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CO 2: Describe, Discuss, and compare the classification, structure and function of carbohydrates and its derivatives.
LECTURE 3 -CARBOHYDRATES
TOPICS: 1. Role & Significance of Carbohydrates 2. Monosacharides 3. Oligosacharides 4. Polysacharides 5. Glyconoconjugates
Section
Sect.1. ROLE OF CARBOHYDRATES As a major energy source for living organisms As a means of transporting energy
(glucose is a principal energy source in animal and plants) sucrose in plant tissues)
( exp:
Sect . SI NI I
Carbohydrates are the most abundant biomolecules in nature, having a direct link between solar energy and the chemical bond energy in living organisms. Source of rapid energy production Structural building blocks of cells Components of several metabolic pathways ecognition of cellular phenomena, such as cell recognition and binding (e.g., by other cells, hormones, and viruses)
CARBOHYDRATES
Carbohydrate : compounds contains H, C & O with the comp : (CH2O)n (Hydrate of carbon) Carbohydrates : Consist of sugar (saccharum) Sugars : compound that contains alcohol & carbonyl functional group
Examples:
Classification
Carbohydrate
Mono saccharide
Oligo saccharide
Poly saccharide
Glyconoconjugates
Sect2.
MO OSACHARIDES
Sect. 2. Monosacharides
Sub sections : 2.1 Properties & classification 2.2 Stereoisomers 2.3 Cyclic structure 2.4 Important Reactions 2.5 Important monosach 2.6 glycoproteins and proteoglycans 2.7 Monosaccharide derivatives
Aldotriose
Aldotetrose
Aldopentoses
Aldohexose
Ketotriose
Ketotetrose
Ketopentose
Ketohexose
the projection in which the carbohydrate backbone is drawn vertically with the carbonyl shown on the top.
D- and L- enantiomers L-
Pyranoses& Furanoses
Pyranoses: six-membered ring compounds ( resemble pyran ) Furanoses : fivemembered rings, (resemble furan)
The structure systematic names glucose & fructose become HAWORTH STRUCTURES An English chemist W. . Haworth gave a more accurate picture of carbohydrate structure. (Ref. P.205 of textbook)
1. 2. 3. 4. 5. 6.
IMPORTA T REACTIO S I MO OSACCHARIDES Details 1. Mutarotation alfa and beta forms of sugars are readily interconverted when dissolved in water 2 Oxidation and reduction in presence of oxidising agents, metal ions (Cu2+) and enzymes, monosacchs undergo several oxidation reactions e.g. Oxidation of acid; aldehyde group (R-CHO) yields aldonic acid; of terminal CH2OH (Racid; (alcohol) yields uronic acid; and of both the aldehyde and CH2OH gives aldaric acid. The carbonyl groups in both aldonic and uronic acid. can react with an OH group in the same molecule to form a cyclic lactone. ester lactone. REDUCTIO reduction of the aldehyde and ketone groups of monosacchs yield sugar alcohols (alditols) Sugar alcohols e.g.sorbitol, are used (alditols) commercially in processing foods and pharmaceuticals.
ISOMERIZATIO Monosaccharides undergo several types of isomerization e.g. D-glucose in Dalkaline solution for several hours contain D-mannose and D-fructose. The DDconversion of glucose to mannose is termed s epimerization. (p.208-9 of epimerization. (p.208Textbook). ESTERIFICATIO Free OH groups of carbohydrates react with acids to form esters. This esters. reaction can change the physical and chemical propteries of sugar. Phosphate and sulfate esters of carbohydrates [carbos] are common in nature. Phosphorylated derivatives of some carbos, formed during reactions with ATP, are important metabolic components of living cells GLYCOSIDE FORMATIO Hemiacetals and hemiketals reaction with alcohols to form the corressponding acetal or ketal (p.210 of Text).On the contrary when a cyclic hemiacetal or hemiketal form of monosaccharide reacts with alcohol, the new linkage is called glycosidic linkage and the compound glycoside [e.g. glucosides, frutosides, pyranosides]
6.
REDUCI G SUGARS All monosacchs are reducing sugars. They can be oxidised by weak oxidising agent such as Benedicts reagent Benedict's reagent is a solution of copper sulfate, sodium hydroxide, and tartaric acid.
