary reference to these data is Burri et al. (1967). Diagrams constructed with these
data are in Bambauer et al. (1979). It’s likely that future compilations will take advantage
of the precision offered by Euler angles to specify the optical orientations of triclinic
crystals.
Euler angles can be obtained from spindle stage and powder diffraction data if the
crystal has two optically recognizable crystal surfaces (cleavages, composition planes,
crystal faces). The Lagrange multiplier technique allows one to specify the locations of
unit vectors normal to the crystal surfaces that are consistent with the x-ray data.
41
Chapter 3: Optical Orientation of Biaxial Crystals
Problems
1. An orthorhombic mineral with axial ratios 0.5:1:0.3 shows an optic axis figure with a
negative sign on a section cut parallel to (110). What is the optic angle? What are the
components of the wave normal vector in the indicatrix reference frame?
2. A monoclinic mineral is known to have the following properties:
a:b:c = 0.5:1:0.6, β° = 120° (101), ( 101) and (010) cleavages.
On one cleavage fragment a centered optic axis figure is displayed with a negative
sign. On a second cleavage fragment a Bxo figure is displayed and on a third cleavage
fragment, an optic normal figure is shown.
What is the optical orientation of the mineral? Is your answer unique? If not, what
measurements could you make to remove the ambiguities?
3. Derive Equation (3.24) from Equations (3.21)-(3.23).
4. Use the expression for x given by Equation (3.40) to find an expression for y from
Equations (3.41) and (3.42).
5. Use the expression for x given by Equation (3.40) to solve Equations (3.43) and
(3.44) for z.
6. Estimate values for the Euler angles of kyanite from the description of its optical
properties in Deer, et al. (1992), p.59.
7. The spindle stage coordinates of the poles to the cleavages of a plagioclase are:
S E
(010) 114.0 56.0
(001) 96.0 141.0
If the spindle stage coordinates of the principal vibration directions are:
S E
X 16.1 55.7
Y 20.7 145.6
Z 107.5 87.8
what are the Euler angles for this crystal? A stereographic projection is one method
for the obtaining the required values.
42
Chapter 4 - Extinction Angles in Biaxial Crystals
Introduction
An extinction angle is often one of the most diagnostic measurements we can
make to identify minerals in thin section. Witness the plagioclase feldspars whose
compositions we estimate with extinction angle measurements. Invariably, an extinction
angle is measured between a vibration direction and the trace of a crystallographic
surface in the plane of the thin section. Such features are commonly produced by
cleavage planes or the composition planes of twins intersecting the thin section. In this
chapter we will describe how the extinction angles in sections defined by a given
(known) wave normal can be calculated. The results of the calculations can then be used
to plot determinative curves of extinction angle versus composition or extinction angle
versus structural state. Several of the more common types of calculations have been
incorporated into the computer program, Optics.exe.
Q = w ×d (4.1)
If n is a unit vector parallel to a vibration direction in the plane of the thin section, then
the extinction angle, θ, will be implicitly defined by:
n • Q = w × d cos θ (4.2)
Equation (4.2) can provide us with a value of the extinction angle if we know n,
w, and d. The relationship between n and w was covered in Chapter 2 and d can be
calculated if we can relate the normal to a lattice plane to the optical orientation of the
crystal. We covered optical orientations in the last chapter. The equations for representing
w and d as functions of the lattice vectors are the first subjects of this chapter.
43
Chapter 4: Extinction Angles in Biaxial Crystals
Crystallographic Vectors
A vector parallel to a particular lattice direction, [uvw], is particularly easy to
write in terms of the lattice vectors, a, b, and c:
d[uvw ] = ua + vb + wc (4.3)
To find a unit vector normal to a lattice plane with Miller indices (hkl) we proceed
as follows. The intercepts of the plane and the lattice vectors determine new vectors
parallel to the lattice vectors: a/h, b/k, and c/l. From these we can construct two more
vectors that lie in the lattice plane, such as (b/k - a/h) and (c/l - a/h). The relationships
between these vectors are shown on Figure 4-1. A vector normal to the lattice plane will
be parallel to the cross product of the two vectors:
(k h l )(
d(hkl) = b − a × c − a
h ) (4.4)
h (b × c ) + k (c × a ) + l (a × b )
d(hkl) = , h, k , l ≠ 0 (4.5)
hkl
44
Chapter 4: Extinction Angles in Biaxial Crystals
If either the vector defined by Equation (4.3) or by Equation (4.5) is to represent a wave
normal vector, we will need to change it into a unit vector in conformity with our usage
in Chapter 2. To do this, simply divide d by the square root of the dot product of the
vector with itself:
d
d= (4.6)
d•d
In thin section, wave normals parallel to [uvw] are recognized by the intersection
of two crystal surfaces, (h1k1l1) and (h2k2l2). The Equation Set (3.57), Chapter 3, relates
[uvw] to the Miller indices of the two planes. Those interested can form two vectors,
d(h1k1l1) and d(h2k2l2), with Equation (4.5) as a model, take the cross product and show
that it is a vector parallel to that defined by Equation (4.3). This exercise is also a
derivation of the Equation set (3.57) in Chapter 3.
45
Chapter 4: Extinction Angles in Biaxial Crystals
grain mounts of plagioclase fragments contain several grains with wave normals
perpendicular to (001). Such grains can be recognized by sharp albite twin composition
planes and (010) cleavage traces. The extinction angle between the fast direction and the
a-axis [which lies in (001), remember] can be used to estimate the An content. A
determinative curve for this purpose is plotted in Figure 4-2 from data calculated with the
program Optics.exe.
46
Chapter 4: Extinction Angles in Biaxial Crystals
related by the Carlsbad twin law. In this section we will develop a systematic method for
calculating extinction angles in sections with wave normals that are evenly spaced within
a given lattice plane, (hkl). From these kinds of data one can construct determinative
curves for extinction angle measurements made in sections normal to (hkl).
First of all, we suppose that the lattice plane (hkl) is not perpendicular to the c-
axis [001]. Note that this supposition can be wrong only if the crystal is orthorhombic. In
monoclinic and triclinic crystals, [001] cannot be normal to a lattice plane (hkl);
otherwise it would no longer be monoclinic or triclinic. If our supposition is true, then the
plane normal to the c-axis and the plane (hkl) will intersect. A vector that lies in the plane
(hkl) and is normal to the c-axis, [001], is given by:
P
p= (4.8)
P•P
w n • p = cos θ n (4.10)
where θ1 = 0, θ n+1 = θ n + ∆θ .
47
Chapter 4: Extinction Angles in Biaxial Crystals
If the plane in question is (001) and if the crystal is orthorhombic, our supposition
that (hkl) is not normal to [001] is false. In this case, we define a set of wave normals in
(001) by the equations:
The Carlsbad-albite method (Tobi, 1963; Tobi and Kroll, 1975) of determining
plagioclase compositions is based on measurements of extinction angles for wave
normals that lie in (010). The method is arguably the most widely applicable, precise
method of determining plagioclase compositions in thin section by optical methods. It is
also the most complicated of the commonly used methods of determining plagioclase
compositions and requires the most insight into the theoretical basis for the method. The
a-normal method is just as precise as the Carlsbad-albite method but finding sections cut
normal to [100] is more difficult than finding sections cut normal to (010). The Carlsbad-
albite method is superior to the Michel-Levy method because no assumptions are made
about finding the maximum extinction angle and about uniform plagioclase compositions
in the thin section.
The Carlsbad-albite method could easily be called the Carlsbad method because it
is the Carlsbad twin that is required for the method to work. The albite twins provide
redundant information that can be used to check the reliability of the Carlsbad data but
extinction angles in adjacent albite twins are not required for the method to work.
Redundant data or information is seldom, if ever, useless. Redundant data or information
is always, or nearly always, necessary for estimates of reliability of an experimental or
analytical result.
Extinction angle curves in sections normal to (010) for three compositions of high
structural state plagioclase series are plotted in Figure 4-4. The plots were made with
results calculated by the program Optics.exe. Burri, et al. (1967) measured the Euler
angles required for the calculations. The signs (±) of the extinction angles in Figure 4-4
48
Chapter 4: Extinction Angles in Biaxial Crystals
were assigned according to the location of the fast direction in a stereographic plot of the
crystal lattice in standard orientation (see Bloss, 1971, p. 87-91). If the fast extinction
direction falls between (010) and: − y , the extinction angle is positive. If the fast
direction falls between (010) and y, then the extinction angle is negative. This convention
conforms to the designation of signs of extinction angles in plots for determining
plagioclase compositions with the Carlsbad-albite method, in most instances (see Deer, et
al., 1992, p. 449). These curves are of no practical use, however, unless one knows the
angle of the wave normal in (010).
The curves plotted in Figure 4-4 provide insight into how extinction angles in
Carlsbad twins are related. If a plagioclase grain displays a Carlsbad twin, the individuals
forming the simple twin are related as shown in Figure 4-5. The twin axis [001] is normal
to the twin plane, a macroscopic mirror plane. The composition plane belongs to the form
{hk0} and is most commonly (010). If the c-axis is oriented vertically, then the twin
individuals are side-by-side in a horizontal arrangement (Figure 4-5). A thin section cut
perpendicular to (010) in such a grain will pass through both parts of the twin. One
individual will have a wave normal that falls between 90° (wave normal parallel to [001])
and 180° [wave normal ⊥[001]/(010)] on Figure 4-4, whereas the other individual will
have a wave normal between 0° [wave normal ⊥[001]/(010)] and 90° (wave normal
parallel to [001]). Consequently, the two individuals forming the Carlsbad twin will have
different extinction angles between the fast direction and the trace of (010). There are two
particular orientations for which this conclusion does not follow. First, if the thin section
is cut parallel to [001], but normal to (010), then the extinction angles in the individuals
will be symmetrical (Figure 4-5). Second, in thin sections cut perpendicular to the c-axis,
thus parallel to the Carlsbad twin plane, the extinction angles will be identical and the
trace of the composition plane will be invisible.
If extinction angles are measured in the two individuals of a Carlsbad twin, the
positions of the wave normals will be symmetrically displaced from the Carlsbad twin
plane (90° position, Figure 4-4). The lines marking the two extinction angles both cross
the same compositional contour at equal distances from the 90° position on the vertical
axis. An example is shown on Figure 4-4. Figure 4-4 would obviously be difficult to use
49
Chapter 4: Extinction Angles in Biaxial Crystals
Figure 4-6 has composition plotted against the position of the wave normal in
(010). This diagram shows the extinction angles, rather than compositions, as contours.
To use this diagram as a determinative chart, the measured extinction angles are
interpolated in the parts of the diagram above and below 90°. Again, the wave normal
positions must be symmetrical about 90° and single valued in composition. Finding the
appropriate composition on Figure 4-6 is still no walk in the park. If the diagram is
reflected at the position of the Carlsbad twin plane so that upper and lower parts of the
diagram are superimposed, then finding symmetrical position is simplified. The
geometrical relationship between the reflected diagram and the Carlsbad twin is shown
on Figure 4-7.
The modified diagram for disordered plagioclase is shown on Figure 4-8. To use
the diagram, the dashed contour representing the larger extinction angle is followed until
it crosses the solid contour that represents the smaller extinction angle. The point of
intersection locates the positions of the wave normals in (010). Points on the solid
contours lie between 0° and 90°, whereas points on the dashed contours fall between 90°
and 180°.
