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Current position:
Professor of plant breeding (Emeritus), Orissa University of Agricultural Technology (OUAT), India IRRI consultant (2010-2012)
Achievements:
Released 49 high yielding rice varieties for Orissa during 1980-2012. These varieties currently cover more than 70% of the rice area in the state. Some of these varieties are widely grown in other states of India Pratikshya a newly released variety has replaced Swarna
Achievements (contd) OR 142-99 (Santepheap-3) released in Cambodia via INGER OR 1128-7-1 (ADT-44) released recently in Tamil Nadu. Contributed to collection, evaluation and maintenance of nearly 100 indigenous aromatic rices of Orissa Handled research projects on Genetic yield enhancement of aromatic short grain rices for higher productivity and export which led to the release of two varieties: Nua Kalajeera and Nua Acharamati. Awards and distinctions: Rao Bahadur Dr.Ram Dhan Singh Memorial Trust Award (2003) from Haryana Agricultural University as the Best Rice Scientist Dr. R.B. Ekbote Prize from Maharashtra Association for Cultivation of Science, Pune (2006) for his significant contribution in rice research. Senadhira Rice Research Award (2012), awarded by IRRI for outstanding contributions to rice research and international cooperation in rice varietal development.
Breeding approaches for varietal improvement in rice with special reference to genetic yield enhancement and stability and Reflections on 35 years of rice breeding in eastern India PROF. S. R. DAS
Introduction
By the adoption of semi dwarf rice varieties coupled with improved management practices, there was spectacular advance in rice production during last four decades. Incorporation of a series of resistant genes conferring resistance, tolerance to biotic and abiotic stresses into the breeding populations the yield level has been stabilized.
Area
0.87 0.41 0.65 0.00
Production
1.88 3.55 2.00 1.72
Yield
1.01 3.14 1.34 1.72
90-99
2000-2011
-0.58
0.27
0.81
0.98
1.39
0.71
South Asia
60-69
70-79 80-89 90-99
1.09
0.93 0.31 0.61
1.67
2.11 3.09 2.11
0.58
1.18 2.77 1.49
2000-2011
0.36
2.11
1.75
90-99
2000-2011
1.71
0.87
2.72
1.81
1.02
0.93
Asia
60-69
70-79 80-89 90-99
0.95
0.69 0.19 0.62
3.29
2.36 2.59 1.70
2.35
1.67 2.40 1.09
2000-2011
0.51
1.60
1.09
East Asia
South Asia
2030
239.0
3.49
The targeted projection of production (mt) and yield (t/ha) in Asia and India Regions Asia Period 2011 2020 2030 Production 416.6 549.0 682.0 Yield 2.95 3.72 4.43
India
Important rice improvement programs in India as well as at IRRI, have not made any significant increase in the genetic yield potential of varieties released after IR 8 If we fail to stabilize the yield growth level at least at where we stand today, then it may not be possible to sustain the self-sufficiency and surplus in rice. Plant breeders today argue that, there is no evidence of yield plateau for any crop including rice A perfect variety has yet not been evolved Still there is an unexploited genetic variability for improving the direct and indirect components of yield through utilization of untapped germplasm There is still scope to develop and use more efficient breeding and selection techniques for yield improvement in rice.
Mating system
Biparental crosses are widely used in rice varietal improvement programmes to serve the purpose of combining simply inherited traits from two parents The recombination possible from biparental crosses are too restrictive to make rapid improvement in a selfing species like rice. The use of multiple crosses as suggested by Harlan, Martini and Stevens (1940) involving 16-32 parents which are crossed in successive generations until the final hybrid involve all the parents Theoretically the multiple crosses provide an opportunity for recombination of genes from many parental strains by intermating F1s in successive generations.
Assuming a multiple cross with 16 parents each of which carrying one favourable gene the number of hybrid seeds in each generation ensuring a 50:50 probability of retaining all the 16 genes in one plant in the final generation would be 8, 64, 131000, 640004 in the 1st, 2nd,3rd and final generations respectively
The second practical limitation was suggested by Mackey (1954) that by using 16-32 parents in a multiple crossing programme will force the inclusion of number of unadapted strains, which are likely to disrupt the good genetic background of varieties that took several years even decades to assemble therefore suggested modified backcrossing programmes to obtain optimum parental lines and each unadapted parent should be crossed and backcrossed to an adapted variety before its use in a multiple crossing programmes.
Many rice breeders have not used multiple crossing programmes for varietal improvement in rice because they got adequate success through careful manipulation of biparental progenies. However, the limited success achieved through various mating schemes employed in rice is primarily due to the requirement of large number of F1 seeds relatively small sample size in F2, where the full range of yield is not realized. A majority of breeders have restricted their selection to known material and have made intense efforts for local adaptation as a result certain gene blocks are rapidly fixed along with correlated response which in many cases are adverse in direction. Therefore, it is suggested to chose the parent on the basis of wide genetic base with acceptable level of productivity high general combining ability before their use in a multiple crossing programme for realization of high and stable yields in rice.
