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PRE-MEDICAL
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PRE-MEDICAL
CAREER POINT .
bonds 4 3 2 2
bonds 0 1 2 2
3. CLASSIFICATION OF CARBON There are four types of carbon present in organic compounds. The carbon which is directly attached with one, two, three and four carbon atoms are known as primary, secondary, tertiary and quarternary carbon atom respectively. On the basis of carbon atom, hydrogen atoms bonded with 1, 2 or 3 are named as primary, secondary or tertiary hydrogen atom respectively.
3C 1C
4C
CCCCC 2C C C
Saturated
Aromatic
Benzenoid
Non-benzenoid
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CAREER POINT . SPECIAL POINTS : Saturated compounds having carbon-carbon single bonds. e.g. CH4, CH3CH3, CH3CH2CH3 Unsaturated compounds having atleast one carbon-carbon multiple bond (= or )
PRE-MEDICAL
e.g. CH2=CH2, HCCH, HCCCH3, H2C=CHCH3, CH2=C=CH2, CH2=CHCCH, HCCCCH Homocyclic compounds having similar types of atoms in the complete cycle. Whereas heterocyclic compounds having atleast one different atom (O, S, N) in the cycle. Alicyclic = Aliphatic + homo/hetero cyclic (Alipher = Fats)
O
O
O O O NH O
e.g.
Homocyclic
Heterocyclic
Aromatic compounds having sweet smell (aroma), cyclic resonance and follow Huckle's rule (4n + 2 = electrons) e.g. Benzenoid compounds :
Benzene Naphthalene
Biphenyl
Anthracene
Phenanthrene
O Furan
NH
N Pyridine
Thiophene Pyrrole
5. HOMOLOGOUS SERIES The organic compounds which are structural ly similar having same functional groups, combinedly gives a series known as homologous series and the members as homologues. The homologous series is characterised by : (i) The two adjacent members are differ by a CH2 group or 14 atomic mass unit. (ii) All the members of a series have same general formula, general methods of preparation and similar chemical properties due to same functional group. (iii) The homologues shows difference in physical properties due to change in molecular mass and structural arrangement of molecule.
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PRE-MEDICAL SOME STANDARD HOMOLOGOUS SERIES ARE : S.No. 1. 2. 3. 4. 5. 6. 7. 8. Name of Series Alkane Alkene Alkyne Halo alkane Alcohol Ether Aldehyde Ketone General Formula CnH2n+2 CnH2n CnH2n2 CnH2n+1X CnH2n+2O CnH2n+2O CnH2nO CnH2nO I-homologue CH4 CH2=CH2 HCCH CH3X CH3OH CH3OCH3 HCHO
CH3CCH3 O
CAREER POINT .
9. 10.
CnH2nO2 CnH2nO2
HCOOH
HCOCH3 O
CH3COOH
HCOCH2CH3 O
or CH3COCH3
O
11. 12.
CnH2n+1NO CnH2n+1NO2
HCONH2
O CH3N O
CH3CONH2
O CH3CH2N O
13.
Amine
CnH2n+3N
CH3NH2
CH3CH2NH2
6. NOMENCLATURE OF ORGANIC COMPOUNDS Mainly three system are adopted for naming of an organic compound : (a) Common Name or Trivial Name System (b) Derived Name System (c) IUPAC Name or Jeneva Name System 6.1 SOME COMMON NAMES BASED ON SOURCE : S.No. 1. 2. 3. 4. Compound CH4 CH3OH CH3CH2OH
NH2CNH2 O
Common Name Marsh gas (Fire damp) Wood spirit (Carbinol) Grain alcohol Urea (Carbamide)
5.
HCOOH
Formic acid
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9. 10.
CH3CH2CH2COOH
HOCHCOOH HOCHCOOH
Butter Tamarind
11. 12.