Construction of Figure 4-6 and Figure 4-7 requires extinction angles at fixed,
integer values. Numerical methods can supply the required data. Iterative methods can
provide the needed positions of the wave normals for the fixed values of the extinction
angles if initial estimates of the positions can be found. The routine to calculate extinction
angles at evenly spaced positions of the wave normals supplies the required estimates. A
routine exists in Optics.exe for doing the iterations to provide the wave normal position
at a fixed value for the extinction angle. Another method for obtaining the required
extinction angles and wave normal positions is to calculate the extinction angles for wave
normals parallel to lattice directions, [u0v], in (010). Some examples are shown on
Figure 4-9. An extinction angle is calculated for a wave normal for a particular lattice
direction and particular plagioclase composition. The wave normal will have a fixed
50
Chapter 4: Extinction Angles in Biaxial Crystals
position in (010) if the mineral has a fixed composition and degree of order. The position
of the wave normal changes very little across the compositional range of disordered
plagioclase.
Their intersections are parallel to the c-axis. Hence, sections cut parallel to the c-axis will
display parallel traces of intersecting cleavage planes. Unfortunately, this is not a
sufficient criterion for ensuring that the plane of the thin sections is parallel to (010)
because all sections in the zone [001] will display these features. The identification of
sections parallel to (010) is usually made with an interference figure that shows a
centered bisectrix if the b-axis is parallel to X or Z or a centered optic normal figure if the
b-axis is parallel to Y. To use the characteristic extinction angle as a diagnostic property,
one must ensure that it is measured in (010). In the zone [001] the extinction angle in
sections parallel to (100) will be zero whereas in a section parallel to (010) it will be the
characteristic value, θ [Table 3-3]. Although it would be convenient if the maximum
extinction angle in the zone [001] occurred on (010), such need not be the case. This has
been known since Daly (1899) proved it by deriving a simple equation relating extinction
angles to the angle between the thin section and the pole to (100) in the zone [001]. Su
and Bloss (1984) provide a recent discussion of the problem.
Extinction angles to the c-axis in sections parallel to [001] are given by relatively
simple equations that are particular cases of the more general problem of locating
vibration directions in thin sections cut parallel to a zone axis [uvw]. Because a general
procedure for locating such vibration directions is very similar to that just described for
sections normal to (hkl), we will discuss the general case first. A detailed look at the
special monoclinic calculations will be presented later.
51
Chapter 4: Extinction Angles in Biaxial Crystals
We want to find a set of wave normals that lie in a common plane. The plane
itself is identified as one perpendicular to a crystallographic direction [uvw]. If [uvw] is
not [001], the c-axis, then one way of defining the set is to first calculate the vector:
P
p= (4.14)
P•P
wn • p = cos θ n (4.16)
where θ1 = 0, θ n+1 = θ n + ∆θ .
If [uvw] is [001] then an analogous result can be obtained by defining the set of
wave normals with the equations:
where θ1 = 0, θ n+1 = θ n + ∆θ .
By definition, d(100) is normal to the (100) lattice plane. The c-axis, [001], must lie
in this plane, hence d[001] is normal to d(100). The reciprocal lattice vector, a*, is also
normal to the lattice plane (100) by virtue of the cross product. Consequently, d(100) and
a* are parallel. Because the standard stereographic projection has the a*-b* plane parallel
52
Chapter 4: Extinction Angles in Biaxial Crystals
to the plane of projection, the poles representing the wave normals in Equations (4.17)
and (4.18) plot on the primitive (See Bloss, 1971, Chapter 13 for a description and
discussion of the nature of the reciprocal lattice).
The most convenient reference frame in which to derive Daly’s Equation is the
auxiliary frame used to describe triclinic orientations with Euler angles (Chapter 3).
Monoclinic geometry in this reference frame produces the following equivalences:
c
x= (4.19)
c•c
y = d (100) , i.e. ⊥ (100 )
b
z= =j
b•b
These elements are shown in stereographic and orthographic projection in Figure 4-11.
The other elements used in the derivation are shown also.
The stereographic projection shows two great circles representing planes defined
by the wave normal, w, and optic axes vectors, u and v. According to the law of Biot-
53
Chapter 4: Extinction Angles in Biaxial Crystals
Fresnel, the vibration vector, n, in the section normal to w bisects the angle between these
planes. The angle between the vibration vector, n, and the c-axis vector, c, is the
extinction angle δ:
n • c = cos δ (4.20)
In a similar fashion, the principal vibration vector, k, bisects the angle between the optic
axes vectors and lies at an angle, θ, to c (see Chapter 3). Our aim is to find a relationship
between δ, the optic angle (Vz) and the orientation angles, θ and φ (Figure 4-11).
As a first step, we find vectors in the plane normal to w that also lie in the planes
defined by w and the optic axes vectors. These are given by:
T = w × (u × w ) (4.21)
S = w × (v × w ) (4.22)
T = u − (w • u ) w (4.23)
S = v − (w • v )w (4.24)
Next, take the dot products with the unit vector along the c-axis:
c • T = c • u − ( w • u )(c • w ) (4.25)
c • S = c • v − ( w • v )(c • w ) (4.26)
However, c and w are orthogonal vectors, consequently the last terms in Equations (4.25)
and (4.26) are zero. To find the angles between c and T and between c and S, we divide
Equations (4.25) and (4.26) by the magnitudes of T and S, respectively:
T • T = 1 − (w • u )
2
(4.27)
S • S = 1− (w • v )
2
(4.28)
54
Chapter 4: Extinction Angles in Biaxial Crystals
(c • u )
2
cos 2
(ε + δ ) = (4.29)
1 − ( w • u)
2
(c • v )
2
cos 2
(ε − δ ) = (4.30)
1 − (w • v )
2
where ε is the angle between the vibration vector, n, and the unit vector t or between n
and s, Figure 4-11. Equations (4.29) and (4.30) can be rearranged to give:
1 − ( w • u ) − (c • u )
2 2
tan (ε + δ ) =
2
(4.31)
(c • u )
2
1 − ( w • v ) − (c • v )
2 2
tan (ε − δ ) =
2
(4.32)
(c • v )
2
This last transformation to the tangent function is a natural step in Daly’s derivation. Our
vector methods, on the other hand, provide no direction in this regard. Although our use
of the tangent function seems arbitrary at this point, it does lead to a simple result.
The next step is to evaluate the dot products. We have immediately from the
definitions:
The others are readily evaluated if we write the optic axes vectors in terms of c and y
(Figure 4-11).
We can quickly calculate from these last two equations the dot products with the wave
normal vector:
55
Chapter 4: Extinction Angles in Biaxial Crystals
Substitution of Equations (4.33), (4.34), (4.37) and (4.38) into (4.31) and (4.32) gives:
2δ = (ε + δ ) − (ε − δ ) (4.41)
tan α − tan β
tan (α − β ) = (4.42)
1 + tan α tan β
A sin φ
tan 2δ = (4.43)
1 + B sin 2 φ
where:
Daly’s Equation, equation (4-43) shows that the extinction angle, /, to the c-axis
is a function of three variables: the position of the thin section in the zone [001], φ , the
optic axial angle of the crystal, Vz, and the extinction angle in (010), . The optic axial
angle and the extinction angle in (010) are fixed quantities in a given monoclinic crystal
with a uniform composition and structural state. Consequently, we can use Daly’s
Equation to classify and characterize extinction angle curves for monoclinic crystals with
Case 1 orientations and to predict extinction angles on {hk0} cleavage forms.
In order to locate the maximum or minimum extinction angles in the zone [001]
for a crystal with known values for Vz and the extinction angle in (010), θ, we calculate
the derivative of δ with respect to φ and set the result equal to zero. This operation
requires some algebra but the required derivative is given by:
56
Chapter 4: Extinction Angles in Biaxial Crystals
A cos φ (1 + B sin 2 φ )
dδ = (4.46)
dφ
2 (1 + B sin 2 φ ) + A2 sin 2 φ
2
This expression will be zero whenever at least one of the expressions in the numerator is
zero, subject to the proviso that the denominator is not simultaneously zero. The factors
of the numerator are:
cos φ = 0 (4.48)
The points at which these expressions are zero may represent maxima, minima or points
of inflection. Additional work will be needed to decide which is the case.
It is relatively easy to show that Equation (4.47) is true only for θ equal to zero. If
θ is zero, the Z vibration direction will be parallel to the c-axis of the crystal.
Consequently, the extinction angle will be zero for all sections in the zone [001] a value
that we will call a minimum.
Equation (4.48) is zero when φ is 90°. In other words, the extinction angle in
(010) represents a maximum or minimum (possibly an inflection point).
1 − cos 2 θ cos 2 φm
cos 2 Vz = (4.50)
1 + sin 2 φ m
where φm is the angle between the wave normal and the pole to (100) where the
extinction angle takes an extreme value. As we shall see, not all combinations of Vz and θ
can produce a valid value of φm from Equation (4.50).
parameter, we can plot Vz versus θ and produce a family of curves, one curve for each
57
Chapter 4: Extinction Angles in Biaxial Crystals
value of φm , that relates values of the three variables that satisfy Equation (4.49) and thus
defines the location of an extreme value on the extinction angle curve. Some examples
are shown in Figure 4-12. Solution of Equation (4.50) lies within regions of Vz- θ space
bounded by the curves:
Vz = π 4
Vz = π 2 − θ (4.51)
Vz = π 2 + θ
The values of the parameter, φm , along these boundary curves are 0 and π/2 (0 and 90
degrees, Figure 4-12). The regions which contain Vz- θ values that produce a maximum
or minimum on the extinction angle curves are contoured in values of φm . The result is a
chart that provides a rapid and convenient way of determining whether a mineral has the
orientation and optic angle for a maximum extinction angle in a section not parallel to
(010). Further it gives the approximate location of the section in the zone [001].
A few amphibole and pyroxene combinations are plotted on Figure 4-12 (Data
from Deer, et al., 1966; Su and Bloss, 1984). Many, but not all, of the optically negative
amphiboles have their maximum extinction angles on sections in the zone [001] that are
not coincident with (010). On the other hand, most of the optically positive chain silicates
lack this feature. The location of the section with the maximum extinction angle can be
anywhere from a section nearly parallel to (100) [i.e. at φm = 0)] to parallel to (010) [i.e.
at φm = π/2]. Amphiboles practically cover the range; the most extreme value is for an
amphibole culled from the literature by Su and Bloss (1984) [the point labeled ∆ on
Figure 4-12], which has the values:
Vz = 68.5
θ = 21.0
The value of φm corresponding to these data can be calculated with the aid of Equation
(4.49). The result is:
φm = 5.13
58
Chapter 4: Extinction Angles in Biaxial Crystals
These same criteria were obtained by Su and Bloss (1984) with a trigonometric inequality
and combined into the statement that a maximum extinction angle occurs on a section not
parallel to (010) if the obtuse bisectrix is within 45° of the c-axis.
In spite of our labeling the points at which the derivative of δ with respect to φ
[Equation (4.46)] is zero as maxima or minima, all we have shown is that they are critical
points on the extinction angle curves. They may well be inflection points. In order to
determine whether any of the critical points are inflection points we need to calculate the
second derivative of δ with respect to φ. From Equation (4.46) we get:
To determine what is the nature of the critical points, we need to know the sign of
the second derivative when the first derivative is zero. If the second derivative is negative
when the first derivative is zero, then the point on the curve is a maximum. If the second
derivative is positive, then the point is a minimum. If both derivatives are zero, then the
point is an inflection point. The only equation among the set of three, Equations (4.47)-
(4.49), that causes Equation (4.54) to be zero is Equation (4.47). As already noted,
Equation (4.47) is true only if θ is zero. In this case, however, extinction angles in the
59
Chapter 4: Extinction Angles in Biaxial Crystals
zone [001] are all zero. The extinction angle curve corresponding to this special case is
plotted on Figure 4-13 [Curve 6]. The curve has neither a maximum or minimum nor has
it a normal inflection point. It is just plain degenerate. Consequently, extinction angle
curves, for Case 1 monoclinic crystals, have no inflection points, only maxima or
minima.