Generally samples of individuals or progenies are selected from plus and minus portions of the frequency distribution and only plus and minus matings are made.
Over cycle of disruptive matings, it is seen that the population mean remained unchanged but the variance and range of the frequency distribution is increased many fold Theoretically disruptive mating via mating unlike --leads to greater opportunity for creating heterozygosity in selfing generations, --enhance rapid crossing over and -releases latent variations which are locked up by repulsion phase of linkages.
It has been pointed out that disruptive mating is considered to be an effective plant breeding procedure as more exotic germplasm sources would be used in future plant breeding programmes for improving the direct and indirect components of yield.
Monogenic male sterility facilitated composite populations in rice (Singh and Ikehashi,1981)
Monogenic recessive malesterile IR-36 Donors of pest and disease resistance, tolerance for drought, adverse soils, and good agronomic traits
F1 all fertile
Donors of pest and disease resistance, tolerance for drought, adverse soils, and good agronomic traits
Normal F3
F3
F1
Ordinary pedigree
Composite population
Recurrent selection is primarily used to promote recombination and to increase the frequency of favourable genes for quantitatively inherited traits in population of plants. It is cyclic and in each cycle the two phase of plant breeding.
--Selection of a group of genotypes that posses favourable genes --mating among the selected genotypes to obtain genetic recombination
The obstacles to genetic recombination among alleles at closely linked loci in self fertilizing species could be eliminated by the use of male
msms
P1N F1 (MSms)
BC1F1 BC2F1 BC2F2 (6.25% msms)
3 times recombination
C0 populations (15,000 plants)
C0 populations (15,000 plants)
Recombination
Yield testing, new varieties 32 BC2F1 42 BC1F1 Guoyou Ye Single plants selection
IR36 ms/ARC10451
Step 1
IR36 ms/WC1263
Make crosses with donors Interplant F1 with IR36 ms. Coincide F1 and IR36 ms flowering. Harvest seed separately.
Step 2
BC1
F2
Mixed seed
Use all seed harvested from IR36 ms plants and about 30 g from each F1 to prepare bulk.
Grow at stem borer hot spot to coincide with peak population. Select for desired characteristics, including a number of male sterile plants. Grow under pest pressure. At maturity, select resistant plants and bulk. Select for elevated level of resistance.
Step 3
Step 4 Steps 5 - 9
Repeat steps 3 and 4 at least 2 more cycles Select fertile plants purify by pedigree method and test
Steps 10
Male sterility has a selection disadvantage in the population and its frequencies decreases to a very low value within few generations and
The effectiveness of this mechanism in promoting heterozygosis for increased crossing over would be ephemeral.
There is also some evidence that too much crossing over in selfing species can be detrimental to fitness
tropical upland japonica, lowland tropical indica, upland and irrigated tropical high altitude and irrigated temperate japonica rices. Several gene pools and populations were developed which have been used as
genetic base population for recurrent selection in different Latin American countries like Brazil, Chile and Colombia and in several African countries viz. Ivory coast, Mal, and Madagascar. In 1989, the basic gene pools CAN IRAT-4 and 5 for tropical indica irrigated and tropical japonica upland conditions were made available to the international scientific community. In 1990, at CIAT a hand crossed recurrent selection project began focusing on the development of gene pools and populations targeting blast resistance in rice (Chatel and Guimaraes, 1994). New gene pools CIRAD-CA and CNPAF developed the indica and japonica basic gene pools CAN-IRAT 4 and CAN-IRAT-5; CIRAD-CA and IRRI developed indicajaponica CPI 22L and indica CP 126 gene pools and CIAT developed the indicajaponica gene pool GC 91 by hand crossing.
Jensen (1970) proposed the diallel selective mating (DSM) system which was designed primarily for autogamous species which worked as a dynamic gene pool
This system provides
Conventional bulk population breeding for the biparental diallel crosses
Mass selection in each population series Recombination of selected genotypes Introgression of new germplasm into breeding population at any time.
DSM seems to be formidable due to large number of crosses and requirement of enough F1 seeds in each crossing cycle
Jensen (1978) suggested use of male sterility factor to facilitate crossing and growing of breeding populations in a specialized environment to maximize genotypic expression of the trait under selection.
F1(Plant) F2(Seed)
Mass selection
Diallel cross
F2(Plant)
3 F3 F3
F1(Plant) F2(Seed)
Mass selection
Selective mating
F4 F4
F3 F4 F4 F5 F5 line selection
F1 F2
Mass selection
F2 F3
F3
F4
F2
F3
End product
Physiological evidence associating stay-green with yield capacity Early senescing indica varieties with a senescence inhibition gene from Arabidopsis were transformed with extraordinary increases in photosynthetic rates and chlorophyll content which resulted --gains in tiller number, --seed set, --plant yield and biomass The flag leaves of stay-green Fedearroz 50 at grain maturity showed large advantages in --chlorophyll content, --photosynthetic rates and --nitrogen content.
is uncommon. There are many stay-green materials with poor yielding capacity and the trait must be combined with excellent plant type. Additionally, average
size panicles in a stay-green background will not confer maximum yield potential. Therefore, large panicles are required to store the increased production of carbohydrates resulting from stay-green foliage combined with superior plant
type.