HOCHCOOH CH2COOH
6.2 SOME STANDARD COMMON NAMES (TO BE REMEMBER) : S.No. 1. Common Name Isoheptane or Triptane Structure Formula
CH3 CH3CHCCH3 CH3 CH3
2.
Isooctane
3. 4. 5. 6. 7. 8. 9. 10.
Ethylene Acetylene Allylene Crotonylene Allene Ketene Acetone or Dimethyl Ketone Pavaldehyde
11.
Chloral
Cl3CCHO
Classification & Nomenclature
5
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PRE-MEDICAL S.No. 12. 13. Common Name Acrolein or Acryl aldehyde Acetophenone or Methyl phenyl Ketone
CH3C O
14.
C O
15.
Pinacol
16.
Pinacolone
17.
CH3C=CHCCH3 CH3 O
18.
Oxalic acid Malonic acid Succinic acid Gluteric acid Adipic acid Pimelic acid
25.
Maleic acid
HCCOOH HCCOOH
(Cis)
26.
Fumeric acid
HCCOOH HOOCC H
(Trans)
Cyanic acid Isocyanic acid (Tautomer of cyanic acid) Isourea (Tautomer of urea)
HOCN O=C=NH
H2NC=NH OH
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CAREER POINT . S.No. 30. 31. 32. Common Name Chloroform (Anaesthatic agent) Chloropicrin (Nitro Chloroform) Chloretone (Chloroform + acetone)
33. 34.
CCl4
C=C H Cl
35. 36.
Cl Cl
Cl Cl
CH CH
C=C Cl Cl
Cl Cl
37. 38.
39.
CH2=CHCOOH CH3CH=CHCOOH
CH=CHCOOH
CH2OH CH2OH
44.
Glycerol
45.
ClCCl O
46.
Glyceraldehyde
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48.
Glyoxal
CHO CHO
49. 50.
Glycine -Alanine
H2NCH2COOH
H2NCHCOOH CH3
Tilden reagent Grignard reagent Frankland reagent Hinsberg reagent (used in N-compounds) Mustard Gas (Explosive used in I-world war) Lewisite (Explosive used in II-world war) Semicarbazide Schiff's Base or Anil Methylal
ClCH2CH2SCH2CH2Cl ClCH=CHAsCl2
H2NNHCNH2 O
RCH=NR
CH3CH OCH3 OCH3
OCH2CH3 OCH2CH3
60.
Ethylal
CH3CH
R H
R R
C
C
SR SR
SR SR
RSH RSR
CH3 CH3
H 3C
66.
Toluene
CH3
Classification & Nomenclature
8
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CAREER POINT . S.No. 67. Common Name Cummene or Isopropyl benzene Acetanilide
68.
CH3CNH O
69.
Benzanilide
CNH O
NHNH
COOH COOH
75.
Phthalic anhydride
CO CO
CO CO
76. 77.
NH
COOH NH2
78.
SO3H NH2
79.
COOH OCCH3 O
OH COCH3 O
80
Salol (Antiseptic)
81
Oil of wintergreen
OH COPh O
82. 83.
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PRE-MEDICAL S.No. 84. 85. 86. Common Name o-Toluidene p-Benzoquinone Gammexane or Lindane or BHC (Benzene hexachloride)
Cl Cl Cl
Cl Cl Cl
OH CHO OH COOH
(Alicyclic)
OH NO2 NO2
CH3
SO2Cl
CH=CH2
CH3 CH3
n-Butane CH2=CHCH2CH3
Isobutylene -Butylene -Butylene SPECIAL POINTS : prefix "n" is used for unbranched carbon chain. prefix "iso" is used when one methyl group is attached on 2nd carbon from either terminal prefix "neo" is used when two methyl groups are attached on 2nd carbon from either terminal. Prefix "/" is used to locate the position of double bond.
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PRE-MEDICAL
Neopentyl
t-Pentyl
Active pentyl
Benzal or Benzylidene
Benzo or Benzylidyne
C
Classification & Nomenclature
11
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PRE-MEDICAL
CAREER POINT .