Table 4-1: Nature of the second derivative at the critical points on the
extinction angle curve of sections in [001] for monoclinic crystals
with Y = b.
Criteria for Critical Points Value of Second Derivative
cos φ m ≠ 0 AB 2 sin φ cos 2 φ
1 − B sin 2 φm = 0 −
4 B + A2
A (1 − B )
1 − B sin 2 φm ≠ 0 cos φ = 0
2 (1 + B ) + A2
2
2sin 2θ
or: A=
cos 2Vz + cos 2θ
cos 2Vz − cos 2θ
B=−
cos 2Vz + cos 2θ
When either Equation (4.48) or (4.49) holds, then the second term in Equation
(4.54) is zero and has no influence on the sign of the second derivative. We need only
look at the first term. The criteria for locating the critical points and the value of the
second derivative at these points are listed in Table 4-1. By evaluating the second
derivative at several points in Vz-θ space, one can quickly see that both maxima and
minima exist. Both occur because we distinguish positive from negative extinction angles
in the (010) plane. If the slow vibration direction, Z’, lies within 45° of the c-axis and also
falls between the positive ends of the a-axis and the c-axis, then a maximum will occur. If
the slow direction, Z’, falls between the negative end of the a-axis and the positive end of
the c-axis, then a minimum will occur on the extinction angle curves. An analogous
situation holds when the fast vibration direction, X’, is within 45° of the c-axis. As a
result, Daly’s Equation [Equation (4.43)] only predicts extinction angles within the range:
60
Chapter 4: Extinction Angles in Biaxial Crystals
0 ≤ δ ≤ 45D (4.56)
Some typical extinction curves are plotted in Figure 4-13. They were calculated
with Daly’s Equation [Equation (43)] using the values of Vz and θ listed in the caption to
the Figure.
The crystals which have their Bxo within 45° of the c-axis also have an extremum
on their extinction angle curves at φ equal to 90° [i.e. in the sections parallel to (010)].
The extremum at this location is always of the opposite kind than that located at φm [see
Equation (4.50), Figure 4-11]. The complete extinction angle curve ( 0 ≤ φ ≤ π ) for
crystals with their Bxo within 45° of the c-axis are characterized by two maxima and a
minimum or vice-versa. Case 1 monoclinic crystals with their Bxo at angles greater than
45° from the c-axis possess extinction angle curves with only one extremum. This occurs
at φ equal to 90°, that is, in sections parallel to (010).
The values of δ m that correspond to φm [see Equation (4.50), Figure 4-11] are
contoured on Figure 4-14. This chart can be used to obtain a rapid estimate of the size of
the extremum on an extinction angle curve, given θ and Vz. Figure 4-12 will quickly give
its location in the zone [001]. If Vz is greater than 45° (i.e. the crystal is negative), then
the maximum extinction angle will be Z’^c on Figure 4-14. If the crystal is positive, the
plotted angles are X’^c.
Vz + θ = π (4.57)
2
Its reflection across θ equal to zero (Figure 4-14) would satisfy the requirement:
Vz − θ = π (4.58)
2
When either condition (4.57) or (4.58) [but not both, at least for the moment]
hold, Daly’s Equation (4.43) takes on an indeterminate form, ∞ ∞ . One can apply
L’Hospital’s rule to examine the nature of the extinction angle curve under these
61
Chapter 4: Extinction Angles in Biaxial Crystals
2sin 2θ sin φ
tan 2δ = (4.59)
cos φ cos 2Vz + cos 2θ (1 + sin 2 φ )
2
and examine its behavior when either Equation (4.57) or Equation (4.58) is true.
Substitution for θ in Equation (4.59) from either (4.57) or (4.58) gives:
tan 2Vz
tan 2δ = ± (4.60)
sin φ
The sign is chosen according to which substitution is made. If Equation (4.57) is used, the
negative sign applies. Except at φ equal zero, Equation (4.60) produces a perfectly
acceptable extinction angle curve. At φ equal to zero, the wave normal is parallel to an
optic axis and the thin section is parallel to a circular section for which there is no defined
extinction position. Because of the unbounded nature of the tangent function at π/2
radians, a limiting value of 45° is obtained as φ approaches zero. An extinction angle
curve for this special case is shown on Figure 4-13 (Curve 3). A stereographic
representation is shown on Figure 4-15.
The last special case (Curve 4, Figure 4-13) occurs when both Vz and θ are 45° In
this case, the wave normals all lie in one circular section and the c axis is parallel to the
other. If 2Vz is 90°, then Equation (4.60) indicates that δ will equal 45°, regardless of the
value of φ. At φ equal to zero, there is no defined extinction angle.
The various extinction positions for an arbitrary value of φ for each kind of
extinction angle are shown in stereographic projection in Figure 4-15.
In the other monoclinic orientations that are possible, either X or Z will parallel
the b-axis of the unit cell. For the case when X = b (Case 2, Table 3-3), an equation
analogous to Daly’s equation for Case 1 monoclinic crystals can be derived. It is:
A sin φ
tan 2δ = (4.61)
B − C sin 2 φ
where:
62
Chapter 4: Extinction Angles in Biaxial Crystals
A = cos 2 Vz sin 2θ
B = 1 − cos 2 Vz sin 2 θ (4.62)
C = 1 − cos Vz cos θ
2 2
It is an easy exercise to show that the only critical point occurs when φ is π/2 and that the
critical point is a maximum or minimum, depending on the value of θ.
To illustrate the effect of changing unit cell dimensions we will first look at the
difference in the extinction angles, Y^Tr(101) measured in (010). For forsterite this angle
is 38.5° and for fayalite is it 38.3°, a difference of only 0.2°. It is unusual to find an
olivine crystal with a zoning range greater than 30%. A zoning range of this extent would
produce a change in the extinction angle of approximately 0.06° - hardly significant, let
alone measurable in thin section.
63
Chapter 4: Extinction Angles in Biaxial Crystals
The direction cosines to the pole of (111) in forsterite are 0.7352, 0.3430 and 0.5846. In
fayalite the corresponding cosines are 0.7384, 0.3396 and 0.5826. The differences
between these numbers correspond to an angle of approximately 0.7°. Compared to the
change in position of an optic axis, 26° (δ2Vz/2), this is an insignificant change. The
difference in the extinction angle between the fast direction and the trace of (010),
measured on (111), for the two end members can be obtained from the data in Table 4-2
and is only 7.6°. The extinction angles are shown in stereographic projection for the two
end members on Figure 4-16. Assuming the variation in this extinction angle is
approximately linear across the olivine series, a change in composition of 10% Fo will
cause a variation of only 0.76° in the extinction angle - a change that would be difficult to
detect in thin section.
64
Chapter 4: Extinction Angles in Biaxial Crystals
Olivines, on the other hand, have no crystallographic guides for finding bisectrix
figures in thin section. Even experienced petrographers can become frustrated trying to
find appropriate sections for use with Kamb’s method. Such sections have intermediate
interference colors but not all sections with the same intermediate color will display a
bisectrix. In addition, the variation of 2V with olivine composition is such that a precision
of ±10° in 2V translates into a precision of approximately ±25 mole percent Fo
(Figure 4-17). Ideally, we would like a method of estimating olivine compositions that
utilizes easily discovered sections and is relatively precise. The method to be described
has approximately the same precision as the optic axial angle method but for which
appropriate sections are considerably easier to find. In short, the method to be described
is not very precise but is easier to use than one requiring an estimate of 2V. I think it fair
to say that a precise and efficient method of estimating olivine compositions in thin
section by optical methods does not exist and probably cannot be created.
Sections cut normal to an optic axis are much easier than bisectrix sections to
find. They are ideally isotropic and even with white light as the illuminator, the
dispersion of the optic axis is usually sufficiently small that such sections remain nearly
dark and evenly illuminated on rotation of the stage under crossed polarizers. Because
such sections are permanently at extinction, the angle cannot be an extinction angle but
65
Chapter 4: Extinction Angles in Biaxial Crystals
rather it must be an angle between the traces of crystallographic surfaces. Obviously one
limitation of the method is that the crystal you are examining must display intersecting,
extended if need be, traces of the crystal planes. Phenocrysts of olivine in volcanic rocks
commonly develop as euhedral crystals showing the form {021}. Some illustrations of
these are shown in Figure 4-18. Looking down an optic axis in a crystal bounded by this
form, the optic axis will emerge on a line bisecting the angle between (021) and ( 021)
[depending on which end of which optic axis is emerging from the section, the signs on
the Miller indices may have to be permuted].
Consequently, by rotating the stage of the microscope, we can measure the angle
between the traces of (021) and ( 021). This angle for the two olivine end members is set
down in Table 4-2 and the difference is 34.1°. Assuming the variation is linear across the
compositional range, a variation of one degree corresponds to approximately 3 percent
variation in composition. A calculated determinative curve for the olivine series is shown
on Figure 4-19.
For example, in all crystals with a center of symmetry, the form {100} consists of
two faces, (100) and ( 100 ). On the other hand, the form {111} consists of two faces in
66
Chapter 4: Extinction Angles in Biaxial Crystals
the holosymmetric triclinic class, (111) and ( 1 1 1 ) but consists of four faces in the
holosymmetric monoclinic class, (111), ( 1 1 1 ), (1 11) and ( 11 1 ). The question is, given
the form symbol and the symmetry of the crystal, how many nonparallel sets of traces can
we see in thin section? To answer the question, we need a list of the number of faces in
the various forms of the three crystal systems. Because of the symmetry center operation,
crystals with this property produce parallel faces on their forms. For example, the form
{hkl} in a crystal with a center of symmetry contains, at least, the faces (hkl) and ( hk l ).
In thin section, the trace of (hkl) and ( hk l ) will be parallel and, if contained within the
crystal as cleavage planes for example, indistinguishable. Consequently, we can ignore
faces in a form if their Miller indices can be obtained by multiplying each index of
another face by minus one. This is equivalent to ignoring the center of symmetry which is
what one does, in part, to obtain the other crystal classes from the holosymmetric one in
the biaxial systems. The list of faces that can produce distinguishable traces in thin
section is considerably shortened and is given in Table 4-3.
Table 4-3: Faces in forms that can create distinguishable sets of parallel
traces in thin section.
Form Triclinic Monoclinic Orthorhombic
{100} (100) (100) (100)
{010} (010) (010) (010)
{001} (001) (001) (001)
{hk0} (hk0) (hk0)( hk0 ) (hk0)( hk0 )
{h0l} (h0l) (h0l) (h0l)( h0l )
{0kl} (0kl) (0kl)( 0kl ) (0kl)( 0kl )
{hkl} (hkl) (hkl)( hkl ) (hkl)( hkl )( hkl )( hkl )
Suppose we are given the Miller indices of two crystal planes, (hkl) and (rst). We
then form two vectors normal to these planes [Equation (4.5)]. Next, we find vectors
67
Chapter 4: Extinction Angles in Biaxial Crystals
parallel to the traces of their intersection with the plane of the thin section [Equation
(4.1)]. Next, we impose the condition that these two vectors must be parallel (or
antiparallel) if the traces are to be parallel:
Thus:
if the traces are parallel. Expanding this last equation [i.e. let w × d (hkl ) equal A in
{d • [w × d ]} w − {w • [w × d ]}d
rst hkl hkl rst =0 (4.67)
The last term is zero because w is normal to w × d hkl and the cosine of 90° is zero.