Selection for the stay-green trait combined with large, erect flag leaves is a valid and potentially valuable breeding objective for increased yield potential. It is not possible to estimate at present the potential genetic advance that might accrue from this strategy, and it is hoped that genetic gain will be at least equal
that provided by heterosis. Basic studies on the inheritance of stay-green, its physiology and its relation to yield potential and other economic traits, to increase the
efficiency in breeding. Selection of parents and elite lines should be rated for leaf nitrogen at maturity,
Major constraints
Lowland rice is the major crop of the coastal region. Photosensitive varieties of maturity duration from 145 to 165 days with strong seed dormancy and plant height of 100 to more than 120 cm are grown in lowlands. Lack of suitable rice varieties with high yield, tolerance to submergence and stagnant flooding and resistance to stem borer and bacterial leaf blight, are the major constraint to high productivity in these ecologically handicapped semi deepwater and deepwater lands of the eastern India The lowland direct-seeded crop often suffers -- poor seedling establishment due to weed competition, -- early drought, or occasional submergence; -- suppressed tillering due to prolonged water stagnation; -- premature lodging and reduced light intensity; -- flash-flood submergence and postflood drought.
it was not until the mid-1990s that submergence tolerance from the FR13A-derived breeding line IR49830-7-1-2-2 was successfully introduced into productive short to intermediate stature lines
Fifty-day-old plants of these breeding populations showed prolonged submergence tolerance under greenhouse and field conditions.
Several studies suggested that it was a typical quantitative trait Molecular mapping allowed the identification of the major QTL SUBMERGENCE 1 (SUB1) on chromosome 9, contributing up to 70% of phenotypic variation in tolerance
Other minor QTLs that accounted for less than 30% of the phenotypic variation were also identified
In contrast to Sub1 rice, deepwater rice escapes stagnant partial flooding by promoting elongation of internodes Because the deepwater rice genes SK1/SK2 and the submergence tolerance gene SUB1A regulate ethylenemediated GA responsiveness in an opposing manner, it seems unlikely that they can be combined to generate genotypes resilient of both stagnant flooding and submergence. Targets that may aid in this objective include the generation of rice genotypes that combine submergence tolerance with tolerance of other abiotic and biotic stresses and grain quality attributes that match local consumers preferences. The successful combination of submergence tolerance with other traits is likely to involve recognition of landraces with trait attributes that are unraveled at the genetic and molecular levels before their return to the farmers field in improved varieties
Swarna-Sub1
IR49830
TDK-Sub1
BR11-Sub1
FR13A
FR13A
Samba Mahsuri-Sub1
IR64-Sub1
Swarna-Sub1
Ciherang-Sub1
IR 09F504
IR 09F291
IR 09F211
FR13A
S.M.-Sub1
IR64-Sub1
CR1009-Sub1
Swarna-Sub1
IR 49830
IR 09F504
Giant rice
Giant rice
Many elite lines integrating tolerance to submergence and stagnant flooding may not similar to the Giant rice, but have intermediate plant height, moderate tillering ability, well exerted long panicles, high grain number with improved fertility, long and erect flag leaf with drooping panicles, moderately stiff straw and mid-late in maturity duration. Majority of these entries have been used as parents in single and three way crosses Giant rice is a temperate Japonica variety exclusively used for livestock feeding. The name of this variety is "MOKWOO". It has very stiff and sturdy stem and the flag leaf remains green till maturity. It has long panicles bearing about 250 MB grains and has very poor panicle exertion. As it is a temperate japonica rice it should be crossed and backcrossed to an adaptable variety before its use in practical breeding programes to transfer some of its desirable traits.
IR 09 F 166
IR 09 F 171
Figu
IR 09 F 175
IR 10 F 190
A sound theoretical knowledge coupled will considerable hard work and long hours in the field are the secrets to breeding success, and this is likely to be the case for many years to come. The success and sustenance of rice breeding tells that there is no easy way to improve rice production, it demands patience, dedication, continuity and our total physical and mental commitments to field work.
My revered teachers
Dr. Das
Dr. Collard
Harvesting joy
which is a gentle reminder that life is a cycle That what is sown must be reaped
Farmers and workers. make India. Their poverty is Indias curse and crime. Their prosperity alone can make India a country fit to live in.
Mahatma Gandhi
Our salvation can only come through the farmer. Neither the lawyers, nor the doctors, nor the rich landlords are going to secure it.
Mahatma Gandhi
Plant Breeder never retires in life His stories remain untold without you all My best wishes and kind regards