6.5 COMMON NAMES OF HYDROCARBON DERIVATIVES : For systematic common names of these compounds we are dividing whole functional groups in following two systems : 6.5.1 SYSTEM - I : In this system prefix is decided by hydrocarbon radical (as discussed above) and suffix is given by following table: S. No. 1 2 3 4 5 6 7 8 9 10 e.g.
CH3CHSO3H | CH3 Isopropyl sulphonic acid
Suffix sulphonic acid alcohol thioalcohol amine ether thioether halide ketone cyanide isocyanide
CN
N ==C
* CH3 CHCHCH3 | | CH3 NH2 Active isopentyl amine or Active isoamyl amine
CH3OCH2CH3
CH3N=C
Methyl isocyanide
CN
CH2=CHSCH2CCH
CH
CN
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CAREER POINT . 6.5.2 SYSTEM II : In this system prefix is decided by total number of carbon atoms in the compound If total carbon Prefix One Form Two Acet Three Propion Four Butyr Five Valer
PRE-MEDICAL
C OR || O
N ==C
oisonitrile
O || CH3C
O
SPECIAL POINTS :
Prefix "Acryl" is used for the compounds which have total three carbon atoms and double bond is on 2nd carbon. (only for system II groups) e.g CH2 = CHCOOH CH2 = CHCHO CH2=CHCONH2 (only for system II groups) e.g CH3CH = CHCOOH CH3CH = CH CHO CH3CH = CH COCl Crotonic acid Croton aldehyde Crotonyl chloride
Classification & Nomenclature
13
Prefix "Croton" is used for the compounds which have total four carbon atoms and double bond is on 2nd carbon
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CAREER POINT .
Prefix "Pyruv" is used when CH C is directly attached with (system II) functional groups. 3 O e.g. CH3CCOOH CH3CCHO CH3CCOBr CH3CCONH2 O O O O Pyruvic acid Pyruvyl bromide Pyruvamide Pyruvaldehyde CN and NC groups are considered in both systems.
e.g.
System (I)
CH3CHN= C | CH3
System (I)
System (II)
CH3CHCN | CH3
System (II)
System (I)
System (I)
CH2=CHCN
System (II)
CH2=CHN= C
System (II)
According to this system name of any compound is given according to the representative compound of the homologous series. This system is reserved for following homologous series :
Series Name of Homologous series Name of Representative compound Structure of group
1 2 3 4 5. 6. 7. 8.
Alkane Alkene Alkyne Alkanol Alkanal Alkanoic acid Alkanoyl halide Alkanamide
Methane Ethylene Acetylene Carbinol Acetaldehyde Acetic acid Acetyl halide Acetamide
>C=C< CC
C OH C CHO C COOH C COX
| C CONH2 | CC C O
9.
Alkanone
Acetone
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PRE-MEDICAL
H | CH3 CH2 C CH3 | CH3 Ethyl dimethyl methane H | CH3CH2COH | CH3 Ethylmethyl carbinol H O | || CH3C COH | CH3 Dimethyl acetic acid
CH3 CH3 C=C CH3 H
H | CCHCH3 | | H CH3
C=C
CH3 CH3
C=C
C=C
CH3 CH3
CH3CCCH3 Dimethyl acetylene
Trimethyl ethylene
Tetramethyl ethylene
(International union of pure and applied chemistry) 8.1 Parts and format of IUPAC name :
Secondary prefix + Primary Prefix + Root word + Primary suffix + Secondary suffix
It represents substituents It is used in cyclic It represents number of or branches compounds (cyclo) carbon atoms in selected principle carbon chain
It represents saturation or unsaturation in principle carbon chain e.g. ane, ene, yne
8.2 Rules for IUPAC nomenclature : Rule 1 : Select the longest continuous chain of carbon atoms which have maximum number of substituents, multiple bonds and functional groups. Priority order : Functional group > Multiple bond (= or ) > Substituent Rule 2 : Selected principle carbon chain is numbered from the side where substituent or multiple bond or functional group is nearer (lowest possible number): Priority order : Functional group > Double bond > Triple bond > Substituent e.g. CH3 | 2 3 4 3 2 1 7 6 5 4 3 CH3CHCCH2CH3 CH3CHCH2COOH CH3CH2 CH2CH2CHCH3 || | CH2 4 CH2 CH2CH3 1 2 1 5 CH3 2-Isopropy but-1-ene 3-Methyl heptane or 3-Methyl pentanoic acid 2-Methyl ethyl but-1-ene
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PRE-MEDICAL
CAREER POINT .