Because the wave normal vector is not a zero length vector, its coefficient must be zero if
the traces of the two planes are parallel:
The position in which the vectors appear in a scalar triple product can be changed as long
as the cyclic order is preserved (Hoffmann, 1975, p. 78-79). As a result, we can write
Equation (4.68) in the form:
Equation (4.69) can be true only if one or more of the following situations occur:
2. The line of intersection of the two planes and the wave normal vector are at right
angles.
In other words, the wave normal and the zone axis for the two faces are
68
Chapter 4: Extinction Angles in Biaxial Crystals
perpendicular. Because the wave normal vector is a nonzero vector, the only remaining
possibility, which arises from the first situation, is for the cross product of the vectors
normal to the faces (hkl) and (rst) to be zero. In other words, the normals are parallel or
antiparallel. If the normals are parallel, then the faces themselves are parallel. This
situation was taken into account when we collected the data in Table 4-3.
Table 4-3 lists the Miller indices of the faces that will contribute a distinguishable
set of parallel planes belonging to the forms in biaxial crystals. If the wave normal, by
chance, happens to be normal to the zone axis of faces in the form, the number of sets of
traces will be reduced by the number of traces generated by the faces parallel to the zone
axis minus one. Against each of the sets of traces we can measure extinction angles.
If the overgrowths are epitaxic, then we should be able to correctly predict the
wave normal in the augite given a wave normal in orthopyroxene. An easy wave normal
to locate in the orthopyroxene is one parallel to an optic axis. The corresponding wave
normal in augite should then lie in (100) and at an angle to the common c-axis direction
equal to Vz for orthopyroxene. Consequently we can construct curves of extinction
angles to the trace of (100) versus the angle between the wave normal and the c-axis for
several members of the augite series (Figure 4-21). The extinction angle we measure
should then fall on the appropriate curve for an augite if the overgrowth is epitaxic.
69
Chapter 4: Extinction Angles in Biaxial Crystals
It is perhaps worth noting that a correct prediction does not prove epitaxy - rather
we can only say that the available data are consistent with such an interpretation or that
epitaxic growth did not take place because the predicted extinction angle does not agree
with the measured one.
Nicholls and Stout (1997) studied several overgrowths from the 1881 lava flow
that erupted from Mauna Loa, Hawaii. The results of more detailed study are consistent
with epitaxic growth (Figure 4-21). Pigeonite, however, was found to also be part of the
overgrowths and the sequence of crystallization was orthopyroxene followed by pigeonite
or augite. Thermodynamic models of the crystallization paths are consistent with
pyroxene crystallization at pressures greater than 0.18 GPa followed by magma transport
to shallower depths and pressures less than approximately 0.1 GPa where olivine
crystallized.
Problems
1. Derive an equation of the form:
d=ua+vb+wc
for a vector along the line of intersection of two lattice planes, (h1k1l1) and (h2k2l2).
2. Typical unit cell parameters for a monoclinic amphibole are:
a = 0.985 nm
b = 1.805 nm
c = 0.525 nm
b° = 105°
What is the 2V of an amphibole that has an extinction angle, Z^c, of 21 degrees on
(010) and an extinction angle of 16.6 degrees on (110)? What is the maximum
extinction angle in the zone [001]?
3. A titanian augite shows a centered optic axis figure in a section normal to [001]
and an extinction angle, Z^c, on (110) equal to 27.5 degrees. If its unit cell parameters
are:
a = 0.975 nm
b = 0.895 nm
c = 0.525 nm
b° = 105°
What is its optic axial angle? What is its maximum extinction angle in the
zone[001]? On what section does this maximum occur?
4. Derive Equation (61) and show that the only critical point occurs at f equal to p/2.
5. Construct an extinction angle curve for sections cut parallel to [001] of a pigeonite
with the following properties:
70
Chapter 4: Extinction Angles in Biaxial Crystals
a = 0.973 nm b=X
b = 0.895 nm 2Vz = 25°
c = 0.526 nm θ = Y^c =:49.0°
b° = 108°
6. Plagioclase zoning patterns are often complex. They can be normal, reverse,
oscillatory, patchy or a combination of any or all of these patterns. The most convenient
tool for describing the zoning pattern is the petrographic microscope. Explain how
extinction angles in sections normal to (010) can be used to determine the zoning pattern.
Describe any limitations or precautions that must be taken.
7. A mineral of the epidote group has the following properties:
Y=b θ = 90°
Cleavage: {001} b° = 115°
2Vz = 116°
Describe the extinction behavior in sections in the zone [001]. Do the same for
sections cut normal to (001).
8. Is it possible to use sections cut normal to an optic axis to determine plagioclase
compositions? Explain.
9. Construct determinative curves for estimating compositions of low structural state
plagioclase in sections cut:
Normal to [100]
Parallel to (001)
Parallel to (010).
In each case explain the situations (e.g. grain mount or thin section) where the curve
would be most useful or applicable (see Figure 4-2).
10. Construct extinction angle curves for sections cut normal to (010) in low
structural state plagioclases (see Figure 4-8).
11. Plot a curve in stereographic projection that shows the position of the vibration
vector closest to the c-axis in sections in the zone [001] for a monoclinic crystal with the
following properties:
Y=b
2V = 90°
θ = 45
How does this curve compare with analogous curves for monoclinic crystals that
have the properties listed in Figure 4-12? How do the analogous curves for minerals
with either X = b or Z = b compare?
12. Deer, et al. (1966) provide the following data for the hastingsite-ferrohastingsite
series:
Pargasite Ferrohastingsite
2Vα 120° 10°
θ (Y = b) 26° 12°
a ≅ 0.985 nm ≅ 0.985 nm
b ≅ 1.805 nm ≅ 1.805 nm
71
Chapter 4: Extinction Angles in Biaxial Crystals
c ≅ 0.525 nm ≅ 0.525 nm
b° ≅ 105° ≅ 105°
Cleavage {110} {110}
Assuming the variations in 2V and q vary linearly with composition, plot:
(1) The extinction angle on (110) against composition.
(2) The maximum extinction angle against composition.
(3) The location of the maximum extinction angle, dm, against composition.
Could any of these curves be practical tool for estimating composition? Explain.
72
Chapter 5: Location of Ray Paths
Introduction
If asked, most of us would define a ray path as the direction along which light
travels. On reflection however, such a definition is unsatisfactory because the wave
normal could be defined as the direction of travel and all optics texts emphasize that the
ray path and wave normal need not coincide in anisotropic media. Perhaps ray path would
be easier to define if we first answer the question: How do we know light travels from
here to there? The answer is, of course, that some action creates light at a source and
there is a reaction to the light at a receiver (i.e. we see something). The reaction takes
place because energy is transferred from the source to the receiver. In other words, the
ray path is the path along which energy is transferred. By and large ray paths do not play
a prominent role in optical mineralogy (e.g. Bloss, 1961; Nesse, 1991). Rather, it is the
vibration directions that are important and, as we have seen, these are associated with the
wave normal not the ray path. In spite of the relative importance of ray paths and wave
normals, students of optical mineralogy seem to have an instinctive need to know where
the ray paths are and students of optical mineralogy do ask about the location of ray
paths. In addition, the location of ray paths is required for a complete description of
interference figures. A completely rigorous and general mathematical description of the
phenomena leading to interference figures has not been developed, even though research
into the matter dates back to the late 1800s (Bethke & Birnie 1980). It is much easier to
determine the wave normals than the ray paths. The latest model for describing
interference figures (Bethke & Birnie 1980) assumes that wave normals are adequate
approximations to the ray paths. This chapter describes a method for finding the ray paths
associated with a given wave normal. Consequently, a quantitative evaluation of the wave
normal approximation follows. Bloss (1961, p. 77-78, 160-161), Wahlstrom (1979,
Appendix B), and Nesse (1991, p. 56-57, 80-81) describe graphical procedures for
finding ray paths. Graphical procedures, however, are not always practical methods for
finding numerical solutions to real problems. The vector-based method outlined in this
chapter results in an analytical expression for the angles between the wave normal and
ray path.
73
Chapter 5: Location of ray Paths
In this chapter, we will discuss the location of ray paths in anisotropic media.
Along the way, we will derive the indicatrix from a set of more fundamental equations,
called Maxwell’s Equations, and gain a deeper understanding of the manner in which
light and matter interact. Again, vectors provide a concise and elegant means of
describing the relationship between wave normals and ray paths but it is vector calculus
rather than vector algebra that is required. If you are not familiar with the operators of
differential vector calculus, div, grad, and curl, then you can either skip this section or,
more profitably, you can read the excellent book by Schey (1973) during an evening and
pick up enough to follow through this chapter.
Maxwell’s Equations
To start with, we need to define the vectors that describe the behavior of light in
crystals. Because light is a form of electromagnetic radiation, it seems natural that the
vectors will have to do with electricity and magnetism. There are actually two vectors
associated with each kind of phenomenon. The vectors having to do with electricity will
be labeled E and D. The nature of E and D are described by Bloss (1971, p.361-371) and
need not be elaborated here. Sufficient to say that if a crystal is placed in an electric field
described by the vector function E, then a current will tend to flow in the crystal parallel
to D. If the crystal is isometric or if an anisotropic crystal is given a particular orientation
with respect to E, then D will be parallel to E. In general, however, D and E are not
parallel and this is one way of defining optical anisotropy; the cause, E, and the response,
D, are not parallel in anisotropic media. When light is the source of the electric field, E,
the field oscillates, causing D to oscillate also. As it turns out, D is parallel to a vibration
direction in the crystal. Inside the crystal, E presumably still exists and it is the normal to
E that constitutes the ray path. In other words, energy is carried by the electric field and
its direction of transfer is normal to E. In summary then, two vectors D and E represent
the electric part of light. D is parallel to the polarization or vibration direction we have
been calculating. In fact a unit vector parallel to D is n. The normal to E is the ray path
and is not, in general, parallel to w, the wave normal. This latter vector, w, is normal to D.
Finally, we should note that even though D is the direction along which an electric
current tends to flow in response to E, there will be no net current if E is oscillating; as
74
Chapter 5: Location of ray Paths
many electrons will try to flow along +D as -D, thereby canceling the flow of electricity.
Similar to the vectors describing the electrical properties of crystals, there are two
vectors associated with their magnetic properties, B and H. If we place a crystal in a
sufficiently strong magnetic field, B, it will acquire a magnetic direction parallel to H.
The crystals that transmit light are found by experiment to be effectively isotropic in their
magnetic behavior. Consequently, B and H will be parallel and we can write:
B = µoH (5.1)
∂D
∇×H = (5.2)
∂t
∂H
∇ × E = − µD (5.3)
∂t
Notice that B does not appear in these equations. This is because of Equation (1), which
is valid only for small magnetic fields and for substances that appear isotropic in their
75
Chapter 5: Location of ray Paths
magnetic properties. When these conditions are not met, then the more extensive and
complete set of Maxwell’s equations must be used. Equations (2) and (3) are specialized
and do not represent a complete description of electromagnetic phenomena. Schey (1973,
p. 109) provides a complete statement of Maxwell’s Equations and with the help of Nye
(1957, Appendix H) you can easily obtain Equations (2) and (3) for the special case of
transparent crystals.
(
E = ED cos ω t − ω r • w
v ) (5.4)
You should convince yourself that Equation (4) describes a plane-polarized wave
in both space and time. For example, the cosine term is a scalar function of position and
time. Because it is a scalar, it can only modify the magnitude of E; it cannot change its
direction except by 180° when the cosine function switches from positive to negative.
That is, the cosine can take positive or negative values and E will be parallel to ± ED ,
depending on the sign of the cosine term, or E will be zero if the cosine term is zero.