Aqueous glucose is mixed with Benedict's reagent and heated. The reaction reduces the blue copper (II) ion to form a brick red precipitate of copper (I) oxide. Because of this, glucose is classified as a reducing sugar.
2.7.MO OSACCHARIDE DERVATIVES URO IC ACIDS formed when terminal CH2OH group of a mono sugar is oxidised
Important acids in animals D-glucuronic acid and its epimer L-iduronic acid L In liver cells glucuronic acid combines with steroids, certain drugs, and bilirubin to improve water solubility therby helping the removal of waste products from the body These acids are abundant in the connective tissue carbohydrate components.
GLYCOSIDES
Monosaccharides can be linked by glycosidic bonds
(joining of 2 hydroxyl groups of sugars by splitting out water molecule) to create larger structures. Disaccharides contain 2 monosaccharides e.g. lactose (galactose+glucose); maltose (glucose+glucose); sucrose (glucose+fructose) Oligosaccharides 3 to 12 monosaccharides units e.g. glycoproteins Polysaccharides more than 12 monosaccharides units e.g. glycogen (homopolysaccharide) having (homopolysaccharide) hundreds of sugar units; glycosaminoglycans (heteropolysaccharides) containing a number of different heteropolysaccharides) monosaccharides species.
DISACCHARIDES A D OLIGOSACCHARIDES Cnfigurations: alfa or beta ( 1,4, glycosidic bonds or linkages; other linkages 1,1; 1,2; 1,3; 1,6) Digestion aided by enzymes. Defficiency of any one enzyme causes unpleasant symptoms (fermentation) in colon (fermentation) produces gas [bloating of cramps]. Most common defficiency, an ancestoral disorder, lactose intolerance caused by reduced synthesis of lactase
Lactose intolerance
Lactose (milk sugar) in infants is hydrolyzed by intestinal enzyme lactase to its component monosacch for absorption into the bloodstream (galactose epimerized to glucose). Most adult mammals have low levels of betabetagalactosidase. Hence, much of the lactose they ingest moves to the colon, where bacterial fermentation generates large quantities of CO2, H2 and irritating organic acids. These products cause painful digestive upset known as lactose intolerance and is common in the African and Asian decent.
MALTOSE ( malt sugar) An intermediate product of starch hydrolysis; it is a disaccharide with an alfa(1,4) alfa(1,4) glycosidic linkage between two D-glucose molecules; in solution the free Danomeric carbon undergoes mutarotation resulting in an equilibrium mixture of alfa and beta maltoses; it does not occur freely in nature
SUCROSE common table sugar: cane sugar or beet sugar produced in the leaves and stems of plants; it is a disaccharide containing both alfa-glucose and beta-fructose residues alfabetalinked by alfa,beta(1,2)glycosidic bond. alfa,beta(1,2)glycosidic
CELLOBIOSE degradation product of cellulose containing two molecules of glucose linked by a beta (1,4) glycosidic bond; it does not occur freely in nature
OLIGOSACCHARIDE SUGARS
Oligosaccharides are small polymers often found attached to polypeptides in glycoproteins and some glycolipids. glycolipids. They are attached to membrane and secretory proteins found in endoplasmic reticulum and Golgi complex of various cells Two classes: -linked and O-linked O-
Section 4 POLYSACCHARIDES
4.1. Intro to Polysaccharides 4.2. Classification of Polisacharides 4.2.1. Homosacharides 4.2.2. Heteropolysacharides
4.2.1.HOMOSACCHARIDES
Found in abundance in nature Important examples: starch, glycogen, cellulose, and chitin Starch, glycogen, and cellulose all yield DDglucose when they are hydrolyzed Cellulose - primary component of plant cells Chitin principal structural component of exoskeletons of arthropods and cell walls of many fungi; yield glucose derivative -acetyl glucosamine when it is hydrolyzed.