SPECIAL POINTS : If the compound contain more than one similar alkyl groups, their positions are indicated separately and an appropriate numerical prefix di, tri, tetra......, is attached to the name of the substituent. The positions of the substituents are separated by commas CH3 CH3 CH3 CH3 1 2 3 4 CH3 C CH2 CH5CH3 e.g. 1 CH32CH3CH4CH25CH3 CH3 2,3 Dimethyl pentane 2,2,4- Trimethyl pentane
If there is different alkyl subsitituents present in the compound, their names are written in the alphabetical order. However, the numerical prefixes such as di, tri etc, are not considered for the alphabetical order. For example , C2H5
1
If two different alkyl groups are located at the equivalent positions, then numbering in the carbon chain is done in such a way that the alkyl group which comes first in alphabetic order gets the lower position. C2H5 CH3
1
CH32CH23CH4CH5CH26CH3 3 Ethyl-4-methylhexane
If a compound has two or more chain of the same length, then principle chain is selected in such a way that greater number of substituent works as prefix. 5 CH34CH23CHCH2CH3
2 1
CHCH3
CH3 3 Ethyl -2- methyl pentane In case some functional group (other than C=C and C C) is present in molecule, it is indicated by adding secondary suffix after the primary suffix. The terminal e of the primary suffix is generally removed before adding the secondary suffix. The terminal e of the primary suffix is removed if it is followed by a suffix begining with a, i, o, u or y .
e.g.
Some of functional group always works as prefix Functional group Prefix name
X OR CC
O NO2
NO
3 2 1 CH3CH2CH2OCH3 1-Methoxy propane
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CAREER POINT .
PRE-MEDICAL
If the molecule contains more than one dissimilar functional groups, the numbering of the parent chain is done in such a way that the functional group of higher priority gets the lower number. The order of priority of various groups for the sake of numbering is given in following table :
S.No. 1 2 3 4 Functional group
COH || O
Prefix carboxy sulpho alkoxy carbonyl or carbaloxy halo formyl or halo carbonyl
Suffix oic acid sulphonic acid oic anhydride alkyl ....... oate
SO3H
COC || || O O
COR || O
CX || O
oyl halide
6 7 8 9 10 11 12 13 14 15 16 17 18 e.g.
CNH2 || O CN r N= C
CH || O C || O OH SH NH2
carbamoyl or amido cyano carbyl amino or isocyano formyl or oxo keto or oxo hydroxy mercapto amino alkoxy halo nitro
O C=C CC X NO2
Suffix CH3 | 4 CH33C2C1CH3 | || OH O
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PRE-MEDICAL 8.3 Sometimes a special suffix is used for given functional groups : S.No. Functional group Suffix 1 COOH Carboxylic acid 2 COOR Alkyl . carboxylate 3 COX Carbonyl chloride 4 CONH2 Corboxamide 5. CN Carbonitrile 6. NC Carbo isonitile 7. CHO Carbaldehyde
CAREER POINT .
It is used in acylic compounds when 3 or more functional groups are presents. e.g. CH2 CH CH2 CH2 CH CH2 CH CH3 | | | | | | COOH COOH COOH CHO CHO CHO Propane 1,2,3,-tricarboxylic acid
CN CH3CCH2CH2 CN CN
Butane-1,3,3-tricarbonitrile
e.g.