Hence, E is forced to oscillate in the plane containing ED , forming a plane-polarized
wave. To show that Equation (4) represents a wave, plot the magnitude of E as a function
of time for a fixed value of r. Next, take t as constant and investigate the effect of the dot
76
Chapter 5: Location of ray Paths
In the indicatrix reference frame, the triple of numbers (X,Y,Z) represents a point
on the indicatrix and the equations for r and w can be written explicitly as:
r = Xi + Yj + Zk (5.5)
Next, we can show that Equation (4) satisfies the classic wave equation, which is a partial
differential equation of the form:
∂2F
v 2∇ 2 F = (5.7)
∂t 2
where v is the speed of the wave and F represents whatever is doing the waving. In our
problem, this would be E. If our guess as to the form of E is correct [Equation (4)], then
when we substitute E for F in Equation (7), the result should be an identity. This can be
shown, perhaps most elegantly, by first writing E in the form:
E = φ ED (5.8)
(
φ = cos ω t − ω r • w
v ) (5.9)
∂ 2E ∂ 2φ
= E D (5.10)
∂t 2 ∂t 2
In order to get an identity out of Equations (7) and (8) we have to show that by
substituting Equation (8) into the left hand side of Equation (7) we can obtain:
v 2∇ 2 E = ED ( v 2∇ 2φ ) (5.11)
Equation (8) can be reduced in such a fashion by applying some vector algebra and the
identities listed in Table A-1 in the Appendix. This is left as an exercise for the reader.
77
Chapter 5: Location of ray Paths
plane-polarized wave in space and time and that it satisfies the classic wave equation. We
next want to obtain an equation for H by substituting our expression for E [Equation (8)]
into Equation (3).
We take the curl of E, as given by Equation (8) and use Identities 2 and 7, Table
A-1, to get from Equation (3):
∂H
µD = − ( ∇φ ) × ED (5.12)
∂t
ω∇ ( r • w ) ω (r • w )
∇φ = sin ω t − (5.13)
v v
But you can easily check from Equation (6) that the gradient of the dot product, r • w , is
equal to:
∇ (r • w ) = w (5.14)
ω (r • w )
ω sin ω t −
v
φ'= (5.15)
v
∂H 1
= − φ ' ( w × ED ) (5.16)
∂t µD
Equation (16) is important because at a fixed point in space [remember the partial
derivative with respect to time is evaluated at a fixed point where (X,Y,Z) are constant] it
says that the magnetic field vector, H, is normal to the plane containing w and E.
Figure 5-1 shows in a schematic fashion, the relationship between E, w and H that
Equation (16) requires. An explicit expression for H is obtained by integrating Equation
(16) with respect to time at constant r:
78
Chapter 5: Location of ray Paths
φ
H= ( w × ED ) (5.17)
µD v
where we have arbitrarily set the constant of integration equal to zero. This is our
expression for H and all that is left is to take the curl of H, substitute the result into
Equation (2) and solve for D. The details follow almost exactly the steps that lead to
Equation (17):
φ
D=− w × ( w × ED ) (5.18)
µD v
Because there are no derivatives left in Equations (17) and (18), we can combine ED and
φ and recover E in Equations (17) and (18):
w×E
H= (5.19)
µD v
w × ( w × E)
D=− (5.20)
µD v 2
according to Equations (19) and (20), D is normal to the plane of H and w. The
plane normal to H, according to Equation (19), contains E. Consequently, E, D and w
must be coplanar. D is shown schematically on Figure 5-1 in relation to E, w and H. It
can be shown that the direction of energy transfer is proportional to E × H (see for
example Lipson and Lipson, 1969, p. 73) by employing the theorems of integral vector
calculus. Consequently, the ray path, R, can be inserted into Figure 5-1 and we reach the
important result that the wave normal, a vibration direction and the ray path associated
with that vibration direction are all coplanar. This statement is included in texts on optical
crystallography. We have just shown that it is a consequence of Maxwell’s Equations and
the wave properties of light.
We next expand the triple product in Equation (20) [see Equation (3.34), Chapter
3, p. 33] with the result:
µD v 2 D + ( w • E ) w - E = 0 (5.21)
Equation (21) is a vector equation relating D and E. It has been derived without
79
Chapter 5: Location of ray Paths
E = µD v 2 D (5.22)
The terms before D constitute a scalar, hence, Equation (22) says the two vectors, E and
D, are parallel as they must be in isotropic media.
Before we describe these two vectors and their relationship, we need to fix in our
minds the following facts about tensors.
2. Tensors come in various sizes and the size of a particular tensor depends on the
number of dimensions involved and the complexity of the property being described.
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Chapter 5: Location of ray Paths
For example, in three dimensions, the world we live in, the size of a tensor is given by
3n, where n is a measure of the complexity of the property being represented. In the
space-time world of relativity the number of dimensions is four and the size of a
tensor would be given by 4n. If n is equal to zero, then the tensor has only one
component and is equivalent to a scalar. In fact a scalar can be described as a zero
rank tensor. In our everyday world of three dimensions, a tensor for which n is equal
to one has three components, just like a vector. A vector then, is the same as a first
rank tensor. If n is equal to two, the tensor is of second rank and can be used to
describe the optical properties associated with the indicatrix. Because indicatrix space
spans three dimensions, such tensors will have nine components (32).
3. Tensors are designed to be invariant with respect to the coordinate system used to
describe the property. For example, if the temperature in Calgary is 25øC, then the
zero rank tensor that describes temperature has to give the same result whether we
locate Calgary by latitude and longitude or whether we locate Calgary with respect to
a coordinate system with an origin at the center of the moon. In fact, mathematicians
rigorously define tensors by how they behave under a change of coordinate system. If
we look at a fixed vector with components V1, V2, V3 in one coordinate system, then
it is easy to show that in a different coordinate system the components will change but
that the vector itself doesn’t. A two dimensional example of this fact is shown in
Figure 5-2. What is true for vectors is true for tensors in general. A change in
coordinate systems produces a change in the components of a tensor but their total
representation of a physical property does not change.
V = Vx i (5.23)
rather than:
81
Chapter 5: Location of ray Paths
κ 11 E1 + κ 12 E2 + κ 13 E3 = D1
κ 21 E1 + κ 22 E2 + κ 23 E3 = D2 (5.25)
κ 31 E1 + κ 32 E2 + κ 33 E3 = D3
where Di and Ei are the components of D and E in our arbitrary reference frame and the
κij are the components, in this reference frame, of the second rank tensor that relates D
and E. If we write the set of Equations (25) in matrix form we get:
κ 11 κ 12 κ 13 E1 D1
κ
21 κ 22 κ 23 E2 = D2 (5.26)
κ 31 κ 32 κ 33 E3 D3
KE = D (5.27)
where K represents the second order tensor and E and D have their usual meaning as
vectors.
The tensors that represent many physical properties can be referred to a special set
of axes such that Equations (26) can be written:
κ 1 0 0 E1 D1
0 κ 0 E2 = D2 (5.28)
2
0 0 κ 3 E3 D3
where the κ i are nonzero components of K in this new reference frame. The restrictions
on the tensor and details of obtaining the κ i from the κ ij are given in Nye (1957). What
we need to note is that K is equally well represented by either the square matrix in
Equations (26) or in Equations (28). The differences are solely due to a change in
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Chapter 5: Location of ray Paths
coordinate system. Using the tensor representation in Equations (28), then we can write
out Equation (27) as:
Hence, another way of writing a vector is KE, the matrix product of a second rank tensor
and another vector.
You should convince yourself that, in general, the tensor K operates on E in such
a way that a new vector results which is not parallel to E (Figure 5-3).
In order for Equation (29) to reduce to the isotropic case and look something like
Equation (22), all the κi’s would have to be equal, say to κ:
κE=D (5.30)
1
κ= (5.31)
µD v 2
An index of refraction is the ratio of the speed of light in a vacuum to the speed in
a substance. If we are going to relate speeds and refractive indices, we will need an
expression for the speed of light in a vacuum. Presumably, a vacuum is isotropic and
uniform throughout the universe. Consequently, in a vacuum, D and E should be related
by:
κο E = D (5.32)
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Chapter 5: Location of ray Paths
∇•E = 0 (5.33)
Equation (33) is another of Maxwell’s Equations that has been simplified because we are,
at present, dealing with a vacuum [see Schey (1973), p. 146]. First take the curl of
Equation (3) and substitute Equations (2) and (32):
∂ [∇ × H ]
∇ × ( ∇ × E ) = − µD (5.34)
∂t
∂2D
∇ × ( ∇ × E ) = − µD (5.35)
∂t 2
∂ 2E
∇ × ( ∇ × E ) = − µDκ D (5.36)
∂t 2
Next use identity 1 in Table A-1 and take into account Equation (33):
∂ 2E
∇ E = µDκ D 2
2
(5.37)
∂t
Equation (37) has the form of the classic wave equation [cf. Equation (7)] if we make the
following identification:
1
c2 = (5.38)
µDκ D
Equations (30), (31) and (38) suggest that the velocity of light vibrating in a
particular direction parallel to D would have as its components in the reference frame
defined by Equation (28):
84
Chapter 5: Location of ray Paths
1
v12 =
µDκ 1
1
v22 = (5.39)
µDκ 2
1
v32 =
µDκ 3
The nonzero components of K, when referred to the special coordinate system that
led to Equations (28), can be written with Equations (38) and (39) as:
c2
κ1 = κ D
v12
c2
κ2 = κD (5.40)
v22
c2
κ3 = κD
v32
The set of Equations (40) relate the components of our tensor K to three velocities
of light through the crystal. When written as they were for Equation (28), there is one
component that is the largest possible, one that is the smallest possible. If we label the X-
axis as the direction along which D1 lies then κ1 is the tensor component of interest. If κ1
2
is assigned the smallest value, then v1 must be the fastest. But we know that c , if v1 is
v12
the fastest, is equal to α2, and κ1 is equal to κoα2. In a like manner, we find κ2 equal to
κoβ2 and κ3 equal to κoγ2. Consequently, we can write equations for E in the form:
κ Dα 2 0 0 E1 D1
0 κ Dβ 2 0 E2 = D2 (5.41)
0 0 κ Dγ 2 E3 D3
D
n= (5.42)
D•D
85
Chapter 5: Location of ray Paths
κ DE
e= (5.43)
D•D
86
Chapter 5: Location of ray Paths
e = Kn (5.44)
1
α2 0 0
0 1 0 (5.45)
β2
0 0 1 2
γ
as advertised earlier. Notice, in particular, that e and E are parallel vectors because of
Equation (43).
Nye (1957) shows that a tensor with positive principal components, such as K,
can be geometrically represented by the ellipsoid:
X 2 Y2 Z2
+ + =1 (5.46)
α2 β 2 γ 2
Hence, we have obtained our indicatrix from Maxwell’s Equations and the tensor
relationship between D and E.
n1 n n
e = Kn = i + 22 j + 32 k (5.47)
α 2
β γ
r = e × ( w × e) (5.48)
The location of the ray path with respect to the axes of the indicatrix is most
easily calculated if a unit vector parallel to r is first calculated. First, expand the triple
product in Equation (48) into a form that is easier to express in a numerical format:
r = (e • e) w - (e • w ) e (5.49)
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Chapter 5: Location of ray Paths
r
r= (5.50)
r •r
Explicitly, the two dot products in Equation (49) are given by:
Equation (50) has the components of the wave normal vector and the principal indices of
refraction as its only variables; the ni are functions of the wi and the indices of refraction
(see Chapter 2). It is the analytical expression for calculating the ray path. An example of
the calculations is shown in Table 5-1.
In summary, to find the ray paths associated with the wave normal w, first
calculate the two vibration vectors, m and n. Next calculate the two e vectors, Km and
Kn. Finally calculate the two ray paths with Equation (50).