STARCH (Homosaccharide)
A naturally abundant nutrient carbohydrate, (C6H10O5)n, found chiefly in the seeds, fruits, tubers, roots, and stem pith of plants, notably in corn, potatoes, wheat, and rice, and varying widely in appearance according to source but commonly prepared as a white amorphous tasteless powder. Any of various substances, such as natural starch, used to stiffen cloth, as in laundering. Two polysaccharides occur together in starch: amylose and amylopectin Amylose unbranched chains of D-glucose residues linked with Dalfa(1,4,)glycosidic alfa(1,4,)glycosidic bonds Amylopectin a branched polymer containing both alfa(1,4,) and alfa(1,4,) alfa(1,6) glcosidic linkages; the alfa(1,6) branch points may occur alfa(1,6) every 20-25 glucose residues to prevent helix formation 20Starch digestion begins in the mouth; alfa-amylase in the saliva alfainitiates hydrolysis of the gycosidic linkages
GLYCOGE
(Homosaccharide)
Glycogen is the storage form of glucose in animals and humans which is analogous to the starch in plants. Glycogen is synthesized and stored mainly in the liver and the muscles. Structurally, glycogen is very similar to amylopectin with alpha acetal linkages, however, it has even more branching and more glucose units are present than in amylopectin. Various samples of glycogen have been measured at 1,7001,700600,000 units of glucose. The structure of glycogen consists of long polymer chains of glucose units connected by an alpha acetal linkage. The branches are formed by linking C # 1 to a C # 6 through an acetal linkages. In glycogen, the branches occur at intervals of 8-10 glucose units, 8while in amylopectin the branches are separated by 12-20 glucose 12units.
STRUCTURE OF GLYCOGE
CELLULOSE (Homosaccharide)
Cellulose is found in plants as microfibrils (2-20 nm diameter and (2100 - 40 000 nm long). These form the structurally strong framework in the cell walls. Cellulose is mostly prepared from wood pulp Cellulose is a linear polymer of -(1 4)-D-glucopyranose units in 4C1 4)conformation. The fully equatorial conformation of -linked glucopyranose residues stabilizes the chair structure, minimizing its flexibility Cellulose has many uses as an anticake agent, emulsifier, stabilizer, dispersing agent, thickener, and gelling agent but these are generally subsidiary to its most important use of holding on to water. Water cannot penetrate crystalline cellulose but dry amorphous cellulose absorbs water becoming soft and flexible. Purified cellulose is used as the base material for a number of waterwater-soluble derivatives e.g. Methyl cellulose, carbomethycellulose
Cellulose in 3D
CELLULOSE
CHITI (Homosaccharide)
Chitin is a polymer that can be found in anything from the shells of beetlesto webs of spiders. It is present all around us, in plant and animal creatures. It is sometimes considered to be a spinoff of cellulose, cellulose, because the two are very molecularly similar. Cellulose contains a hydroxy group, and chitin contains acetamide. Chitin is unusual because it is a "natural polymer," or a combination of elements that exists naturally on earth. Usually, polymers are man-made. Crabs, beetles, worms manand mushrooms contain large amount of chitin. Chitin is a very firm material, and it help protect an insect against harm and pressure
Structure of the chitin molecule, showing two of the acetylglucosamine units that repeat to form long chains in betabeta-1,4 linkage.
CHITOSA
A spinoff of chitin that has been discovered by the market is chitosan. This is a man-made molecule that is manoften used to dye shirts and jeans in the clothing industry. Chitosan can be used within the human body to regulate diet programs, and researchers are looking into ways in which it can sure diseases. Chitin, the polysaccharide polymer from which chitosan is derived, is a cellulose-like polymer consisting mainly of celluloseacetylunbranched chains of -acetyl-D-glucosamine. Deacetylated chitin, or chitosan, is comprised of chains of D-glucosamine. When ingested, chitosan can be Dconsidered a dietary fiber.
4.2.2.HETEROPOLYSACCHARIDES Are high-molecular-weight carbohydrate high-molecularpolymers more than one kind of monosaccharide Important examples include glycosaminoglycans (GAGs) the principle components of proteoglycans and murein, a major component of bacterial cell walls.
THE SPECIFIC GAGs OF PHYSIOLOGICAL SIGNIFICANCE Hyaluronic acid Occurence : synovial fluid, ECM of loose connective tissue Hyaluronic acid is unique among the GAGs because it does not contain any sulfate and is not found covalently attached to proteins. It forms non-covalently linked complexes with nonproteoglycans in the ECM. Hyaluronic acid polymers are very large (100 10,000 kD) and can displace a large volume of water.