3-Cyanomethyl pentane-1,5-dinitrile
It is used in cyclic compound when functional group is directly attached to the cycle.
COOH
COCH2CH3 O
Cl
C O
Cl
CHO CHO
Cyclohexane-1,2,4-tricarbaldehyde
NH2 CONH2 3-Amino benzene carboxamide or 3-Amino benzamide
Names of alicyclic compounds are given by putting another prefix cyclo before the root word which depends upon the number of carbon atoms in the ring. The suffixes ane, ene or yne are written depending upon saturation or unsaturation in the ring.
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CAREER POINT .
PRE-MEDICAL
If some substituent or functional group is present, it is indicated by some appropriate prefix or suffix and its position is indicated by numbering the carbon atoms of the ring. The numbering is done in such a way so as to assign least possible number to the functional group or substituent in accordance with the rules already discussed.
e.g.
OH 1 2 3
NO2 3
Cyclohexane
CH3 3 2 CH 3
Cyclopentene
CH3 C2H5
CH3 3-Methylcyclo-hexanol
O 1 2 3 OH
CH3 1-Methyl-3-Nitrocyclohexene
4 3 2 1 CH3CHCH=CH2
2 1
1 2,3-Dimethylcyclopentene
1-Ethy-2-Methylcyclobutene
3-Hydroxycyclohexanone
3-Cyclopentyl-1-butene
In this representation of organic molecules, carbon and hydrogen atoms are not shown and the lines representing carbon carbon bonds are drawn in zig-zag manner. A single line () represents a single bond, two parallel lines (=) represents a double bond and three parallel lines () represent a triple bond. The only atoms specitically written are those that are neither carbon nor hydrogen bound to carbon. The intersection of lines represent carbon atoms carrying appropriate number of hydrogen atoms.
e.g.
2
2 1 2
4 5
Methylpenta-1,3-diene
5 4 6-Ethyl-1-methylcyclohexa-1,3-diene
2 3
1 6
1 OH O 5 6 2,6-Dimethylhept-2,5-dien-oic acid 3 4
2 1 3
4 5
Hexa-1,3,5-triene
4 5 Pent-1-en-3-ol
23 OH
Br 2 1
5 O 2-Bromopentan-3-one
Saturated bicyclic systems having two or more atoms in common are named by prefixing bicyclo to the name of the cyclic parent hydrocarbon system containing the same total number of carbon atoms in the skeleton. The number of carbon atoms in each of the three bridges, connecting the two tertiary carbon atoms is indicated in parentheses, in descending order and arabic numerals are used to indicate the number of carbon atoms and the numbers are separated by full stops.
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PRE-MEDICAL
CAREER POINT .
The bicyclic system is numbered starting with one of the tertiary bridging cabon and proceeding through longest bridge to the second bridging carbon continuing back to the first bridging carbon through the second longest chain. Numbering is completed by numbering the shortest bridge beginning with the atom next to the first bridging carbon.
e.g.
1 6 5 4 2 3
7 6 5 1 2 8 9 3 4
Spiro bicyclic hydrocarbons contain two rings consisting of carbon atoms only and the two rings are linked by a common carbon. These compounds are named by placing prefix spiro before the name of the acyclic parent hydrocarbon with same number of skeletal carbon atoms. The numbers of skeletal atoms linked to the spiro atom are indicated by arabic numbers, separately by a fullstop. The numbers are written in ascending order and enclosed in square brackets. Numbering of a spiro bicyclic hydrocarbon starts with a ring carbon next to the spiro atom and proceeds first through the smaller ring and then through the spiro atom and around the second ring. For example : e.g.
1 2 3 7 4 6 5
8 9 10 1 2 CH3 5 7 6 4 3
Spiro [2,4]
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