Optical crystallography texts state that the angle between the ray path and wave
normal is small. We now have the capability of calculating this angle and determining
how small it is. The angle between w and r will equal the angle between n and e because
of the cross product relationship shown in Equation (48) [see Figure 5-1]. The angle
between e and n is most easily obtained with the dot product:
e
cosθ = n • (5.53)
e•e
Explicitly, the two dot products are given by Equation (51) and:
Equation (50) can be obtained by a second method and from which we can derive
some additional results. Consider the equation for the indicatrix written in the following
88
Chapter 5: Location of ray Paths
fashion:
X 2 Y2 Z2
f ( X ,Y , Z ) = + + (5.55)
α2 β2 γ 2
2X 2Y 2Z
∇f = i+ 2 j+ 2 k (5.56)
α 2
β γ
A vector parallel to the vibration vector that stretches from the centre of the indicatrix to
a point (X,Y,Z) on the indicatrix is given by:
N=Nn (5.57)
where N is a scalar that multiples n and gives the magnitude of N. From the definition of
the indicatrix one concludes that the value of N is equal to the refractive index of the light
vibrating parallel to n. In component form Equation (57) becomes:
X Y Z
n= i+ j+ k (5.58)
N N N
X
n1 =
N
Y
n2 = (5.59)
N
Z
n3 =
N
n n n
∇f = 2 N 12 i + 22 j + 32 k (5.60)
α β γ
Thus, we have the result that the gradient, ∇f, is parallel to the electric vector e:
∇ f = 2 Ne (5.61)
89
Chapter 5: Location of ray Paths
Consequently, this parallelism means that the angle between n and e can be calculated
from:
∇f
cosθ = n • (5.62)
∇f • ∇ f
Note that because ∇f is normal to the indicatrix surface, the electric vector is also.
These relationships are illustrated in Figure 5-4. The shaded plane is the plane of
the thin section and contains the vibration vector n. In this particular example, the thin
section is parallel to the X-axis. Consequently, the wave normal, the vibration vector and
the electric vector lie in the Y-Z plane, as does the ray path, parallel to r, in Figure 5-4.
Because ∇f is normal to the indicatrix surface, the ray path will be parallel to its tangent.
As a result, the vibration vector and the ray path vector, r, are parallel to conjugate radii
of the indicatrix, a fact described by Bloss (1961).
We can next examine the factors that control the size of the angle between the
vibration and electric vectors, θ. Any central section through the indicatrix is an ellipse,
including the section that contains the vibration, electric and wave normal vectors n, ∇f,
and w (Figure 5-5A). This plane is not the plane of the thin section; rather, the plane of
the thin section, the plane normal to w, is perpendicular to the ellipse under discussion
(Figure 5-5A). Label the major and minor axes of the ellipse containing n, ∇f, and w as P
and Q with unit vectors, p and q, along these axes:
P2 Q2
f ( P, Q ) = + =1 (5.63)
b2 a 2
where a and b are the lengths of the minor and major axes of the ellipse. The gradient to
f ( P, Q ) is:
2P 2Q
∇f = 2
p+ 2 q (5.64)
b a
n = n p p + nq q (5.65)
90
Chapter 5: Location of ray Paths
where:
P
np =
P2 + Q2
Q
nq =
P + Q2
2
Next calculate the cosine of the angle between n and ∇f with the dot product. After some
algebra the result is:
b 2 − n 2p ( b 2 − a 2 )
cos θ = (5.66)
b 4 − n 2p ( b 4 − a 4 )
The substitution of trig identities into the equation for uniaxial ray paths
(Wahlstrom, 1979):
ω2
tanψ = tan φ (5.67)
ε2
will transform it into Equation (66) with ω replacing a and ε replacing b. ψ is the angle
between the ray path and the major axis of the ellipse (Figure 5-5A). The results of the
calculations listed in Table 5-1 are plotted on Figure 5-5B. The wave normal vector, w, is
coplanar (in two planes) with the vibration vectors, n and m, and with the two ray paths,
rn and rm.
To find the maximum value of θ for our given ellipse, we calculate the derivative
of θ with respect to np and set the result to zero. After some more algebraic manipulation,
the result is:
b
n pm = (5.67)
a + b2
2
2ab
θ m =Arccos 2 2
(5.68)
a +b
where θm is the maximum value of θ for the particular ellipse, and npm is the value of np
for which θ is a maximum. You can check that θm is a maximum rather than a minimum
91
Chapter 5: Location of ray Paths
by substituting one and zero for np in Equation (66). In both cases, θ will be zero.
Because θm is greater than zero for positive values of a and b in Equation (68), θm must be
a maximum. If r represents the ratio of b to a with r greater than one, Equation (68)
becomes:
2r
θ m = Arccos 2
, r ≥1 (5.69)
1+ r
One can show by several techniques that θm increases with increasing values of r. For
any given crystal, r is largest when a is equal to α and b is equal to γ. Hence, the
maximum value for the angle between the ray path and wave normal for any given crystal
is:
2αγ
θ m = Arccos 2 2
(5.70)
α +γ
a
cos φm = 1 + n 2pm = (5.71)
α2 + β2
The common rock-forming minerals, olivine, pyroxene, amphibole, and plagioclase, have
small angles between ray paths and wave normals (approximately 0.5° to 2°). Minerals
with higher birefringences have larger angles (3° - 6°, titanite; 5.5°, strontianite and
92
Chapter 5: Location of ray Paths
aragonite). Except for the calcum-bearing chain silicates, Fe-end members of solid-
solution series have larger values for qm than do the Mg-end members. This relationship
is reversed for the calcium-bearing chain silicates because of the lower birefringences of
the Fe-end members.
A plot of φm, the angle between the Z vibration direction and the wave normal that
diverges most from its associated ray path, as a function of γ and birefringence (γ − α ) is
shown on Figure 5-6B. The wave normal and ray path will diverge most in thin sections
cut parallel to the Y vibration direction and with wave normals between 45° and 50° of
the Z vibration direction. Crystals with larger birefringences show maximum divergence
between wave normals and ray paths in sections closer to the Y-Z plane of the indicatrix.
For most rock-forming minerals, the ray path and wave normal will diverge by
less than 2°. Consequently, the approximation that the wave normal and ray path are
parallel is a good. Vector algebra provides a convenient way to calculate optical
directions in crystals.
93
Appendix: Mathematical Methods
The magnitude of a vector V we will denote by V. In Figure A-1, the length of the
arrow represents the magnitude; hence, V is the length of the arrow. The component of V
along the x-axis is obtained by projecting V onto the x-axis along a line normal to the x-
axis, giving a length, Vx. In like manner, Vy is the component of V resolved along the y-
axis. Notice particularly that the components are given by:
Vx = V cosθ x (A1)
Vy = V cos θ y (A2)
where θx and θy are the angles between the vector and the x-axis and y-axis, respectively.
In three dimensions, the components of a vector of magnitude V are:
Vx = V cosθ x
Vy = V cos θ y (A3)
Vz = V cos θ z
Practically all the vectors that we will encounter in describing the optical
properties of crystals are unit vectors, that is, vectors of magnitude one. For example, a
unit vector parallel to the x-axis of the coordinate system in use at the time will be
94
Appendix: Mathematical Methods
designated i. Unit vectors along the y-axis and z-axis will be given the symbols j, and k,
respectively. In terms of components along the coordinate axes, any vector can be
written:
V = Vx i + Vy j + Vz k (A4)
V
v= = cosθ x i + cos θ y j + cosθ z k (A6)
V
This last equation makes it obvious that the cosines of the angles between the coordinate
axes and a unit vector are the components of that unit vector. These quantities, the
cosines of the angles, are used so frequently they are given the appropriate name,
direction cosines. Any time we are given the task of finding the direction cosines of a
line, we are looking for the components of a unit vector parallel to the line. Direction
cosines and the components of a unit vector are one and the same.
Products of Vectors
We frequently need to find the angle between vectors, for example, the angle
between vectors parallel to the optic axes, 2V. This angle appears in the expressions for
the products of the two vectors. There are two kinds of products, the dot or scalar product
and the cross or vector product. If you multiply two vectors according to one set of rules,
the result is simply a number or, as it is called, a scalar. If you multiply vectors according
to a second set of rules the result or product is a vector.
One way of defining the dot product of two vectors, A and B, is:
A • B = AB cos θ (A7)
where θ (0 ≤ θ ≤ 180°) is the angle between the positive ends of A and B. A and B are, as
usual, the magnitudes of the vectors. Notice that as the term scalar product implies, the
result is a number or scalar.
95
Appendix: Mathematical Methods
A • B = Ax Bx + Ay By + Az Bz (A8)
When the vectors, a and b, are unit vectors, equations (7) and (8) become:
where cosθ ax , etc., are the direction cosines for a and b, respectively. The significance of
equation (9) lies in the fact that if we know the components of the two unit vectors we
can calculate the angle between them. For example, if we know the components of the
unit vectors parallel to the optic axes, we can use equation (9) to find 2V.
A × B = AB sin θ n (A10)
where θ (0 ≤ θ ≤ 180°) is the angle between the positive ends of A and B and n is a unit
vector normal to the plane of A and B. The question immediately arises, to which side of
the plane containing A and B does n point? By convention A, B and n are oriented
according to the right hand rule. Bloss (1971, p. 386-387) describes a rule for orienting n:
point the right thumb along A, the right forefinger along B, then bend the middle finger
of the right hand. It can only be bent towards n. Note that as advertised, A × B , is a
vector. Its direction is parallel to n and its magnitude is AB sin θ.
We often need the components of a vector that is formed from a cross product. If
we are given the components of two vectors that are to be multiplied together, then the
components of the cross product are given by a rule that looks like the expansion of a 3x3
determinant. Suppose we want the components of A × B . Then write down the unit
vectors along the coordinate axes and the components of A and B in the following
manner and in the following order:
i j k
Ax Ay Az
Bx By Bz
96
Appendix: Mathematical Methods
We next expand this expression as if it were a 3x3 determinant, using cofactors of the top
row:
A × B = ( Ay Bz − Az By ) i + ( Az Bx − Ax Bz ) j + ( Ax By − Ay Bx ) k (A11)
a × b = sin θ n (A12)
we know the components of the unit vectors, b and n, as well as the angle, θ. The
components of a are unknown. Our problem is to find the components of the third unit
vector, a. The first step towards the solution is to use the fact that if two vectors are equal,
their components referred to the same coordinate axes must be separately equal.
Combining the components of the two equations (10) and (11) provides three scalar
equations:
0 + a y bz − az by = sin θ nx
− ax bz + 0 + az bx = sin θ ny (A13)
ax by − a y bx + 0 = sin θ nz
These three equations are linear in three unknowns and can be written in matrix form in
the following fashion:
0 bz −by ax sin θ nx
−bz 0 bx a y = sin θ n y (A14)
by −bx 0 az sin θ nz
97
Appendix: Mathematical Methods
where a is the unknown unit vector whose components we wish to find. At first glance it
appears that we have essentially solved our problem; we have three equations in three
unknowns that we should be able to solve simultaneously. However, the matrix of
coefficients (i.e. the 3x3 matrix) has a determinant equal to zero. You can verify this
directly or perhaps you remember that a skew-symmetric matrix of odd order has a zero
determinant. Consequently, the three equations are not independent and we must cast
about for a replacement for at least one of them.
