Professional Documents
Culture Documents
CHEMISTRY OF LIFE
Elements: simplest form of a substance - cannot be broken down any further without changing what it is Atom: the actual basic unit composed of protons, neutrons, and electrons
THE ATOM
Just like cells are the basic unit of life, the ATOM is the basic unit of matter. They are very small. If placed side by side one million would stretch a distance of 1cm. The atom is made up of 3 particles.
Particle Charge
PROTON NEUTRON
ELECTRON
+ NEUTRAL
-
Electrons are not present within the atom, instead THEY REVOLVE AROUND THE NUCELUS OF THE ATOM & FORM THE ELECTRON CLOUD Draw a helium atom. Indicate where the protons, neutrons and electrons are.
NEUTRONS
+ + -
ELECTRONS
ISOTOPES
atoms of the same element that HAVE A DIFFERENT NUMBER OF NEUTRONS Some isotopes are radioactive. This means that their nuclei is unstable and will break down at a CONSTANT RATE over time. There are several practical uses for radioactive isotopes:
1. CARBON DATING 2. TRACERS 3. KILL BACTERIA / CANCER CELLS
COMPOUNDS
a substance formed by the chemical combination of 2 or more elements in definite proportions
Ex: water, salt, glucose, carbon dioxide
The cell is a COMPLEX CHEMICAL FACTORY containing some of the same elements found in the nonliving environment. carbon (C), hydrogen (H), oxygen (O), and nitrogen (N) are present in the greatest percentages
TWO TYPES OF COMPOUNDS Organic - Contain C, H, and O in some ratio (usually referred to as chemicals of life)
Carbohydrates, Proteins, Lipids, Nucleic Acids
CHEMICAL BONDS
Chemical bonds hold the atoms in a molecule together. There are 2 types of chemical bonds IONIC and COVALENT
IONIC BONDS
Occur when 1 or more electrons are TRANSFERRED from one atom to another. When an atom loses an electron it is a POSITIVE charge. When an atom gains an electron it is a NEGATIVE charge These newly charged atoms are now called IONS
Example: NaCl (SALT)
COVALENT BONDS
Occur when electrons are SHARED by atoms. These new structures that result from covalent bonds are called MOLECULES ** In general, the more chemical bonds a molecule has the more energy it contains
SHARING IS CARING!
MIXTURES
Water is not always pure. It is often found as part of a mixture. A mixture is a material composed of TWO OR MORE ELEMENTS OR COMPOUNDS THAT ARE PHYSICALLY MIXED
Ex: salt & pepper mixed, sugar and sand can be easily separated
SOLUTION
Two parts: SOLUTE SUBSTANCE THAT IS BEING DISSOLVED (SUGAR / SALT) SOLVENT - the substance in which the solute dissolves Materials that do not dissolve are known as SUSPENSIONS.
Blood is the most common example of a suspension. Cells & other particles remain in suspension.
FORMULA
The chemical symbols and numbers that compose a compound ("recipe") Structural Formula Line drawings of the compound that shows the elements in proportion and how they are bonded Molecular Formula the ACTUAL formula for a compound
C2H6O
Facts about Acids Acids turn litmus paper BLUE and usually taste SOUR. You eat acids daily (coffee, vinegar, soda, spicy foods, etc)
Facts about Bases Bases turn litmus BLUE. Bases usually feel SLIPPERY to touch and taste BITTER.
Neutralization Reactions
When an acid reacts with a base to produce a salt and water.