Dermatan sulfate (L-iduronate + Glc Ac sulfate) (LOccurence : skin, blood vessels, heart valves
Chondroitin sulfate (D-glucuronate + (DGal Ac sulfate) Occurence : cartilage, bone, heart valves ; It is the most abundant GAG.
Heparin and heparan sulfate (D-glucuronate (Dsulfate + -sulfo-D-glucosamine) sulfoHeparans have less sulfate groups than heparins Occurence : Heparin :component of intracellular granules of mast cells lining the arteries of the lungs, liver and skin Heparan sulfate : basement membranes, component of cell surfaces
MUREI (Peptidoglycan)
Peptidoglycan, Peptidoglycan, also known as murein, is a polymer consisting of murein, sugars and amino acids that forms a mesh-like layer outside the meshplasma membrane of eubacteria. eubacteria. The sugar component consists of alternating residues of -(1,4) linked -acetylglucosamine and -acetylmuramic acid residues. Attached to the -acetylmuramic acid is a peptide chain of three to five amino acids. The peptide chain can be cross-linked to the peptide chain of crossanother strand forming the 3D mesh-like layer. meshSome Archaea have a similar layer of pseudopeptidoglycan. pseudopeptidoglycan.
Peptidoglycan serves a structural role in the bacterial cell wall, wall, giving the wall shape and structural strength, as well as counteracting the osmotic pressure of the cytoplasm. cytoplasm. Peptidoglycan is also involved in binary fission during bacterial cell reproduction. The peptidoglycan layer is substantially thicker in GramGrampositive bacteria (20 to 80 nm) than in Gram-negative nm) Grambacteria (7 to 8 nm), with the attachment of the S-layer. layer. Peptidoglycan forms around 90% of the dry weight of GramGram-positive bacteria but only 10% of Gram-negative Gramstrains. In Gram-positive strains, it is important in attachment Gramroles and serotyping purposes.
5.2.glycoproteins
Glycoprotein carbohydrate chains are highly diverse. They are formed by glycosylation and classified into two groups: 1. -linked oligosaccharides 2. O-linked oligosaccharides OThe -linked oligosaccharides have a minimum of 5 sugar residues -linked attached to polypeptides by an N-glycosidic bond with a chain amide group of amino acid and asparagine O-linked oligosaccharides are generally short (1-4 sugar (1residues) O-linked are attached to polypeptides by the side chain hydroxyl group of amino acids serine or threonine in polypeptide chains or hydroxyl groups of membrane lipids
5.3.glycosylation
Glycosylation is the process or result of addition of saccharides to proteins and lipids The process plays an important role in the synthesis of membrane and secreted proteins Majority of proteins synthesized in the rough ER undergo glycosylation It is an enzyme -directed site-specific process. siteTwo types of glycosylation exist: N-linked glycosylation to the amide nitrogen of asparagine side chains and Olinked glycosylation to the hydroxy oxygen of serine and threonine side chains. Glycosylation may play a role in cell-cell adhesion (a cellmechanism employed by cells of the immune system), system), as well.
GLYCOPROTEI FU CTIO S
Types of glycoproteins: asparagine-linked carbohydrate; asparaginemucinmucin-type cabohydrate Examples: glycophorin (membrane protein, source human RBC, % carbohydrate - 60); potato lectin (lectin, carbohydrate binding proteins, source potato, % carbohydrate 50) Functions: Functions: Many glycoproteins have structural functions: constituent of the cell wall; form connective wall; tissues such as collagen; found in gastrointestinal mucus secretions; used as protective agents and lubricants ;found abundantly in the blood plasma. plasma. The human blood groups A, B, AB, and O depend on the oligosaccharide part of the glycoprotein on the surface of erythrocyte cells. The terminal monosaccharide of the glycoprotein at the nonreducing end determines blood group.