If we combine equations (7) and (8), after taking into account that a and b are unit
vectors, we get:
ax bx + a y by + az bz = cos θ (A15)
If we replace one equation in the set (13) with equation (15) there are three possible
matrix equations, all equivalent to each other. Replacing the first equation of the set (13)
by equation (15) gives:
bx by bz ax cos θ
−bz 0 bx a y = sin θ n y (A16)
by −bx 0 az sin θ nz
The determinant of the coefficient matrix in this equation is bx , which you can easily
show for yourself. To do this you will need to use the fact that the sum of squares of a
unit vector is one:
Solving for the three unknowns in equation (16) gives, after considerable manipulation:
These last three equations provide the components of the unknown unit vector, a, that we
are seeking.
98
Appendix: Mathematical Methods
Notice that if the angles did not have to sum to 180°, then the measured values are best,
according to our criterion, because the sum (19) would then be zero. But we do want the
angles to sum to 180° so we add the constraint in the following way:
F = S 2 + λ ( A + B + C − 180 ) = 0 (A20)
where λ is, for the moment, an unknown number, called a Lagrange multiplier. We next
find the values of A, B, and C that make equation (20) a minimum. It is shown in calculus
books that in order for a function, such as (20), to achieve a minimum, then the partial
derivatives must be zero:
99
Appendix: Mathematical Methods
∂F
= −2 ( A '− A ) + λ = 0
∂A
∂F
= −2 ( B '− B ) + λ = 0 (A21)
∂B
∂F
= −2 ( C '− C ) + λ = 0
∂C
A + B + C − 180 = 0 (A22)
Equations (21) and (22) provide four equations in four unknowns (A, B, C, and λ) that
can be solved to provide the best estimates of A, B, and C. In addition we get the bonus of
knowing λ. However, no one ever seems to put it to much use.
Transformation of Components
The solution of optical problems frequently requires that we calculate the
components of a vector in second reference frame when we know the components in an
original frame. Usually the two reference frames are the indicatrix and another tied to the
microscope. Suppose we label one reference frame by calling unit vectors along the three
axes i, j, and k. The second reference frame will be labeled with unit vectors, x, y, and z,
along its three axes. In both instances, the reference frames will be assumed to be right-
handed and Cartesian. Suppose we know the components of a vector, V, in the first
reference frame. Then we can express it as:
V = Vi i + V j j + Vk k (A23)
where the Vi are the known components of V. What we desire are the components of V in
the second reference frame. In other words, we would like to be able to write:
V = Vx x + Vy y + Vz z (A24)
Unless some or all of the axes of the first reference frame parallel the axes of the second,
the components of V in the first frame will not equal any of the components in the
second.
100
Appendix: Mathematical Methods
to know how the two frames are related. The most common method of relating two
reference frames with a common origin is to specify the direction cosines of one set of
axes in the other reference frame. For example, the unit vector x, along the x-axis of the
second reference frame, can be written as a function of the unit vectors in the first
reference frame:
where the aij are the direction cosines of x in the i, j, k frame of reference (i.e. a11 is the
cosine of the angle between x and i, a12 is the cosine of the angle between x and j, and a13
is the cosine of the angle between x and k). The same type of relationship will obtain for y
and z:
We can use the same set of direction cosines to write equations for the unit vectors in the
first frame in terms of the unit vectors in the second frame. For example, the unit vector i,
parallel to the x-axis of the second frame, can be expressed as:
Note the relationship between the aij in the equations for x and i [equations (25) and
(27)]. The remaining two equations for the first frame unit vectors are:
and:
101
Appendix: Mathematical Methods
The results can be put into a more elegant form with matrix notation:
This last matrix equation can be easily derived by substituting the three equations from
the set (28) into equation (23).
In summary, the matrix of direction cosines in equation (27) and its transpose can
be multiplied by the appropriate set of vector components to produce the components in
the alternate reference frame. The matrix method of transforming components can be
conveniently programmed for a computer but is not the simplest method available.
Because the sum of squares of the direction cosines is equal to one, there are only three
independent quantities in the direction cosine matrix (i.e. both the sum of squares of the
elements of each row and column of the cosine matrix must equal one). The three
independent quantities can be chosen in several ways. One way to specify the three
independent quantities is with Euler angles as described in Chapter 3.
102
Appendix: Mathematical Methods
∂ ∂ ∂
∇= i+ j+ k (A30)
∂x ∂y ∂z
∂φ ∂φ ∂φ
∇φ = i+ j+ k (A31)
∂x ∂y ∂z
φ = x+ y+ z−c (A32)
A drawing of the surface represented by φ ιs shown on Figure A-2. The gradient of this
example function is:
∇φ = i + j + k (A33)
where A1, A2, and A3 are the components of A along the coordinate axes. ∇ • A is called
the divergence and is a scalar. As a simple example, suppose A is given by:
A = xi + y j + zk (A35)
103
Appendix: Mathematical Methods
∇ • A = 1+1+1 = 3 (A36)
a scalar as promised.
∂A ∂A ∂A ∂A ∂A ∂A
∇× A = 3 − 2 i + 1 − 3 j + 2 − 1 k (A37)
∂y ∂z ∂z ∂x ∂x ∂y
where, as before, the Ai are the components of A along the coordinate axes. Again, a
simple example to show the properties of ∇ × A will suffice. Suppose A is given by:
A = − yi + xj (A38)
∇ × A = 2k (A39)
The vector A is shown schematically in Figure A-3, along with ∇ × A . The last quantity,
∇ × A , is called the curl of A.
Operations with ∇ can be combined in several ways to produce equations that are
commonly called identities, analogous to trig identities. A short list of the identities
needed in the text are listed in Table A-1.
104
References Cited
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Rock-Forming Minerals [4th ed.]: Stuttgart, Germany, E. Schweizerbart'sche
Verlagsbuchhandlung (Naglele und Obermiller), v. 1, 188 p.
---, 1971, Crystallography and Crystal Chemistry [1st ed.]: New York, Holt, Rinehart and
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---, 1981, The Spindle Stage. Principles and Practice: Cambridge, Cambridge University
Press, 340 p.
Burden, R. L., Faires, J. D., and Reynolds, A. C., 1981, Numerical Analysis [2nd ed.]:
Boston, Prindle, Weber & Schmidt, 598 p.
Burri, C., 1956, Charakterisierung der Plagioklasoptik durch drei Winkel und Neuentwurf
des Stereogramms der optischen Orientierung fur konstante Anorthit-Intervalle:
Schweiz Mineralogische un Petrographische Mitteilungen, v. 36, p. 539-592.
Burri, C., Parker, R. L., and Wenk, E., 1967, Die optische orientierung der plagioklase:
Basel, Switzerland, Verlag Birkhauser, 333 p.
Daly, R. A., 1899, On the optical characters of the vertical zone of amphiboles and
pyroxenes; and on a new method of determining extinction angles in these minerals
by means of cleavage pieces: Proceedings of the American Academy of Arts and
Sciences, v. 34, p. 311-323.
Deer, W. A., Howie, R. A., and Zussman, J., 1992, An Introduction to the Rock-Forming
Minerals [2nd ed.]: Essex, England, Longman Group UK Limited, 696 p.
Gunter, M., and Bloss, F. D., 1982, Andalusite-kanonaite series: lattice and optical
parameters: American Mineralogist, v. 67, p. 1218-1228.
105
References Cited
Hoffmann, B., 1966, About Vectors: New York, Dover Publications, Inc., 134 p.
Johannsen, A., 1918, Manual of Petrographic Methods [2nd ed.]: New York, McGraw-
Hill Book Company, Inc.
Julian, M. M., and Bloss, F. D., 1987, Matrix calculation of optical indicatrix parameters
from central cross sections through the index ellipsoid: American Mineralogist, v.
72, p. 612-616.
Kaplan, W., 1973, Advanced Calculus [2nd ed.]: Reading, Massachusetts, Addison-
Wesley Publishing Company, 709 p.
Lovett, D. R., 1989, Tensor Properties of Crystals: Bristol, England, IOP Publishing Ltd,
139 p.
Marsden, J. E., and Tromba, A. J., 1981, Vector Calculus [2nd ed.]: San Francisco, W.H.
Freeman and Company, 591 p.
Meyer, S. L., 1975, Data Analysis for Scientists and Engineers: New York, John Wiley
and Sons, Inc., 513 p.
Nesse, W. D., 1991, Introduction to optical mineralogy [2nd ed.]: New York, Oxford
University Press, 335 p.
Nicholls, J., and Stout, M. Z., 1997, Epitactic overgrowths and intergrowths of
clinopyroxene on orthopyroxene: Implications for paths of crystallization, 1881
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Nye, J. F., 1957, Physical Properties of Crystals, Their Representation by Tensors and
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Phillips, W. R., and Griffen, D. T., 1981, Optical Mineralogy, The Nonopaque Minerals:
San Francisco, W.H. Freeman and Company, 677 p.
106
References Cited
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Tobi, A. C., 1963, Plagioclase determination with the aid of the extinction angles in
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Tobi, A. C., and Kroll, H., 1975, Optical determination of the An-content of plagioclases
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11.
107
OA1, OA2 = Optic Axes
Vibration Directions
CS1, CS2 = Circular Sections
c
CS2
q
OA1
CS1
q
OA2
d
Figure 2-1: Stereographic projection of a random plane through a biaxial indicatrix. The wave
normal for the vibration directions is the pole of the projection.
Z
w
Z
w3 Plane of Thin
Section
Y OA2 OA1
w2
v1 = - u1 u1
w1
Vz
v3 v u u3
-X X
(0,0)
X
A B
Figure 2-2. A. Schematic illustration of a general wave normal in the frame of reference
defined by the axes of the indicatrix. The projections of the unit vector parallel to the wave
normal, w,on the axes are the components of w in this frame of reference. The wi are equal
to the cosines of the angles w makes with the axes of the indicatrix. B. Sketch of the optic
axial plane through an indicatrix showing the unit vectors, u and v, parallel to the optic
axes. The components of these vectors are u1, u2, u3 and v1, v2, v3. Constraints on these
quantities are: v1 = -u1, u2 = v2 = 0, and v3 = u3. The positive end of the Y axis projects into
the plane of the diagram for a right-hand system of coordinates.
m
CS1 t
OA2
n
2q
u
w
s OA1
CS2
S
g n E
y
z
S
w
g S
y
Figure 2-4: Spindle stage coordinate system. The reference frame is defined by unit
vectors parallel to the x, y, z axes. E and S are angles measured by rotating the
microscope stage and spindle stage, respectively.
Z Z
c
c
1 -a 2
b a
a Y -a Y
b
X X
Z Z
b
3 a 4 a
c c
Y -a Y
b -a
X X
Z Z
c
5 6 -a
a -a b
Y Y
b c
a
X X
Figure 3-1: The six optical orientations for orthorhombic crystals. The red lines represent
unit cell vectors and the black lines represent the axes of the indicatrix. Numbers correspond
to the orientations listed in Table 3-1..
Z c Y c X c
q q q
o o o
b b b
X Z Y
a a a
Y j || b X i || b Z k || b
Figure 3-2: The three optical orientations for monoclinic crystals. Red lines represent unit cell
vectors and the black lines represent indicatrix axes.