pH SCALE
measures degree of substance alkalinity or acidity
Ranges from 0 to 14
0 5 strong acid 6-7 neutral 8-14 strong base
The goal of the body is to maintain HOMEOSTASIS (neutrality) to do this when pH is concerned, we add weak acids & bases to prevent sharp changes in pH. These are called BUFFERS
CARBOHYDRATES
Living things use carbohydrates as a key source of ENERGY! Plants use carbohydrates for structure (CELLULOSE)
include sugars and complex carbohydrates (starches) contain the elements carbon, hydrogen, and oxygen (the hydrogen is in a 2:1 ratio to oxygen)
Polysaccharides
Formed of three or more simple sugar units Glycogen - animal starch stored in liver & muscles Cellulose - indigestible in humans - forms cell walls Starches - used as energy storage
Dehydration Synthesis
Combining simple molecules to form a more complex one with the removal of water
ex. monosaccharide + monosaccharide ----> disaccharide + water (C6H12O6 + C6H12O6 ----> C12H22O11 + H2O
Hydrolysis
Addition of WATER to a compound to SPLIT it into smaller subunits (also called chemical digestion) ex. disaccharide + H2O ---> monosaccharide + monosaccharide
C12 H22 O11 + H2 O ---> C6 H12 O6 + C6 H12 O6
Lipids (Fats)
Fats, oils, waxes, steroids Chiefly function in energy storage, protection, and insulation Contain carbon, hydrogen, and oxygen but the H:O is not in a 2:1 ratio Tend to be large molecules -- an example of a neutral lipid is below
Neutral lipids are formed from the union of one glycerol molecule and 3 fatty acids 3 fatty acids + glycerol ----> neutral fat (lipid) Fats -- found chiefly in animals Oils and waxes -- found chiefly in plants Oils are liquid at room temperature, waxes are solids Lipids along with proteins are key components of cell membranes Steroids are special lipids used to build many reproductive hormones and cholesterol
PROTEINS
contain the elements carbon, hydrogen, oxygen, and nitrogen composed of MANY amino acid subunits It is the arrangement of the amino acid that forms the primary structure of proteins. The basic amino acid form has a carboxyl group on one end, a methyl group that only has one hydrogen in the middle, and a amino group on the other end. Attached to the methyl group is a R group.
AN R GROUP IS ANY GROUP OF ATOMS THIS CHANGES THE PROPERTIES OF THE PROTEIN!
FUNCTIONAL GROUPS
There are certain groups of atoms that are frequently attached to the organic molecules we will be studying, and these are called functional groups. These are things like hydroxyl groups which form alcohols, carbonyl groups which form aldehydes or ketones, carboxyl groups which form carboxylic acids, and amino groups which form amines.
Dipeptide
formed from two amino acid subunits Formed by the process of Dehydration Synthesis amino acid + amino acid ----- dipeptide + water
Hydrolysis of a dipeptide
Breaking down of a dipeptide into amino acids dipeptide + H2O ---> aminoacid + amino acid
Polypeptide (protein)
composed of three or more amino acids linked by synthesis reactions Examples of proteins include insulin, hemoglobin, and enzymes. ** There are an extremely large number of different proteins. The bases for variability include differences in the number, kinds and sequences of amino acids in the proteins
NUCLEIC ACIDS
in all cells composed of NUCLEOTIDES store & transmit heredity/genetic information Nucleotides consist of 3 parts: 1. 5-Carbon Sugar 2. Phosphate Group 3. Nitrogenous Base
CHEMICAL REACTIONS
a process that changes one set of chemicals into another set of chemicals REACTANTS elements or compounds that enter into a chemical reaction PRODUCTS elements or compounds that are produced in a chemical reaction Chemical reactions always involve the breaking of bonds in reactants and the formation of new bonds in products.
In a reaction, energy is either TAKEN IN (ENDOTHERMIC) or GIVEN OFF (EXOTHERMIC) Can you think of an everyday example of each type of reaction?
It is thought that, in order for an enzyme to affect the rate of a reaction, the following events must take place. 1. The enzyme must form a temporary association with the substance or substances whose reaction rate it affects. These substances are known as substrates. 2. The association between enzyme and substrate is thought to form a close physical association between the molecules and is called the enzyme-substrate complex. 3. While the enzyme-substrate complex is formed, enzyme action takes place. 4. Upon completion of the reaction, the enzyme and product(s) separate. The enzyme molecule is now available to form additional complexes.
2. Temperature - strongly influences enzyme activity optimum temperature for maximum enzyme function is usually about 35-40 C. reactions proceed slowly below optimal temperatures above 45 C most enzymes are denatured (change in their shape so the enzyme active site no longer fits with the substrate and the enzyme can't function)
3. Concentrations of Enzyme and Substrate ** When there is a fixed amount of enzyme and an excess of substrate molecules -- the rate of reaction will increase to a point and then level off.