BLOOD GROUPS
TYPE A B AB O O AB TERMINAL SUGAR N-acetylgalactosamine E-D-galactose both the above neither of the above is the universal donor is the universal acceptor
Those with type AB cells, which have both A and B antigens, carry neither anti-A nor anti-B antiantiantibodies Type O individuals whose cells bear neither antigen, carry both anti-A and anti-B antibodies. antiantiTransfusion of type A blood group into a type B individual, results in an anti-A antibody- A anti- antibodyantigen reaction. This reaction clumps together (agglutinates) the transfused erythrocytes, resulting in an often fatal blockage of blood vessels
Carbohydrates and proteins by themselves serve in a vast number of biological functions,linking the two together results in a macromolecule with an extremely large number of functions. Structural: Structural: Glycoproteins are found throughout matrices. They act as receptors on cell surfaces that bring other cells and proteins (collagen) together giving strength and support to a matrix. In nerve tissue glycoproteins are abundant in gray matter and appear to be associated with synaptosomes, axons, and microsomes. Protection: Protection: Human lacrimal glands produce a glycoprotein which protects the corneal epithelium from desiccation and foreign particles. Human sweat glands secrete glycoproteins which protect the skin from the other excretory products that could harm the skin
Functions of glycoproteins (further elaborated-1) elaboratedProthrombin, thrombin, and fibrinogen are all glycoproteins that play an intricate role in the blood clotting mechanism In certain bacteria the slime layer that surrounds the outermost components of cell walls are made up of glycoproteins of high molecular weight. In addition to forming these s-layers, glycoproteins also function as sbacterial flagella. These are made up of bundles of glycoproteins protruding from the cell's surface. Their rotation provides propulsion. In plants, glycoproteins have roles in cell wall formation, tissue differentiation, & embryogenesis. Reproduction: Glycoproteins found on the surface of spermatozoa appear to increase a sperm cell's attraction for the egg by altering the electrophoretic mobility of the plasma membrane.
Adhesion: Adhesion: Glycoproteins serve to adhere cells to cells and cells to substratum. Hormones: Hormones: There are many glycoproteins that function as hormones such as human chorionic gonadotropin (HCG) which is present in human pregnancy urine. Another example is erythropoietin which regulates erythrocyte production Enzymes: Glycoprotein enzymes are of three types. These are oxidoreductases, transferases, and hydrolases.
Functions of glycoproteins (further elaborated-3) elaboratedCarriers: Carriers: Glycoproteins can bind to certain molecules and serve as vehicles of transport. They can bind to vitamins, hormones, cations, and other substances. Inhibitors: Inhibitors: Many glycoproteins in blood plasma have shown antiproteolytic activity. For example, the glycoprotein a1-antichymotrypsin inhibits chymotrypsin. a1Immunological: Immunological: The interaction of blood group substances with antibodies is determined by the glycoproteins on erythrocytes. Many immunoglobulins are actually glycoproteins. B and T cells contain surface glycoproteins that attract bacteria to these sites and bind them. In much the same manner, glycoproteins can direct phagocytosis. Because the HIV virus recognizes the receptor protein CD4, it binds to helper T cells which contain it.
CELL MEMBRA E
The cell membrane is a fluid mosaic of lipids, proteins, and carbohydrates. Membrane carbohydrates are usually branched oligosaccharides with fewer than 15 sugar units. Some of these oligosaccharides are covalently bonded to lipids, forming molecules called glycolipids. Most are covalently bonded to proteins, which are thereby glycoproteins. glycoproteins. Plants produce pectin, major component of cell wall. pectin, The oligosaccharides on the external side of the plasma membrane vary from species to species The diversity of the molecules and their location on the cell's surface enable oligosaccharides to function as markers that distinguish one cell from another.
Protein layer of cell membrane Proteins determine most of the membrane's specific functions. The plasma membrane and the membranes of the various organelles each have unique collections of proteins. For example, to date more than 50 kinds of proteins have been found in the plasma membrane of red blood cells.
5. . PR TE G Y AN
Proteoglycans represent a special class of glycoproteins that are heavily glycosylated. They consist of a core protein with one or more covalently attached glycosaminoglycan chain(s). These glycosaminoglycan (GAG) chains are long, linear carbohydrate polymers that are negatively charged under physiological conditions, due to the occurrence of sulphate and uronic acid groups. Proteoglycans can be categorised depending upon the nature of their glycosaminoglycan chains. These chains may be: 1. chondroitin sulfate and dematan sulfate 2. heparin and heparin sulfate 3. keratan sulfate
Proteoglycans can also be categorised by size. Example of large proteoglycan is aggrecan. Aggrecan, Aggrecan, is the major proteoglycan in cartilage, present in many adult tissues including blood vessels and skin. The small leucine rich repeat proteoglycans (SLRPs) include decorin, biglycan, fibromodulin and lumican. lumican.