Y x||c X
A Y
Q
Y
e B
x||c z
Z Q
Tr(010)
X z
F>0
Z
y [001]/(010)
C y [001]/(010)
X
Z
Q x||c z
e
Y
Y
F< 0
y [001]/(010)
Figure 3-3: Stereographic projections and block diagram showing the indicatrix axes, the frame
of reference defined by the twin axes of the Carlsbad, Roc Tourne, and Albite twins, and the
Euler angles relating the indicatrix axes to the frame of reference. A. Defining projection for
Euler angles. B. Block diagram corresponding to A. C. Euler angles for plagioclase feldspars
(schematic).
q = d (001)
e
c1
p = d (010)
c2
Figure 3-4: Stereographic projection showing the ambiguity in locating the c-axis in feldspars
from the locations of the (010) cleavage vector, p, and the (001) cleavage vector, q. Unit
vectors, c1 and c2 mark the possible locations of the c-axis. The unit vector a will point along
either the positive or negative a-axis. The yellow surface contains p and q. The gray surface is
(010) and is normal to p. The c-axis and the a-axis lie in (010).
c1
r
s
c2
) 1
k1 l
(h 2
1
(h
k2
l 2)
0)
(01
Figure 3-5: Stereographic projection showing the ambiguity in locating the c-axis in a
mineral with two cleavages, (h1k1l1) and (h2k2l2). The c-axis will be located at either c1 and c2
(red arrows). The cleavage surface plot as the yellow surfaces. The (010) is the gray surface.
c c
A B
h
c/l
-a/
c/l
d (hkl)
b/k
a/
h b b
a/h
b/k- a/h
b/k-
a a
h
-a/
c/l
Figure 4-1: A. Sketch of the lattice plane (hkl) in relation to the lattice vectors a, b, and c.
The two vectors in the a-b and a-c planes, (b/k – a/h) and (c/l – a/h) also lie in the lattice
plane (hkl). B. The two vectors (b/k – a/h) and (c/l – a/h) are translated to the origin.
Their cross product, d(hkl), is normal to (hkl).
40
Tr (001)
30
Tr (010)
20
Section cut normal to a-axis 94
10
Trace (010)
q 0
-10 90
Tr (010)
-20
(001)
-30
-40
0 10 20 30 40 50 60 70 80 90 100
%An
Figure 4-2: Crystallographically defined wave normals and extinction
angles in disordered plagioclase. Sections parallel to a cleavage, (001),
lower curve, have a wave normal perpendicular to (001), a prominent
cleavage surface. In sections cut normal to a lattice direction defined by
the intersection of the (001) and (010) cleavage planes, upper curve, the
wave normal is parallel to [001], the a-axis.
w19 = -p
w10
w9
w7
(010)
[001]
w5
w3 d (hkl)
w1 = p
[001]/(010)
Figure 4-3: Sterographic projection of a set of evenly spaced wave normals that lie in the
plane (hkl). d(hkl) is a unit vector parallel to the pole to the plane. The first wave normal of
the set is equivalent to a unit vector p derived from the cross product d(hkl) x d[001].
180
160
An0 An50 An100
140
Wave Normal Direction in (010)
120
100 14.5°
80
60
40
20
0
-20 -10 0 10 20 30 40 50 60
Extinction Angle, fast^Trace (010)
Figure 4-4: Plot of extinction angle between the fast direction and the trace of (010)
for three compositions in the disordered plagioclase series. The wave normals all lie in
(010) [i.e. thin sections cut normal to (010)]. Red lines mark two hypothetical
extinction angles in two individuals of a Carlsbad twins. The Carlsbad twin forces the
location of the wave normals to be symmetric about the Carlsbad twin plane (90°
position) andthe composition to fall on the same compositional contour.
m
Figure 4-5: A. Carlsbad twin relations. The Carlsbad twin axis is [001] and the twin plane is
normal to the twin axis. The twin plane is represented by the yellow plane and acts to reflect the
upper crystal to the lower crystal. The individual parts of the twinned crystal meet along the
composition plane, in this drawing (010). Ellipses (Black) represent the intersection of the
indicatrix with the crystal face (schematic). B. Schematic depiction of extinction positions in an
arbitrary section normal to (010).
-15 -10 -5 0 5 10 15 20 25 30 35
180
40
160
a
Wave Normal Angle in Zone (010)
45
140
50
120
55
100
60
c
80 35
60
40
0 5 10 15 20 25 30
-5
20
-10
35
0
0 10 20 30 40 50 60 70 80 90 100
Mole %An
Figure 4-6: Contours of plagioclase extinction angles between the fast direction
and the trace of (010) in sections cut normal to (010).The locations of the a-axis,
c-axis, and the normal to the (001) cleavage plane are indicated on the left side of
the diagram. The origin of the y-axis has a wave normal parallel to [001]\(010).
The location of the trace of the Carlsbad twin plane is located at 90 . Contours
were drawn with a spline interpolation algorithm (Price, et al, 1992) through the
points marked with squares. Points were calculated with Optics.exe.
Wave Normal Angle in Zone (010)
Mole %An
0 10 20 30 40 50 60 70 80 90 100 -15 -10 -5 0 5 10 15 20 25 30 35
180
35
80 40
160
a
60 45
140
50
40
120
55
20
35
100
60
c
0 m
c
A 80 35
60
40
20
0
0 10 20 30 40 50 60 70 80 90 100
Mole %An
35
C
B
Figure 4-7:The relationship between the extinction angle diagram and the Carlsbad twin. The lower
part of Figure 4-6 is reflected across the line at 90° on the y-axis of the chart (B). The reflected part is
then moved to overlap the upper part of the diagram (A). The twin is reflected across the Carlsbad twin
plane and then placed alongside the original (C).
-15 -10 -5 0 5 10 15 20 25 30 35
Angle of Wave Normal in Zone (010)
0 180
40
20 160
a
45
40 140
50
60 120
55
80 100
60
c
0 10 20 30 40 50 60 70 80 90 100
M ole % A n
Figure 4-8: Determinative chart for disordered plagioclase that display a Carlsbad
twin. The contours all meet at point that represents the position and composition of
the plagioclase that has an optic axis in (010).
[001]
[102] [101]
[201]
[101] [100]
Figure 4-9: Lattice directions in (010) that can be usedas wave normal directionsto calculate
extinction anglesin (010). The calculated extinction angles can be entered in an interpolation
algorithm to obtain fixed, interger values for extinction angles.
w19 = -p
w10
w9 [001]
^(010)
w7
w5 d [uvw]
w3
w1 = p
^[001]/(010)
v
s
d c=x z
n
k
e
t Vectors
in section
u parallel to (010)
w
f
y k c = xv
u Vz
q
y = ^(100)
Figure 4-11:Stereographic projection of the optical elements and crystallographic
directions of a monoclinic crystal with Y = b. The vibration directions and wave
normal are drawn for a thin section cut parallel to the c-axis, [001]. f is the angle
between the wave normal and the pole to (100).
90
fm = 0
(-)
60 15
45
Vz 90
30
(+)
0
-90 -60 -30 0 . 30 60 90
Pyroxenes q
Amphiboles
Figure 4-12: Vz versus q, the extinction angle in (010) for monoclinic crystals with Y = b.
Contours in fm, the angle between the pole to (100) and the wave normal that produces
the maximum extinction angle in the zone [001]. Points outside the shaded areas have
maximum extinction angles at f = 90°, which are sections parallell to (010). Several
points are shown for amphiboles and pyroxenes.
Circles - Data from Deer, et al. (1966).
Triangle - Data from Su and Bloss (1984).
60
4
5
30
1
6
d 0
2
3
-30
-60
0 30 60 90 120 150 180
f
w = ^(100) w = ^(010) w = ^(-100)
Curve Vz q Curve Vz q
1 60 15 4 45 45
2 72 -15 5 30 40
3 60 -30 6 __ 0
Figure 4-13: Examples of extinction angle curves in the zone [001] for monoclinic crystals
with Y = b.
: Point where the curve is mathematically undefined.
6
90
3 2
60 1
30 5
0
-90 -60 -30 0 30 60 90
q
Figure 4-14: Vz versus q, the characteristic extinction angle in (010) for monoclinic
crystals with Y = b. Contours are in degrees for the maximum extinction angle in the zone
[001]. Numbered points correspond to numbered extinction angle curves on Figure 4-13.
OA
OAP
OAP
OA
TS
e Z
ac
c Tr c Z'
Z'
Z TS
e
ac
Tr OA
OA
w w
1 f 2 f
OA
OAP
OAP
TS
e
ac
Tr
Z Z'
c c = OA
TS
OA Z'
ce
Z
Tra
w
w
3 OA
f 4 OA
f
TS
OAP
e
ac
Tr
c OA
Z'
Z
OA
w
f
5
Figure 4-15: Stereographic projections of crystals with the types of
extinction angle curves shown on Figure 4-13. Numbers correspond to the
curves labeled with the same number on Figure 4-13.
11) Fo
(1 Fa
e
rac
T X
Trace (010)
OAFa OAFa
(111)
OAFo OAFo
Z
Figure 4-16: Stereographic projection of the optical elements of the
olivine end members forsterite (Fo) and fayalite (Fa). The calculated
extinction angle between the fast (X’) direction and the trace of (010) in
the plane (111) is shown for each end member.
140
130
120
2Vz 110
100
90
80
0 25 50 75 100
Mole % Fa
Figure 4-17: 2Vz versus composition for olivine solid solutions.
21)
Tr(0
116 o
Tr (021) )
Tr (021
Tr(
102o
021 Y
Y 132 o
Tr )
1)
Tr(02
(010
100o
Tr
)
(02
Y
1)
Trace 70
(021)^(021)
in OA 60
Sections
50
0 25 50 75 100
Mole % Fo
Figure 4-19: Plot of the angle between the traces of the faces in the form
{021} as seen in sections cut normal to an optic axis of a member of the
olivine solid solution series.
Z Opx =c Opx
cCpx Vz OA
Trace (100)
(001)
Opx
(001)
e
git
(010)
(010)
Z
Au
a
Au
X
A B
Figure 4-20: A. Sketch of clinopyroxene overgrowth on orthopyroxene from the 1881 Mauna
Loa tholeiite basalt. B. Orientation of orthopyroxene and augite crystals in position of epitaxic
growth. The (100) faces of the two crystals coincide.
Section S5 S8
|| (010) 90
Di Hd
S5 S8
80
Pg
70
En Fs
En50
60
Vz Opx
or 50
j
w^c in 40
(100) Cpx
30
En100
20 Di
Hd
10
Pg
Section
0
^ [001] 0 10 20 30 40 50 60
X'^Tr(100) in Cpx
Figure 4-21: Extinction angles for clinopyroxenes in epitaxic overgrowths on orthopyroxene in sections
cut normal to the common (100) plane. The gray area delineates values that can be measured in sections
cut normal to an optic axis of orthopyroxene. The star marks the location of the coordinates on the graph
from an overgrowth found in the 1881 lava flow from Mauna Loa. Inset shows the compositions of the
clinopyroxenes for which the curves were drawn (Nicholls and Stout, 1997).
Figure 5-1: Schematic diagram showing the relationships between electromagnetic vectors.
E is the vector representing the electric field, D is parallel to a vibration direction, w is aunit
vector parallel to the wave normal. H is normal to the plane defined by E and w. R is parallel
to the ray path and is defined by ExH.E, D, and w are coplanar.
y'
y x
Vx
Vy' q
V
x'
Vx'
Figure 5-2: Diagram showing that the values of the components of a vector change with
change in coordinate system but the direction and magnitude of the vector do not. In the
primed coordinate system, the vector, V, has the components V’x and V’y, neither equal to
zero. In the unprimed system, the components of V are Vx = |V| and Vy = 0.
D = E1 i + 2E2 j = K E
E3 1 0 0
K = 0 2 0
0 0 0
E1
E2
D
2E2
qx
qy
X Vx
Figure A-1: Decomposition of a vector into its components along the x-axis and y-axis. The vector, V, lies
in the x-y plane. Hence, its component along the z-axis is zero.
Z
F = f(X,Y,Z)
F
X
Figure A-2: Illustration of the gradient of a function, f, defined by f = x + y + z - c.
Z
A A
A A
A
A Y
A
A A
A
A
A
X
Figure A-3: Diagram showing the form of the curl of a vector function, A, and the function itself. The
vector function is: A = - y i + x j.