SY THESIS OF PROTEOGLYCA S
The protein component of proteoglycans is synthesized by ribosomes and translocated into the lumen of the rough endoplasmic reticulum. reticulum. Glycosylation of the proteoglycan occurs in the Golgi apparatus in multiple enzymatic steps. First a special link tetrasaccharide is attached to a serine side chain on the core protein to serve as a primer for polysaccharide growth. Then sugars are added one at the time by glycosyl transferase. The completed proteoglycan is then exported in secretory vesicles to the extracellular matrix of the cell.
Structure of proteoglycans
The GAGs extend perpendicular from the core protein in a bottlebrushbottlebrush- like structure. The linkage of GAGs such as (heparan sulfates and chondroitin (heparan sulfates) sulfates) to the protein core involves a specific trisaccharide linker Some forms of keratan sulfates are linked to the protein core through an N-asparaginyl bond. bond. The protein cores of proteoglycans are rich in Ser and Thr residues which allows multiple GAG attachment.
FU CTIO OF PROTEOGLYCA S
Proteoglycans are a major component of the animal extracellular matrix, the 'filler' substance existing matrix, between cells in an organism. Individual functions of proteoglycans can be attributed to either the protein core or the attached GAG chain. In extracellular matrix, they form large complexes, with other proteoglycans, to hyaluronan and to fibrous matrix collagen). proteins (such as collagen). They are also involved in binding cations (such as sodium, sodium, potassium and calcium) and water, and also calcium) water, regulating the movement of molecules through the matrix. They can affect the activity and stability of proteins and signalling molecules within the matrix.
ROLE OF PROTEOGLYCANS
http://www.cryst.bbk.ac.uk/pps97/assignments/projects/emilia/Proteoglycans.HTM
GAG dependent functions can be divided into two classes: the biophysical and the biochemical. The biophysical functions depend on the unique properties of GAGs : the ability to fill the space, bind and organize water molecules and repel negatively charged molecules. Because of high viscosity and low compressibility they are ideal for a lubricating fluid in the joints. On the other hand their rigidity provides structural integrity to the cells and allows the cell migration due to providing the passageways between cells. For example the large quantities of chondroitin sulfate and keratan sulfate found on aggrecan play an important role in the hydration of cartilage. They give cartilage. the cartilage its gel-like properties and resistance to geldeformation.
SUMMARY
Monosaccharides, the simplest carbohydrates, are classified as aldoses or ketoses. The cyclic hemiacetal and hemiketal forms of monosacchs have either alfa or beta configuration at their anomeric carbon. Monosacch derivatives include aldonic acids, uronic acids, deoxy sugars, amino sugars, alfa & beta glycosides. Disaccharides simplest polysaccharides occuring as hydrolysis products of larger molecules e.g. Lactose,sucrose Oligosaccharides play important roles in determining protein structure and in cell-surface recognition cellphenomena. Oligosacchs with 3 or more sugar residues are mostly found in plants.
Summary contd. -1
POLOYSACCHARIDES consist of monosacchs linked by glycosidic bonds. Cellulose and chitin are structural polysacchs with beta(1-4) linkages that adopt rigid and beta(1extended structures. The storage polysacchs starch and glycogen consist of alfa-glycosidically linked glucose alfaresidues Glycosaminoglycans are unbranched polysacchs containing uronic acids and amino sugars that are often sulfated
glycoproteins play important roles in information transfer in living organisms. Proteoglycans are enormous molecules consisting of hyaluronate with attached core proteins that bear numerous glycosaminoglycans and oligosaccharides. Found in the extracellular matrix of tissues Bacterial cell walls are made up of peptidoglycan, peptidoglycan, a network of polysaccharide and poypeptide chains.
Summary contd.-3 contd.Glycoproteins or Glycosylated proteins may contain -linked oligosacchs attached to Asn (asparagine) or O-linked oligosacchs attached to OSer or Thr (serine or threonine) or both Different molecules of glycoproteins may contain different sequences and locations of oligosaccharides. Occur in cells in both soluble and membrane bound forms, and in extracellular fluids
E D OTES
The destiny of a nation depends on the manner in which it feeds itself. We eat to live, OT, live to eat. Lower your carbohydrate consumption, but balance it with the right amount of protein and fat.